Epinephelus lanceolatus (giant grouper): 117249408
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Entry
117249408 CDS
T07331
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117249408 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117249408 (cald1a)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117249408 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
117249408
NCBI-ProteinID:
XP_033470941
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Position
23:complement(25495336..25587623)
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AA seq
588 aa
AA seq
DB search
MEEMDFEQRRELRRQKREEMRLEAQRLARNDDDEEEAARERRRRARQERMKSRESEEPSG
QPDSLVMTNSHSLTETVSVSSSYGGGGGGDDDEQALLDRMAKREERRQRRMKEALERQKE
LDGANDSVATEKNNAEEERPSSWRRGRYRDNEDEEVKTETYSSRREEKEQEEPREEEEAA
PEGGEEEDEGVDEGQKEEVMEDKPRRSNLREQESTEEPKTQNKELAEDETQSVVSEISNQ
AKSEAEEDAVASEEVNERGWAREEREEQRKQNGGLHEEEEAAPKQHRKPERTPSRGSVRS
PEVSAGDDQDDAARLEAERKLEELKRRRDDAESEEFERMRQKQQEAEAELEELKRKREER
RKVLEEEERQKKQEEAERKAREEEEKRKMKEEIERRRAEAAEKRQKVEDTTDGEDRPFKC
VSPRGSSLKIGERAEFLNKSAQKSSTVKTSHSPVVSKIDNRLEQYTSAAQRENKESRSPR
SGAVDLPMVTDSIRNIKSMWEKGNVFTSPGVGGSPFKEAAVMKTGVAGRINDWLNKTPES
GKTSGGRPTDLKPVDVTNKRSLWENKGASPTKVAGRGETKSVANGMGH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcagcgccgggagctgaggaggcagaagcgcgaggagatg
cgcctggaggcccaacggttggcgaggaatgatgatgatgaggaggaggcggcccgtgag
agaaggcgcagggcacgccaggagagaatgaagagcagggagagtgaggagcccagcgga
cagccagacagtctggtcatgaccaacagccacagcctgacagagacagtgtctgtgagc
agctcttacggagggggcggcggtggagacgacgacgagcaggccctgctggatcgcatg
gccaaacgcgaagagagacggcagagacgcatgaaggaggcgttggaaagacaaaaggag
ctggacggtgccaacgacagtgtcgccacggagaagaacaacgcagaagaggagaggcca
tcctcctggcgcaggggccgttaccgagacaatgaggacgaagaggtgaagacagagaca
tacagctcgaggagagaggagaaggagcaagaggagccgagggaggaagaagaggctgct
cctgaggggggagaagaagaagatgagggtgtagatgaagggcagaaagaggaggtgatg
gaggacaaaccaagaaggtctaatttgagagaacaggaatcaacagaagaacctaaaact
cagaacaaggagctcgctgaagatgaaacacagtcagtagtcagtgagatttcaaaccag
gccaagtcagaggctgaggaggatgcagtagcgtcagaggaggtgaatgagagaggctgg
gccagggaggagagggaggagcagaggaagcagaacggaggactgcacgaggaggaggaa
gcagctcccaaacagcacaggaaacctgagaggacccccagtcgcggcagtgtgcgttcc
cccgaggtgtccgcgggtgacgaccaggacgacgctgcccgcctggaggcagagcgcaag
ctggaggagctgaagcgtcgccgtgacgacgcggagagcgaggagtttgagagaatgagg
cagaagcagcaggaggccgaagccgagctggaggagctgaagaggaagagggaggagagg
aggaaggtgctggaggaggaggagaggcagaagaagcaggaggaggcggagaggaaagcc
agagaggaggaggagaagaggaagatgaaggaggagattgaaaggaggagagcagaggca
gctgagaagaggcagaaggtggaggacactacggacggagaggacagacccttcaagtgt
gtcagccctcgtggctcctctctgaagattggagagagggcagagttcctgaacaagtcg
gcacaaaagagcagcacagtgaagacgtctcattctcctgtggtgtccaagatagacaac
aggctggagcagtacacctcagctgctcagagagagaacaaggagtctcgatccccccgc
tctggagcggtggatctacccatggtcaccgacagcatccgcaacatcaagagcatgtgg
gagaaaggcaacgtgttcacctcgcctggagttggcgggagcccattcaaggaagcagct
gtgatgaagacaggcgtggcgggccgcattaacgactggctgaataaaaccccggagagc
ggcaaaacgtcaggaggaaggccaacggacctgaaacccgttgacgtcaccaacaagagg
agtctatgggaaaacaaaggtgcctctccaaccaaggtggcaggcagaggggagaccaaa
tcagtcgccaacggtatgggacattaa
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