KEGG   Epinephelus lanceolatus (giant grouper): 117249724
Entry
117249724         CDS       T07331                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04145  Phagosome
ely04148  Efferocytosis
ely04510  Focal adhesion
ely04512  ECM-receptor interaction
ely04810  Regulation of actin cytoskeleton
ely04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ely00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    117249724 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117249724 (itgb5)
   04148 Efferocytosis
    117249724 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117249724 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117249724 (itgb5)
   04810 Regulation of actin cytoskeleton
    117249724 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ely04131]
    117249724 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ely04515]
    117249724 (itgb5)
Membrane trafficking [BR:ely04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    117249724 (itgb5)
Cell adhesion molecules [BR:ely04515]
 Integrins
  Integrin beta subunits
   117249724 (itgb5)
SSDB
Motif
Pfam: Integrin_beta EGF_integrin Integrin_b_cyt PSI_integrin EGF_2 I-EGF_1 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 117249724
NCBI-ProteinID: XP_033471309
LinkDB
Position
3:complement(2577376..2652487)
AA seq 780 aa
MWSPGTWMWRAALCCMLLETCLQPARGLNMCMSGSATSCEECLLIHPSCAWCAQEEFGRG
RTLTSRCDFIQNLHKRGCEARFVEYPTSSLSILKSRPLSSKGSGSSQYDVVQIMPQKISL
SLRPGAQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLETIRNLGTKLALEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGRCHLNEKNEYSASTQMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIVAAYNNIRSKVELSVWDHPEDISLSFTATCQDGQPLPGLRKCADL
KIGDTVSFNVSVEARSCPPRGTDQSFTIKPVGFKERLEVAVDYQCDCGCSRRAQTNSSIC
SSIGTYNCGTCHCEPGYLGARCECQEGEASSMYLSACREAEGKQICSGRGECSCNQCLCY
ESEFGKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETSSCIS
DDGQMCSGRGNCMCGRCQCTEPGAFGDTCEKCPTCPDACGTKSDETQSAEQGKGTDEPGA
VLCLYKTDNDCVMKFTYSEHASGQSILTALKEPECAAGPDALTVLLAVVGSILLVGVVLL
AAWKLVITIHDRREFARFQSARSRARYEMASNPLYKQPVTTHFVETDFNMYGKSYNGGVH
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgtggagcccggggacgtggatgtggagagcggctctgtgctgcatgctcctggaaaca
tgtctgcagcctgccagaggtctaaacatgtgtatgagcggcagcgctacgtcatgtgaa
gaatgcctcctgattcaccccagctgcgcctggtgcgcacaagaggagttcgggaggggg
cggactctgacgtcacgctgcgattttattcaaaacctgcataagaggggctgcgaggcg
cggtttgttgagtaccctaccagcagtctctccatcctgaagagcaggcctctgagctct
aaaggatctgggtcgtcccagtatgacgtggtccagatcatgcctcagaagatctccctc
agcctgcggccaggagcccagacgtggtttgggctgcaggtgcggcaggtggaggactac
ccagtggatctctactacctgatggacctctctctttccatgaaagatgatctggaaacc
atccgtaacctgggcaccaaactggccctggagatgggcaagctcaccagcaacttcagg
ctgggcttcggttccttcgtggacaaaaacatgtcgcccttctcctacacagcacccaag
tatcaggagaatccatgcaatggatacaaactgttccccaactgcgtccctaccttcggt
ttccgccacatcctctcactgacggacaaagtggaccgctttaacgaggaggtgcagaag
cagatggtgtctcgcaaccgggatgcaccagagggcggatttgatgccatcctgcaggct
gctgtttgtaaggaggagatcggttggagaaaggaggcctaccacctgctggtgttcgcc
acagacgacgtgcctcacctcgccctggatggccggctgggaggcctcgtccagccccac
gatggacgctgtcacctcaatgaaaagaacgagtacagcgcctccacacagatggattat
ccctctctggctcttctgggggagaaactggcagaaaataacatcttcctcatcttcgct
gtgacaaaacggctctacgttatttataagaactttactgcactcatacctggaaccacc
gtggaaatcctggaccaggactctaagaatgtaattcagctcatcgtggcagcttataat
aacatccgctctaaagtggagctgtcagtgtgggatcacccagaggacatcagcctttcc
ttcaccgccacctgccaggatggacagccgctgccaggcctcaggaagtgtgccgacttg
aagataggagacactgtatcgttcaatgtgagtgtggaggcgaggagctgccctccccgc
ggcaccgaccagagcttcactatcaagccggtggggttcaaagaacgtctggaggtggct
gtggattatcagtgtgactgtggctgcagccggagggcacaaaccaacagcagcatctgc
agctccatcggtacttataactgtgggacgtgtcactgtgagccgggctacctgggcgcc
cgctgtgagtgccaggagggcgaggccagcagcatgtacctcagcgcctgccgggaagcc
gagggcaagcagatctgcagcgggcgaggagagtgcagctgcaaccagtgtctctgctac
gagtcggagttcggcaagatttacggcagctactgcgagtgtgacgacttctcctgcgcc
cgacacaaaggcatcctctgctcaggtcacggagaatgtcactgtggggagtgtaaatgc
catgctggttacatcggagacaactgtaactgctctacagagacgtcgtcctgcatctca
gacgacgggcagatgtgcagcgggcgaggaaactgcatgtgcggccgctgtcagtgcacc
gagccaggagcctttggagacacctgtgagaagtgccccacctgccctgacgcctgcggc
accaaaagtgatgagacgcagtcagccgagcagggaaaaggaacggatgagcccggcgct
gtgctttgtctctataagacagacaacgactgtgtcatgaagttcacgtattctgagcac
gccagtggacaatccatcctcacagctctcaaagagccagagtgtgccgccgggcccgat
gctctgacggtgctgctcgcagtggtcggcagcatcctgctggtgggggtggtgctgctc
gctgcctggaagttggtcatcaccattcatgaccggagagagtttgcacgcttccagagt
gcacgctcacgagcccgatatgagatggcctccaaccctctgtacaagcagcctgtcacc
acacactttgtcgaaacggatttcaacatgtacgggaagtcctacaacggaggggtccac
tga

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