KEGG   Epinephelus lanceolatus (giant grouper): 117248792
Entry
117248792         CDS       T07331                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ely04121]
    117248792 (hltf)
   03400 DNA repair and recombination proteins [BR:ely03400]
    117248792 (hltf)
Enzymes [BR:ely01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117248792 (hltf)
Ubiquitin system [BR:ely04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117248792 (hltf)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    117248792 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 RING_XB3-XBAT31 zf-RING_5 DEAD ResIII zf-C3HC4_4 zf-ANAPC11 Prok-RING_4 HDA2-3 DUF5817 zf-rbx1 zf-Nse zf-RING_6 zf-RING_4 Peptidase_S15
Other DBs
NCBI-GeneID: 117248792
NCBI-ProteinID: XP_033469942
LinkDB
Position
22:complement(38450505..38467890)
AA seq 1011 aa
MFSRRWRFGWDRFSEVDLFTDRHETDAETLSQAIRAAASEEPDADSVLFGHMKGTVVGLR
YYTGVVNRGEMVGLVRQPQNPYDRNAVMVANIYGNQVGHIKRELAAAMAHVMDNNLAKVE
GVVHYGTNNAFNMPVMLSFWGKEENKKTVIERMARHGYKLAPGAVSVTGTSQNSYSQGVF
AVPPQKGVTTLLTAEQANCLRTDDLFYEHGLTKMAALKKRKHTQSRKAQTRKRKKENTHK
LKNAFDNLFDDLMESKEGEKQEAESVGTPLLLHQRQALSWMCARENKSTLPPFWEKRGEL
YYNTVTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNFHNGKPLPVEKCEEQSSPI
KAKTKPKMASKLEGSSSTGDSAGVSDAAAGSQCSDLPQTEVICADSADVVEIMDKPDKSS
SKGKTKATKRKPSKEAPVLLDDLDFAAALGGGASDTGFRKKKSAKKATPTQSVETAIPAS
ADDLSARTTLIICPLSVISNWLDQFEQHVHSDVKLNVYLYYGPERNRSKTFLSSQDVVIT
TYNVLSADFGNKSPLHGISWLRVVLDEGHIVRNPNAQMSKAVLELKAQRRWILSGTPIQN
GVKDLWMLLAFLRLKPFDVRDWWNRVIQRPVTQGVRAGLQNLQTLVKCITLRRTKNSELN
GRPLVSLPEKTVCVEQVELSQSEREEYELARNEGRNTIRRYVAEGSVLRNYADVLAILMR
LRQHCCHPDLLAKTSSDLGAAATPAELRERLIEKLRLVLASGSDEECSVCLDSVRLPVIT
HCAHVYCRPCIAQVISSQQETARCPLCRSEIKTSELVEFPQEEVEEETSVNSKWRTSSKV
QALMGNLLRLRHEDSSIKCLVVSQFTRFLTILETPLREHGFSFLRLDGTMSQKKRTQVIQ
EFQSSAADSPSIMLLSLKAGGVGLNLTAASRVFIMDPAWNPATEDQCIDRCHRLGQTRKV
FVTKFIVKNSVEENMVKIQRQKQDLVEKAFGSSNAKRETSRINDIKALMEL
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgttttcccgcaggtggaggtttggctgggacaggttcagtgaggtggacctgttcaca
gaccgccatgagaccgatgcagagaccctgtcccaggccatcagagctgcagcgtctgag
gagccggacgcagacagcgtgctgtttggccacatgaaaggcactgtggtcggcctcaga
tattatacaggggtggtgaatcgtggggaaatggttggtttagtgcgacagccccagaac
ccatacgaccgcaatgcagtgatggtcgccaacatttatggcaaccaagtgggtcacatc
aagcgggagctggcagcagctatggcccacgtcatggacaacaatttggccaaagtagag
ggggtggtgcactatgggacgaataacgccttcaacatgccagtgatgctttccttctgg
gggaaagaagagaacaagaaaacagtgatagaacgcatggcacgacacggttataaactg
gccccaggtgcagtcagtgtgacaggtacatcccagaattcttatagtcaaggagttttt
gcagtaccacctcaaaaaggagtgaccaccctactaactgcagagcaggcaaactgcttg
