Epinephelus lanceolatus (giant grouper): 117249156
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Entry
117249156 CDS
T07331
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117249156 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117249156 (dcp1b)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117249156 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
117249156 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
117249156
NCBI-ProteinID:
XP_033470453
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All DBs
Position
23:17352035..17373028
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AA seq
677 aa
AA seq
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MTATSAGSTSCLTAKGLDISLAALKRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEG
TLFIYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQHPFLLYRNARLVIHGIWFYDK
EDCQRIAQRMKILTQQEQTIAQSQGGWLSPGGGGRGGGGGGILGGLLGGGGSEAKTVDII
QMLTKARTEYDKSTSEPKEIGGSSVIYGNPNLIKPIPVKPHTQDSESAEPKPLSLATLFG
SQHQHHHSPKPDPVSPMASPGTGPSAGRATRPPVARSLKYDDTVNSGRSVTSTRGNGAVV
GCSDGGLRAVIGGQTVREDGANVVGLLPSPTTAQQQQQQQNQPQHCAAIQKLMQGQRGVG
VVGGVLQTVSESPENRLCDNSVPLEHHHHHHHLYHHHHQQHHLHHHHQQQQQLQADPIKR
LFQIQPPPPSSNPPPLQQGPCLSSQPVMDSVSCSHLQAQQGQQLFFSLSKPQAEAQHNNQ
SASTIQGTDLLHSQVNNDQVLQPLHGLSSQMPGVVSPHELLQKLQLVQQEQSLASHDPPR
LCPGLAPRFLGPTQGQGAGSVVGPVSNQTTTAGQKAALQFEVISPQRIPATVAPNLLLSP
SVFTQAKSGGVLSAVAQESCSAPSTLSRPPLQDEIRVLSRSQLQATLLHLIQSDGSFLDT
IYEAYISRLANGSSSKY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttctgcaggcagcaccagctgcctcaccgctaaaggactggacataagt
ctggctgctctgaagcgacaagacccatacatcaacaatatcgtggacgtggccagccaa
gttgccctgtatacttacaacaacagggcgaatgagtgggagaagaccgaggtggaaggc
accctttttatctacacaagactggcatctccccggcatggtttcaccattatgaacaga
ctcagtatggagaacttgacagagccaatcaccaaagacctggattttcagctccagcac
cccttcctgctgtaccgcaatgcacgattggttatccatgggatttggttctatgataag
gaggactgtcaacgcatcgcccagaggatgaagattcttacccagcaggagcagaccata
gcacagtcccagggtggatggttgtccccaggaggaggaggaagaggaggaggaggggga
ggaatacttggagggctacttggaggaggaggaagtgaagcgaaaacagtggacatcatc
cagatgttgaccaaagcacgcacagagtatgacaagtctacgtcagagccaaaggagatt
ggtggcagcagtgttatttatggaaaccctaacctgatcaagccgatacctgttaaacca
cacacacaggacagtgagagtgctgaacccaagcctctctctctggccactctttttggc
tctcaacatcaacatcaccactcacccaaacctgaccctgtctctcctatggccagtcct
gggacagggccgtcagcaggacgagccactcgccctcctgtggcccgttcactgaaatat
gatgatacagtgaactctggcagaagtgtgacctctacaagagggaacggtgccgtggtt
gggtgttcagatggagggctcagggctgtgattggaggtcagacggtcagggaagatggt
gctaatgttgtaggcttgctgccaagtcccactaccgcccagcagcagcagcagcagcag
aaccagccacagcactgcgcagccatccagaaactcatgcagggacagagaggagtcggg
gtggtcggaggagtgctccagaccgtgtccgagtcccccgagaacaggctgtgtgacaac
agcgtgcccctggagcatcaccaccaccatcaccacctgtaccatcatcatcaccagcag
caccaccttcatcatcatcaccaacagcagcagcagcttcaagctgacccaatcaagaga
cttttccaaatccagccacctcctccctcctccaaccctcctcctctgcagcagggtccc
tgtctctcctctcagcccgtgatggattctgtgtcatgttcccaccttcaagcgcaacaa
ggccagcagctgtttttcagcctatcaaaacctcaagcagaggcacagcacaacaaccag
tcagcttcaactatacagggaacagatttgctgcattctcaggtgaacaatgaccaagtc
cttcaacctttacacggtctgtcttcccagatgcctggtgtggtgtcgcctcatgaactc
ctgcaaaagctccagctggtccaacaggagcagagcctggcttcccatgacccccctcga
ctctgcccgggactggcccctcgattcctggggcccactcaaggtcaaggtgcaggctcg
gttgtaggtccagtctcaaaccagaccaccactgcaggtcaaaaggctgctctgcagttt
gaggtcatttctccacagcggataccagccactgttgcccccaacctgctcctctctccc
agcgtgttcactcaggcaaagtctggtggcgtgttgtcagcggttgcccaggagagctgc
tctgccccctcaaccttgtccagacccccactgcaggacgagatcagagttctgtccagg
agccagcttcaggccacactgctgcatctgatccagagtgacggctcattcctggacacc
atctatgaagcctacatcagccgcttagctaatggctccagcagcaagtactga
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