Epinephelus lanceolatus (giant grouper): 117249461
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Entry
117249461 CDS
T07331
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117249461 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117249461 (nup50)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117249461 (nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
SHPRH_helical-2nd
Motif
Other DBs
NCBI-GeneID:
117249461
NCBI-ProteinID:
XP_033471027
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All DBs
Position
23:3981026..3996778
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AA seq
484 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFSVASEDVLKNRAIKKAKRRNIGAEAEGSGTFKG
FKGFSLTTSAASGGSAPTAFSGFGNGGGFKGLSGLTNGNSITPSFGGFSSPAASTATPGL
TFNGPTSAKPTADITAKQTNGSTPSPTQSSSSCSSSSSSSSSSVGNKEYSRQLTALNCSV
RDWITKHVNDNPLCDLNPIFRDYERHLASIERQYGAGSADGGSEEKKQGGMLPTTATPPP
PPPSSSSSGSRSSSAAPATTALFSFGKNTTEDSTRDKSASTAAPINTGVTFNFGQKVDSS
VLGSLGSKTSTPSFSFSSSASSSQTSLFGAPGSAAPLSFSGTKTEDARPADENGDEESEE
PPKPEVKEVKEDDAFYSKKCKLFYKKDSEFKEKGVGTLHLKNTEDGKTQMIIRADTNLGN
ILLNIIVQASMPCSRLGKNNVMVVCVPNPPVDDKNPTSPVPLLIRVKTAEDADELNKILE
EKKC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgataaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccggaacgttttcagttgcaagtgaggatgtgttgaagaaccgggcgatt
aagaaggccaagcgcagaaatattggagcagaggccgagggaagtggaaccttcaaaggt
tttaaagggttttctttgaccacgtcagcagcgagcggaggctcagctccaacagcgttt
tctggttttggaaacggaggaggctttaagggcctgagcggtctgaccaacggaaatagc
atcaccccttcatttggaggtttctcatctcctgcagcatccactgctacacctggtcta
acattcaacggccccacctccgccaagcccactgctgacatcaccgccaagcagaccaat
ggctccaccccgagcccgactcaaagctcgagctcctgcagcagcagcagcagcagcagc
agcagcagtgtcggcaacaaggagtacagccggcagctcaccgctctcaactgctcggtg
cgggactggatcaccaagcacgtgaacgacaaccctctgtgtgatctcaaccccatcttc
agggattacgagcggcacctggccagcatcgagcgccagtatggagccggatctgctgat
gggggctctgaggagaagaagcagggagggatgctgccaaccacagccacccctcctcct
cctcctccctcatcttcctcctccggcagcagaagcagctcggcggctccagccaccacc
gctttgttctcctttggcaaaaacacgacagaagactcgacccgggacaaaagcgcctcc
accgctgctccgatcaacaccggtgtcacgtttaactttggtcagaaggtggacagctcg
gtcctcggctccttagggtccaaaacatctacccccagcttctccttctcctccagcgcc
tcctccagccagacctccctgtttggagctcctggatctgctgcaccgctgtccttcagc
gggacgaagaccgaagacgctcggcctgcagacgagaacggagacgaggagtcggaggag
ccgcccaaaccagaggtcaaagaggtgaaagaggacgacgccttctactcaaagaagtgt
aaactgttctacaagaaggactccgagttcaaagagaaaggagtggggactctgcacctc
aaaaacacagaagatggaaaaactcagatgatcattcgcgccgacaccaatctgggaaac
atcctgctgaacatcattgtgcaggcgtccatgccgtgctctcgattgggtaagaacaac
gtgatggtggtgtgcgtccccaacccgcccgtcgatgacaagaaccccaccagccccgtc
cccctcctgatccgggtcaagaccgccgaggacgccgacgagctcaacaagatcctggag
gagaagaaatgctga
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integrated database retrieval system
