KEGG   Epinephelus lanceolatus (giant grouper): 117249514
Entry
117249514         CDS       T07331                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ely01009]
    117249514 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ely03036]
    117249514 (kdm5a)
Enzymes [BR:ely01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117249514 (kdm5a)
Protein phosphatases and associated proteins [BR:ely01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117249514 (kdm5a)
Chromosome and associated proteins [BR:ely03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117249514 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_5 PHD_JHD1 PHD_Pygo GlgE_dom_N_S zf-PHD-like
Other DBs
NCBI-GeneID: 117249514
NCBI-ProteinID: XP_033471110
LinkDB
Position
23:complement(24483140..24502583)
AA seq 1749 aa
MSAFAEFVPPPECPVFEPSWEDFSDPLGFINKIRPIAEKTGICKIRPPEDWQPPFACDVR
NFRFTPRVQRLNELEALTRVRLNFLDQIAKFWELQGSKTRFPHVERKVLDLYQLSKIVSS
EGGFEMVCKEKRWSTVASRMGFPPGKGTGSLLRSHYERILYPYELFQSGATLTGIQRLYE
EGDDGEEVDEGVGEDATEEEEQDEEEEKEKDGEGDAVQTKERLLPERRSRRLKSERENKE
PKGLKIFGTSPKMVGLEIVSADDAFNKKQRHLKAQAFAIKMRPRKETLEVNFIDLYLCLV
CGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFGFEQAV
REYSLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDV
GSGFPVRDGKRRLLGDEEEYANSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFS
SFCWHIEDHWSYSINFLHWGEPKTWYGVPASAAEQLEAVMKKLAPELFDSQPDLLHQLVT
IMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPMGRQC
VAHYRRLHRYCVFSHEELLCKMAADPESLDVELAAAVFKEMGEMIDEETKLRQAVQEMGV
LSSEQEVFELLPDDERQCYKCKTTCFLSALTCSCSPERLVCLNHAADLCDCPLGNKCLRY
RYDLEEFPSMLYGVKTRAQSYDTWAKRVSEALAADQKNKKDLIELKVLLEDAEDRKYPEK
SLFRRLREMVKEAETCSSVAQLLLSRKQRHSSRLRSESGRNRTKLTVDELKAFVDQLYRL
PCIISQARQVKELLENVEDFHERAQVALSDEMPDSSKLQALLDLGSGLDVELPELPRLKQ
ELQQARWLDEVRVTLAEPHRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVSERWE
DKARACLQARPRHSMVTLESIVLEARNIPAYLPNILALREALQKAKEWTSKVEAIQSGSS
YAYLEQLESLLARGRSIPVRLDPLAQVESQVAAARAWRERTARTFLKKNSTYTLLQVLSP
RVDIGVYGNSKSKRKRVKELMEKERGGFDPDTLSDLEESLEEVRDPSIVVAAFKAKEQKE
VEAIHSLRAANLAKMAMADRIEEVKFCLCRKTASGFMLQCELCKDWFHGACVPLPKTGSQ
KKLGVGWQSNSKDSKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAM
SWQDRARQALATEELSSALAKLSVLSQRMVEQAAREKTEKIINAELQKAAANPDLQGHIQ
TFQQSGFSRAASPRQSVDYDDEETDSDEDIRETYGYDMKDPGEVKPYLFCDEEIPVKSEE
VVSHMWPTATPSFCAEHAYSSASKSCVQNLGTPRKQPRKTPLVPRSLEPPVLELSPQAKA
QLEELMMLGDLLEVSLDETQHIWRILQATHPPSEERFLQVMEPDDSLMEKPLKLKLKDSE
KKRKRKLERAEHHHMLMAAAAAAGGASAMGEMRPAKSKELKRVGLELGLGGKPKKKKLKL
NLEKNREMKQLAKRLAKEEKERKRKEKAAAKAEAIREGLEKRKEKKILDIPSKYDWSGAE
DSNDENAVCAAKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICMDCSRK
AAGVSGGGGGITVEEVAEESVVVLSTSMCGVQSLPAASVVASWSHTSSASHLNPATSQQQ
QQQEPQQGS
