Epinephelus lanceolatus (giant grouper): 117249342
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Entry
117249342 CDS
T07331
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04510
Focal adhesion
ely04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117249342 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117249342 (lamb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
117249342
NCBI-ProteinID:
XP_033470825
LinkDB
All DBs
Position
23:7613509..7658124
Genome browser
AA seq
1781 aa
AA seq
DB search
MLLVIYFVTALALWCPVRAQQLPEFADVCTEGSCYPATGDLLIGRAHKLTASSTCGLKQP
ERFCIVGHLEEDTKCFMCDSREMFDEDTNQVSHTIENVVTTFAHNRLKTWWQSENGVENV
TIQLDLDAEFHFTHLIMTFKTFRPAAMVIERSMNFGKSWQVYRYFAYDCELSFPGVSTGP
MAKVDEIICDTRYSDIEPSTEGEVIFRVLDPVFHIEDPYSLRIQNMLKITNLRVKFIKLH
TLGDNLLDSRDEVTEKYYYALYDMVVRGNCFCYGHASECAPIDGASAGAEGMVHGRCVCN
HNTEGLNCERCQDFYQDSPWRPAEGRNTHACKKCECNHHSTSCHFDLAVYMTTGNRSGGV
CEDCQHNTVGRQCEQCAPFYYQHPNRDLRDPNVCEPCNCDPTGSLEGGLCDSHTDVAAGM
ISGQCRCKANVEGERCDHCRQGHHGLGQGPDGCLACTCNPLGTLPGGSTCDADTGRCFCK
RLVDGHKCDQCLPQHWGLSNDMDGCRPCDCDQGGAVNNNCDPHTGQCVCREHMFGRRCDK
VESGFYFISLDHYTYEAEDATHGPGVTVVPRPYPLDRSPTWTGMGFANVPEGAYLEFNID
NVPESMDYDILIRYEPQLPEQWEKVNVRVQRPVFNPPDYSAHCSNSIQSGDEQSISLPPG
SRHVLLVRPVCFEEGLNYTVRLTLPLYSSASEIQSPYTLIDSLVLMPRVRELDMFHGVDG
EGAWDTFQRYRCLESSQSVVKSPLTDICNDYIFSVSALLHKGAMACQCDPQGSLSTVCES
SGGQCRCRPNVVGRNCEHCAPATYLFSPSGCRSCDCDPRGAVTSFCHEATGQCECVPGAT
GRQCSHCLQGFWGFPQCRPCHCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDGYHGDPE
LGSGSHCRPCMCPDGPRSGRQFSDSCYLLANTNQLVCVCSAGYKGARCDECAPGYFGNPL
VPGGRCMPCQCNGNIDMHDPGSCDARTGACLKCLYHTEGYGCQHCRQGYYGVAATQSCRK
CMCYSVGTSPRACSSPDECQCDQHSGQCPCQPNVVGQNCDRCAPDTWNIASGMGCQRCDC
DPVHSFGSSCNEVTGQCLCKPGFGGKTCRECRELFWGNPEVKCHACDCDPRGISSEQCHR
ATGQCTCVEGVSGPRCDVCARGYQGEFPFCEPCHKCFAVWDTVVGELTNQTRRLEAQVTQ
LQTSGVTAPYKDLVNSLERNVKAVRDILESNPAAVKLEQIQELMHHITGVMSYLNGKLNT
TEETLNLLHSDANATDANLDTLTDEANQLEQSVEELRQQVYNAKNANIQGAMDTIATAHM
QSTMAELRANMSTTDPGSTVESSAAVRKATEDKLGKAQKEFERKHQRNSQKLDKLSTELE
KYDLSPLSEKTCGGAAEGDNCSGSTCGGLGCVGEDGAPQCGGEGCEGLVTTSETALKSAK
ELDKEILAAMQEVDKLSRMVWEANNRANEAKVNAMEVLIKSNRSKERVEQSNEQLRNLIK
EIRDLLTNEKADVSVIEAVANEVLALEMPTSTEKLQELTKEIKEKVGTLTSVETILSQSA
QDIQAAEMLLKEAKAASEVASNMKETADVVRAALDETERAQSIAMDAIQLAQNNTKGTLD
LLISVESETAMSELKLGNTTGRLVQLEREVGLLRQNNLEVNRLAETADWTTDQARQNAEE
AQQEFDVEVKDKLVEVEDLVEEKGDSVLQARRRADELQQEARELIMQSTSKLQRLGELES
SYEANQAILEAKAAELAELEQTVRRILEEISYKVTLYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcgttatctactttgtaacagctctggccctgtggtgtcccgtcagggcgcag
cagctgccggagttcgcggatgtttgcaccgagggcagctgctaccccgccacaggtgac
ctgctcatcggccgcgcgcacaagctcaccgcctcctccacctgcggcctgaagcagccg
gagcgcttctgcatcgtcggacacctggaggaggatacaaaatgtttcatgtgcgactcc
