Epinephelus lanceolatus (giant grouper): 117249915
Help
Entry
117249915 CDS
T07331
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117249915 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117249915 (runx1)
Transcription factors [BR:
ely03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117249915 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
117249915
NCBI-ProteinID:
XP_033471666
LinkDB
All DBs
Position
24:complement(5702300..5749209)
Genome browser
AA seq
503 aa
AA seq
DB search
MNPGAFSNSGPLSWAMYLMRKGRTGSGLFDPAPGRRYTPPSTTLASGGKMAEALPLGAQE
AGGGAALVGKLRMADRGMVEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
LGDIPDGTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYQRAIKITVDGPREPRRHRQKMDEVKPGSLAFSERLTELEQLRRSSMRVTPP
HHHHHQHPANTRQSATLNSATFSSPTHAQITADSRQMQSSPSWSYDQSYPYLGQITTPSV
HTANPLSPGRSTLGDLSSRLTGPDLTAFGDPRMTLERPFTSLPSLPDSRFSDPRVHYPPT
AGAFTYAPSHNAVSNSALGITMATAMATTPAGRYHTYLPPPYPANNPHQAQNGPFQSTSS
PYHLYYSTAAGSYQFSMMAGGGGSSDSRSPPRILPPCTNASTGSSLLHPSLPNQNEIVGV
EVESSHSSSPTNMAAAEAVWRPY
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctggggcattctccaactctggccccctgtcttgggctatgtacctgatgagg
aagggacggacaggcagcggactctttgacccagcccctggccggcgttacaccccacct
tcaactaccctggcctcaggggggaagatggccgaggctctgcctctgggcgcccaggag
gccggaggtggggcggctctggtgggcaaactgcgcatggccgaccgcggcatggtggag
gtgatctcagaccacccaggtgagctggtgaagacggacagtcccaatttcctctgctcg
gtgctgcccacacactggaggtgtaacaagaccttgcccattgctttcaaggtggttgcc
ctgggcgacatccctgacggcaccctggtaacagtgatggcgggaaacgatgagaactac
tcggctgagcttcgcaacgccacggccgccatcaagaaccaagtggccaggttcaacgac
ctgcgctttgttggccgcagcggaagagggaagagcttcactctcaccatcacagtgttc
accaaccctcctcaggtggccacataccagagagccattaaaatcacagttgatgggccc
agagagccacggcgtcatcgtcagaagatggacgaggtcaaacccggctcgctggctttt
tccgagaggctaacggagctggagcagctgagacggagctcaatgagggtgacgcctcct
caccaccatcaccatcaacaccctgccaacacccgccaatcagcaacactcaactcggct
accttctccagtcccacacatgctcagataactgccgactccagacagatgcagtcgtct
ccatcttggtcctacgaccaatcatacccttaccttggccagataaccacaccctccgtc
cacacagccaaccccctctcgccaggtcgatctacgctcggtgacctttcctcacgactc
acaggtcctgacctcacagcctttggcgaccccaggatgactttagagcgacctttcacc
tccctcccctccttgcctgactcccgcttctcagacccccgtgtccactaccctccgacg
gcgggcgccttcacctacgccccctcacacaacgccgtctccaacagcgcccttggaatc
accatggcaaccgccatggcgaccactccagcggggaggtaccacacctatctgccaccc
ccctacccggcaaacaacccccaccaggctcagaacgggcccttccagtccacctcctca
ccgtatcacctgtactactccaccgctgccggctcgtaccagttctccatgatggcaggg
ggaggaggcagcagtgactcccgctccccgccgaggatcttgccaccatgcactaacgcc
tccacgggctcctcccttcttcacccgtctttgcccaatcagaatgaaatagtgggcgtg
gaggtggagtccagccacagtagctccccgactaacatggcggctgctgaagctgtctgg
agaccttactga
DBGET
integrated database retrieval system