agaacagatgatctcttttacgagcatggcctgaccaaaatggcagcattgaagaaaaga
aaacacacacaaagcaggaaagcacagacaagaaagagaaaaaaagaaaacacccacaag
ctgaagaatgcgtttgacaacctctttgatgacctgatggagagtaaggaaggagagaaa
caagaagcagagtctgtgggcactcctctcctgcttcaccagaggcaggcgctgtcctgg
atgtgcgctcgagaaaacaaatctacgctgccacctttttgggagaagagaggcgagctc
tactacaacactgtcacgtgtttctctgccaaagagataccagagagagttcgtggggga
atactggcagatgacatggggctgggaaaaactctgacgaccattgctctgattctcaca
aactttcacaatggaaagcctttgcctgtggagaaatgtgaggagcagtcttcaccgata
aaagccaaaacgaaaccgaagatggcctccaaactggaaggaagcagcagtacaggcgac
agtgcaggagtgagtgatgcagcagctggctctcagtgctcagaccttcctcagacggag
gtgatctgtgctgattcggcagatgtagtggagataatggacaagccagataaaagttcg
agcaaaggaaagacgaaagctaccaagcgcaagcccagtaaagaggccccagtattgctg
gatgatctggactttgctgcagcactgggtggtggagcatcagataccggcttcaggaag
aaaaaatctgccaaaaaggccactcccacacagagtgtggaaacagcaattcctgcaagt
gcagatgacttatcagcgagaacgactctcatcatctgcccgctctctgtaatcagcaac
tggctggatcagtttgagcagcatgtgcattctgacgtgaagctaaatgtgtatctgtat
tacggcccggagcgcaacagaagcaagacctttctgtcctcccaggatgtggtgatcaca
acctacaacgtcctctctgctgactttgggaataaaagtcccctccatgggatcagttgg
ctgagggtcgtgctggacgaagggcacattgtaagaaaccctaatgcacagatgagtaag
gccgtgctcgaactaaaagctcagcggcgctggattttgtcaggtactcctatccagaat
ggtgtgaaggacctgtggatgctgctggccttcctgcgcctgaagcccttcgatgtgaga
gactggtggaatcgagtgatccagagacccgtcactcagggagtcagggctggcctgcag
aaccttcagaccctggtgaagtgcatcaccctgcggcggaccaagaacagtgagctgaat
ggccgccctctggtgtctctgcctgagaagaccgtatgtgtggagcaggtcgagctgagc
cagtcagagagagaggagtatgagctggctcgaaatgagggaagaaacaccatccgcaga
tacgtagctgaagggtcagtcttgaggaattatgctgatgtgctggccatcctgatgagg
cttcgacaacactgctgccaccctgacctgctagcaaaaacatcctcagacctgggtgct
gcagcgacacctgcagagctgcgggagcgtctaatagagaagctgcggttggtgttggcc
agtggctctgacgaggagtgctctgtgtgtctggattcagtgcgtctgcccgtcattaca
cactgtgcgcacgtttactgccggccctgcatcgcccaggttatcagctctcagcaggaa
acagcacgctgtcctctctgtcgaagtgagatcaagaccagtgagctggtggagtttcca
caggaggaagtggaggaggagaccagtgtaaactctaagtggaggacaagctccaaggtg
caggcgctgatgggaaacctgctcaggctgagacatgaagacagcagcattaaatgtttg
gtcgtctcgcagttcacacgcttcctcaccatactggagactccactcagagagcatggg
ttcagttttctgcgtttggatggcaccatgagccagaagaagaggacccaggtcatccag
gagtttcagagctctgcagccgacagcccctccatcatgcttctgtcactcaaagccgga
ggggtggggcttaacttgacggccgcctctagagtttttatcatggaccctgcctggaat
cctgctactgaggaccagtgtattgaccgctgccaccgtttgggacagacaaggaaggtc
tttgtcaccaagttcattgtcaaaaactcggtggaggagaacatggtgaagatccagagg
cagaagcaggacctggtggagaaggcttttggctcgtcaaacgctaaaagggaaacctct
cgtattaatgacatcaaagctctgatggagctgtag

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