agagagatgttcgacgaggacaccaaccaggtcagccacaccatcgagaacgtggtcacc
accttcgcccacaaccgcctgaagacctggtggcagtcggagaacggtgtggagaatgtg
accatccagctggacctggacgctgaatttcacttcacacaccttatcatgaccttcaag
acgtttcggccggctgccatggtgatcgagcggtccatgaactttgggaagtcgtggcag
gtgtatcgctactttgcctacgactgcgagttgtccttccctggtgtgtccaccgggcca
atggccaaagtggacgaaatcatctgcgacacccgttactcagacatcgaaccatccacc
gagggagaggtgatatttcgggtgctggaccccgtcttccacattgaggacccctacagc
ctgaggatacagaacatgttgaagatcacgaacctccgggtgaagttcatcaagctccac
acgctgggcgacaacctgctcgactcgcgtgacgaggtgacggagaagtactactacgcc
ctctacgacatggtcgtccgcggcaactgcttctgctacggtcacgcctctgagtgcgcc
ccgatcgatggagcatcagcgggagctgagggcatggtccatggccgctgtgtgtgtaat
cacaacactgagggactgaactgtgaacgctgccaagacttttaccaggattcgccttgg
agacctgcagagggacgaaacacccacgcctgcaagaagtgtgaatgtaaccatcactcc
acatcgtgccacttcgaccttgctgtttacatgacgactggcaacaggagcggaggcgtg
tgtgaagactgtcagcacaacactgtgggccgacagtgcgagcagtgtgcacctttctac
taccagcacccaaaccgagacctcagggaccccaacgtctgtgagccgtgtaactgtgac
ccaaccgggtctctggagggtggactgtgtgattcgcacaccgacgtggcagccgggatg
atctcaggccagtgtcggtgcaaagccaatgtggagggtgagcgctgtgaccactgccgg
cagggacaccacggactgggacaggggcctgatggctgcctggcttgtacctgtaacccg
ctgggcactctgcccggaggaagcacctgtgatgcggacacaggaaggtgcttctgcaaa
cgcctcgtggacggacataaatgtgatcagtgtctgccgcagcactggggtctgtccaat
gacatggacggctgcagaccatgtgactgtgatcagggcggagctgtcaacaacaactgt
gaccctcacacaggacagtgtgtgtgcagggagcacatgtttggacgacgctgcgataag
gtggagtctggcttctatttcatctctctggatcactacacctacgaggcagaggatgcc
acgcacggacctggtgtgacggtggtaccgaggccgtaccctctggatcgcagtcctacg
tggaccggtatgggctttgctaatgtgccagaaggagcttacttagagttcaacatcgac
aatgtcccagagtccatggactatgacatccttattcgctatgagccgcagctgccagag
cagtgggagaaggtgaacgtccgagtgcagcgtcccgttttcaaccctccagactactcc
gctcactgcagcaactccatccagagtggagacgagcagtccatctctcttccacctgga
tccagacacgtgttgctggtgaggccggtgtgtttcgaggaaggactgaactataccgtc
cgtctcactctgcctctctactcgtcagccagtgaaatccagagcccgtacacactcatc
gactctttggtgctgatgcctcgggtcagggagctggacatgttccatggggtcgatggt
gagggagcgtgggatacgttccagcgctaccgttgtctggagagcagccagagtgtcgtc
aaaagccccttgaccgacatctgtaacgactacatcttcagcgtctctgctctgctgcac
aaaggagccatggcatgccagtgtgaccctcagggttcactcagcaccgtgtgtgagtcc
agtggaggtcagtgccggtgtcgacccaacgttgttggcagaaactgtgagcactgtgcc
ccggctacgtacctgttcagcccctctggctgcagatcttgtgactgtgacccacggggc
gcggtcacttctttctgccacgaggcgacgggtcagtgcgagtgtgttccaggggccaca
gggcgccagtgttcccactgcctgcagggcttctggggcttccctcagtgccgaccgtgc
cactgtaacggccacagtgagtactgccaccctcagaccggagagtgtcagggctgcagg
gacttcaccaccggacaccactgtgagaggtgtttggatggttaccatggtgacccagag
ctgggctcaggtagccactgccgcccctgtatgtgccccgatgggccgcgcagtggacgc
cagttttctgacagctgttaccttctggctaacacgaaccagctggtgtgtgtgtgcagc