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgtctgcatttgctgagttcgtcccccctcctgaatgcccggtgtttgagccgagttgg
gaggatttctcggatcctttaggatttatcaacaagatccgacccattgcagagaaaacg
ggcatctgcaagatccgaccccctgaggactggcagcctccgttcgcctgcgacgtacgc
aacttccgcttcactcctcgagtacaaagactaaatgaacttgaggccctcactcgggtt
aggctcaactttctggatcaaatcgcaaagttctgggagctgcagggatccaagacccga
ttccctcatgtggagaggaaggttttggacctctaccagctcagcaagattgtgtcatca
gagggcggctttgagatggtgtgtaaagagaagaggtggtccacggtggccagtcggatg
ggcttcccacccgggaaaggcaccggctcactgcttcgctcccattacgagaggatcctt
tatccatatgaactcttccagtctggggccacgctgactggcatccagcggttgtatgag
gaaggagatgatggggaagaggtggatgagggagttggtgaagatgcaacggaggaagag
gagcaagatgaggaggaggagaaggagaaagatggggagggcgatgcagtgcagacgaaa
gagcggcttctgcctgagagacgctccaggcgcctcaagtctgagagggaaaacaaggag
ccaaaaggtctaaagatctttggtacaagtcccaagatggtcggcttggagattgtatca
gctgatgacgcattcaacaagaagcagcgtcacctcaaagcccaggccttcgccatcaaa
atgagaccacgcaaggagaccctggaggtcaactttattgacctctacctctgcctggtg
tgtggacggggcgatgaagaggaccggctcctgctatgtgacggctgcgacgacagctac
cacaccttctgcctgatcccacctctacaggatgtgcccaagggggactggcgctgcccg
aagtgtgttgctgaggagtgcagtaagccccgggaggcatttggcttcgagcaggcagtg
agggagtacagtctgcagagctttggagaaatggctgaccacttcaagtctgactatttc
aacatgcctgttcatatggtccccacagagctggtggagaaagagttctggcgcctggtc
agcagcatcgaggaggacgtcatcgtggagtacggagccgacatcagctccaaggatgtg
ggcagcgggtttcctgtcagggacggtaaaaggaggctgctgggagatgaagaggagtat
gccaactcaggctggaacctgaataacatgccggtgctggagcagtcggtgctcgcccac
atcaatgtggacatctcgggtatgaaagtgccctggctctatgtgggcatgtgtttctcc
tccttctgctggcacatcgaggaccactggagttattccatcaacttcctgcattggggt
gaaccgaagacttggtatggagtgccagcctctgcagcagagcagctggaggcagtaatg
aaaaagctggctccagagctgtttgactcccaacctgaccttctccatcaactggtcacc
atcatgaaccccaatatcctcatggagcatggcgttcctgtgtacaggaccaatcagtgt
gcaggcgagtttgtggtgaccttccccagagcctatcacagcggcttcaaccagggctac
aactttgcagaggccgttaacttctgcactgctgactggttacctatggggcgacagtgt
gtggcccattaccgacgcctccaccgctactgcgtcttctcccacgaggagctgctgtgc
aagatggccgccgatccagagagtctggacgtggagctggccgcggctgtcttcaaggaa
atgggagaaatgatagacgaggagacaaaactcagacaggctgtccaagaaatgggggtg
ctgtcctcagagcaggaggtgtttgaacttctacctgacgatgagcgccagtgttacaag
tgcaagacaacctgtttcctgtctgcgctgacctgctcctgcagccctgagagactggtc
tgtctcaaccatgcagcagatctctgcgactgtcctctgggcaacaagtgtctccggtat
cgctatgacctggaggagtttccgtccatgctgtatggggtgaagacgcgggctcaatct
tatgacacgtgggcaaagagggtctcagaggccttggctgccgaccagaaaaacaagaaa
gatctgattgagctcaaggttttgctggaggacgcagaggacaggaagtatcctgagaaa
tctttgttccgtcgcctgagggagatggtcaaagaggcggagacttgctcctctgtagct
cagctgctgctcagccgcaaacaaaggcacagcagccgtctgcgttctgagagcggtcgt
aaccgcaccaaactgacagtagatgagctcaaagccttcgtggatcagctgtataggctg
ccttgcatcatcagtcaggcccggcaagtcaaagagttgctggagaatgtggaggacttc
catgagcgagcccaggtagcgttgtcagacgagatgcctgattcctccaagctgcaggcg
