Epinephelus lanceolatus (giant grouper): 117249349
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Entry
117249349 CDS
T07331
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117249349 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ely03029
]
117249349 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117249349 (samm50l)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
117249349 (samm50l)
Transporters [BR:
ely02000
]
Other transporters
Pores ion channels [TC:
1
]
117249349 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
117249349
NCBI-ProteinID:
XP_033470842
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All DBs
Position
23:34924178..34946881
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AA seq
470 aa
AA seq
DB search
MGTVHAKSLDPLPMHGRDLGVHPDDLMEPPEPEQESKQEILENKDVVVQHVNIQGLGRTK
EDLLGYEISDVFHAKNLIDVMKKSHIARQKLLRLGIFKEVEVLIDTSEGSDALPNGLDVT
FEVTEIKRLTGSYNTMVGNNEGSMVLGLKLPNMLGRAEKLTFQFSYGTKETSYGLSFFKP
QPGHFERNLTLNLYKVTGQFPWSSLKETDRGASAELNFPIWMTNHTLKWEGVWRELGCLA
RSASFAVREESGHSLKSALSHTVSIDSRNSAIFPSRGALLRINQELAGYTGGDASFLKED
FELQLNRRLFWDSVLSASLWGGMLYPIGGQPSCIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGVHLYTPLPFRPGKGGFGDLFRTHFFLNAGNLCNLNYGDGPRAHLQKLA
ECIRWSYGAGIVLRLGNIARLELNYCVPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccatgctaagagtctggatcctctcccgatgcatggccgggacttgggt
gtccaccctgatgacttgatggagcctccagaaccagagcaggagtcgaagcaggagatc
ctcgaaaacaaagatgtggttgtccaacatgtcaatatccagggtcttggaagaactaaa
gaggacctgctcggttatgagatctccgatgtttttcacgccaaaaacctcatcgatgtg
atgaaaaaatctcatatcgccagacagaagttgctccgcctgggaatctttaaagaggtg
gaggttctaatcgatacatctgaaggttcggatgctctgcccaacggtctggatgtaacg
tttgaggtgacggagataaaaaggctgacaggaagctacaacaccatggttggcaacaat
gaagggagcatggtgctgggtctgaagttgcccaacatgttgggtcgagccgagaaactc
accttccagttctcctatgggaccaaggagacatcatatggcctatccttcttcaagccc
cagcctggacactttgaacgcaacctcacactcaacttgtacaaagtcaccggtcagttc
ccatggagctccttaaaagagacggacagaggagcgtctgcagaactcaattttcctatc
tggatgaccaaccacacgctaaagtgggagggtgtatggagggagctgggctgtcttgca
cgcagtgcgtcctttgctgtgcgagaggaaagtggacactcactgaaatctgccctctcg
cacactgtgtcaatcgattcgaggaattctgccatctttcccagcagaggtgccttactc
cggatcaaccaggaactggccgggtacacaggaggagacgccagcttcttgaaggaggat
tttgagctgcagctcaacagacggctcttctgggactctgtcttgtctgcttctctgtgg
ggcgggatgctttatcccatcggaggacagccatcctgcatcgctgacaggttctacctt
ggaggtcccaccagtgtacgaggatttgggatgtacagcattgggccacagagtgaaggt
gactatctgggtggagaggcgtactgggcaggtggtgtacacctctacactccactaccc
tttagaccaggcaagggcggctttggagacctttttagaacccacttcttcctcaatgca
ggcaacctctgcaacctcaactatggtgacggtccccgggcacaccttcagaagctagct
gagtgtattcgctggtcgtacggagcgggaattgttctgcggctcgggaacattgccaga
ctggagctcaactactgtgtgcccatgggagtacagagtggagacaggatatgtgacggt
gtccagtttggagcaggaatccgctttctgtga
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