gccggctacaaaggtgccaggtgtgatgagtgcgctcctggttatttcgggaaccctctg
gtgcctggtgggcgctgcatgccctgccagtgtaacggcaacatcgacatgcacgacccc
gggtcctgtgacgctcggacaggtgcctgtctcaagtgcctgtaccacactgagggctac
gggtgtcagcactgcagacagggttactacggcgttgctgcgactcagagctgcaggaag
tgcatgtgttactcagtgggcacctcacctcgggcctgttcgtcccctgatgagtgtcag
tgtgaccagcacagcggtcagtgtccctgccagcccaacgtggtcggtcagaactgcgac
cgctgtgcccctgatacgtggaacattgccagcgggatgggctgccagcgctgcgactgc
gaccccgtccactcctttggatcctcctgcaacgaggtcacaggacagtgcttgtgcaaa
cccggttttggtgggaagacgtgtcgagagtgcagggagctcttctgggggaatccagag
gtcaaatgtcacgcttgtgattgtgaccctcggggaatctccagcgagcagtgccatcgt
gcgaccggtcagtgcacctgtgtggaaggtgtgtccggcccacggtgtgacgtgtgtgct
aggggctaccagggagagttccccttctgtgaaccctgccataagtgcttcgccgtgtgg
gacaccgtggtcggcgagctgaccaatcaaactcgacgtctggaggcccaagtaactcag
ctccagaccagtggggtgacggcaccttataaagacttagtcaacagcctggagagaaac
gtcaaagctgtcagagacatattggagagcaaccctgcagcagtgaagctggagcagatt
caggagctgatgcatcatatcaccggtgtgatgtcttacctcaacggaaagctaaacaca
acggaggagaccttgaaccttcttcacagtgacgccaatgccaccgatgcaaacttggac
acactgactgatgaggccaaccagctggagcagagtgtcgaggagctgaggcagcaggtg
tacaacgccaagaatgccaacatccagggtgccatggacaccatcgcaaccgcacacatg
cagtctacgatggcagagctccgtgccaacatgtccaccactgatcccggaagcacagtg
gagagctcagcagcagtacgcaaagccactgaggacaaattgggcaaggctcagaaggag
tttgagcgcaagcaccaaagaaactcacagaagctggacaaactgtccaccgagctggag
aaatatgacctgtcaccgctcagtgagaagacgtgtggtggtgcagctgaaggtgacaac
tgctctggctccacctgcggcggtctgggctgtgttggcgaggacggtgcgcctcagtgt
ggcggagaaggatgcgaaggcctcgtcacgacttccgaaactgctctcaaatcagccaaa
gaactggacaaggagatcctcgcagccatgcaggaggtagacaagctctccaggatggtg
tgggaggccaacaaccgcgcaaatgaggccaaggtgaacgctatggaggtgctgatcaaa
tccaaccgcagcaaagagagagtggagcagagcaacgagcagctccgcaacctcatcaaa
gagattcgagacctactcaccaatgaaaaggcagatgtttcagtgattgaggcagtggcc
aatgaggtgttggctctggagatgccgacctcgacagagaagctgcaggagctgacgaag
gagatcaaggagaaggtcggcactttgaccagcgtggagacaatcctcagtcagagcgct
caggacatccaggctgcagagatgctgctgaaggaggccaaggctgccagtgaggtggcg
tctaacatgaaggagacggcagatgtagtgagggcagccctggatgagactgagcgtgct
cagagtatcgccatggatgccatccaactggcccagaacaacacaaaggggacgctcgac
ctgctgatctctgtggagtcggagacggccatgtcggagctgaagctcggtaacaccaca
ggtcgtctggtgcagctggagagggaggttggtttgctgagacagaacaacctggaggtg
aaccgcctggctgagacagctgactggaccactgaccaggccagacagaacgctgaggaa
gcccagcaggagtttgacgtggaggtgaaagataaattggtggaggtggaagacctggtg
gaggaaaaaggggattcggtgctgcaggcaaggagaagagcagatgaactgcagcaggag
gccagagaactgatcatgcagagcaccagcaaactgcagagactcggagagttggagagt
tcctatgaagccaaccaggcgatcctggaggccaaagctgcagagctggctgagttggag
caaaccgtccgtcggatcctggaggagatcagctacaaagtgacactgtatagtacctgt
ctgtga
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integrated database retrieval system