ctgctggacctgggcagcggcctggatgtggagctgccggagctgccccgactgaagcag
gagcttcagcaggctcgctggcttgatgaggtgcgtgtcaccctggccgagcctcaccgc
gtcaccctggagctgatgaagaggttgatagactctggggtgggcctggctccccaccac
gctgtggagaaggccatggctgagctgcaggagatcctcactgtctctgagaggtgggag
gataaggcccgtgcctgcctgcaggccagacctcgacacagcatggtgaccttggagagc
attgtgctggaagcgaggaacatcccagcctaccttcctaatattttggccctcagagag
gccctacagaaggccaaggagtggacatcgaaggtggaagccattcagagtggcagtagc
tatgcttacttggagcagctggagagcctgctcgccaggggacgctccatccctgtccgg
ctcgatccacttgcccaggtggagtcacaggtggcagcagctcgagcctggagggagagg
actgctcgcacctttctcaaaaagaactccacatacacgctgctccaggtcctcagtccc
cgcgtggacattggggtctacggcaacagcaagagcaagaggaaacgggtcaaggagctc
atggagaaggagcgaggaggttttgaccccgacaccctgagcgacctggaggagagcctg
gaagaggtgcgagacccttccatcgtcgttgcagccttcaaagccaaagagcagaaagaa
gtagaggccatccactcactccgcgctgccaatttagccaagatggctatggccgaccgc
atcgaggaggtcaagttctgcctgtgtcgaaagacggccagcggcttcatgttgcagtgc
gagctttgtaaggactggttccacggagcgtgcgtgcctctgcctaagacggggtctcag
aagaagctgggtgtgggttggcagagcaatagtaaggactccaaattcctctgtccgctg
tgtcagcggtcgaggaggccgagattagagaccatcctgtcgctgctggtgtcactgcag
aagctgccggtgcgccttccagaaggagaagctctccagtgtttgacagagagggcaatg
agctggcaggaccgagcacgtcaagctctggccacggaggagctgtcctcggccctggca
aagctgtctgtgctgagccagcgcatggtggagcaggctgctcgggagaaaactgagaag
atcatcaatgctgagctgcagaaagctgctgccaaccctgacctgcagggccacatccag
actttccagcagtcaggtttcagccgagctgcatcgcctcgccagtctgtggactacgat
gacgaggagacggactcagacgaggacatcagggagacttacggttatgacatgaaggac
ccaggcgaggtgaagccctacctgttctgtgatgaggagattcctgttaagtctgaggag
gtggtcagtcacatgtggccgactgccacaccctccttctgcgccgaacacgcctactcc
tcagcctccaagtcctgcgtgcaaaacctgggcacgcccagaaagcagcccagaaagacc
cctctggtacctcgcagcctggagccgccagtgctggagctgtccccgcaggcgaaggcc
cagctggaggagctgatgatgctgggagacctgctggaggtgtccctggatgagacccag
cacatctggaggatcctgcaggccacgcaccctccctctgaggagagattcttgcaggtc
atggagcctgatgactctctcatggagaagcctctgaagctcaagctgaaggactcagag
aagaagaggaaacggaagttagaaagagccgagcaccaccacatgctgatggctgctgct
gccgctgccggcggggcttcagcaatgggtgaaatgcgaccggccaagtccaaagagctg
aaaagggtgggtctggaactgggtctagggggcaaacccaagaagaagaaactcaagctc
aaccttgagaagaaccgggagatgaagcaactggccaaacggttagccaaggaggagaag
gagaggaaaagaaaggagaaagcagcagccaaggcggaggctatcagagaggggctggag
aagaggaaggagaagaagatccttgacattccctcgaaatatgactggtccggggctgag
gactcaaacgacgagaacgcagtgtgcgctgccaagaactgccagagaccatgtaaagac
aaggtggactgggtgcagtgcgacggaggctgcgacgagtggttccaccaggtgtgcgtg
ggcgtttcctgcgaaatggccgagaacgaggactacatctgcatggactgctcccggaag
gccgcaggggtgagcggcggaggaggtgggatcaccgtggaggaggtggcagaggagagc
gtggtcgtgctgtcgacttcgatgtgcggcgtgcagagtctgccggcggcatccgtcgtg
gcctcgtggtctcacacgtcctcggcctctcatctaaacccagcaacgtcgcagcagcag
cagcagcaagagcctcagcagggcagttag

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