Epinephelus lanceolatus (giant grouper): 117249024
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Entry
117249024 CDS
T07331
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117249024 (sox5)
Transcription factors [BR:
ely03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117249024 (sox5)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
117249024
NCBI-ProteinID:
XP_033470231
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All DBs
Position
23:22249608..22419446
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AA seq
788 aa
AA seq
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MLLLTRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRMEDEDSEGL
GGVIHLPLASYCGKVSPRSPPNRNLDSPPNMEQDGTKGSSLSPYPQHNATSPGKEDGGGG
GRPCSDGGSATGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKD
KLLAMGSGHIGEIKGTADSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAA
AQQGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSP
GAKQHGGSLPPQANLGTHSPPTNTHSQSDKGRSSPLPNKTKDSEGAQPLNLSAKPKASES
KSPNSPPTSPQVPAAAAGAKLGPAGSMKHSVAPSSIGGPPTRVSSIADLLSSLSSTAYLN
DHEAVTKAFAEARQMKEQLKREQQVLDAKVAAVSSLSLNNGRSDKDKAALESLSQQLKQQ
AEDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRGSAEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTC
LVDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSAGVVYPGALSMAGMPSPQMPS
EHSSMSSSPEPNANHHQNPHMAGLKGDEPRIKEEELRLDDSNGDVYDDFDYEDEEADYTS
DNENHITQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgacgagagagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccagcagacagcgaatggaggatgaggatagcgagggactg
ggcggtgtcatccacctccctctggcctcctactgcggcaaggtgtcccctcgctcgccc
cccaaccgcaacttggacagcccccccaacatggagcaggacggcactaaggggagctct
ttgagtccttacccccagcacaatgctacctcaccgggtaaagaggatggcggaggtgga
gggcggccctgcagtgacgggggctcggccacgggcaccctggggactcccgagagacgc
aagggcagtctggcagacgtggtggacacactgaagcaacgcaagatggaggagctgatc
aagaacgagccagaagaggcccccagcattgagaggctgttgtcaaaggactggaaggat
aaacttttggccatgggctcagggcacatcggagaaattaaaggtaccgcagacagcctg
gcagagaaagagcgccagctcatgggcatgattggccagttgagcagcctgagggagcag
ctcctggcggcccacgaggagcagaagaagctggctgcctcgcagatggagaagcagagg
cagcagatggaactggccaagcagcagcaggaccagattgcccggcaacagcagcagctc
ctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccagcaggtccagggccaa
ctccctccgctgatgattcccgtctttcctccagaccagaggactctggcggcggctgca
gcccagcaaggcttcctcatgccccctggcttcaactacaagcctggctgcagtgaccct
taccctctccagctcatccctacaacaatggctgctgccgccgctgccacaccaggcctg
ggacccctacaactccagcagttgtacgcagctcagctggcggccatgcaggtttccccg
ggggccaagcagcacggaggcagtctgccaccacaagccaacctgggcacacactcccca
cccaccaacacacactcacagagcgacaagggccgcagctccccgctaccaaacaagacc
aaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatccgagagc
aagtcacccaactcccccccaacttccccacaggtccctgctgctgctgctggcgccaag
ctgggccctgccggctccatgaagcacagcgtcgccccctccagcatcggaggaccacca
accagagtcagctcaatagcagacttgttgtcgtcgctttcctcaacggcctacctgaac
gaccacgaggcggtgaccaaggccttcgcagaggcccggcagatgaaggagcagctgaag
agagagcagcaggtcctggacgccaaggtcgccgccgtcagcagcctcagcctcaacaat
ggacgctccgacaaggacaaggctgccttggagagtctgagtcaacagttgaagcagcag
gcggaggacaagttcagccacgctatgctggacttcaccatgagcggagactctgacggc
tcccccagtgtgtcagactccagaatatttcgggaggctcggggtcgtggcagcgccgag
ccacacatcaagcggccaatgaacgccttcatggtttgggccaaggacgagaggagaaag
atcctccaggccttccccgacatgcacaactccaacatcagcaagatcctcggctcacgc
tggaaagccatgaccaacctggagaagcagccctactacgaggagcaggctcgcctcagc
aagcagcatctggaaaaatacccggactacaagtacaagccgcggcccaaacgcacctgc
ctggtggacggcaagaagctgcgcataggcgagtacaaggccatcatgaggtcccgcaga
caggaaatgagacagtacttcagtgtggggcagcagggccagttgccgttgtcctccgca
ggcgtggtttacccaggcgccctctccatggcggggatgccctcaccccagatgccctca
gagcactcgagcatgtccagcagcccagaacccaacgccaaccaccaccagaacccccac
atggccggcctgaagggggacgagccacgaatcaaggaggaggagctacggctggacgac
agcaacggcgacgtgtacgacgactttgactacgaggacgaagaggcagattacaccagc
gacaatgagaaccatatcacccaatag
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