Epinephelus lanceolatus (giant grouper): 117249957
Help
Entry
117249957 CDS
T07331
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
ely04148
Efferocytosis
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117249957 (vps16)
04148 Efferocytosis
117249957 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117249957 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117249957 (vps16)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117249957 (vps16)
Hops complex
117249957 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
117249957
NCBI-ProteinID:
XP_033471764
LinkDB
All DBs
Position
24:1352634..1360956
Genome browser
AA seq
834 aa
AA seq
DB search
MAFITANWNPLGEAFYRKTELYEMCWNLRDGLRDSLVAAAPYGGPIALLREPHRRSPSSR
PQLEIYSASGVSIASFPWKSGPVVHLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEIPGLQGKPSCWVVL
TQDRQTKVLLSNGPDLYILDNTSCTAVCPPGLSPQAGSIVHMSVSFSYKYLALFTDTGHL
WTGSSHLQDKLSEVDTKKSTPPKQMVWCRRPKSQQPSVVLMWDRLLMVAGVCHDTIQFPI
EDHCVLVGELDGIRIISSTNQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDANTQKSLLRAASFGKCFLTDFSSDPFVTICR
ELRVLNAVRESTVGLPLTHTQFKQMTIQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLESRLSLLQSAVDEYNKAKNE
FSAKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLALGLHKQAEQLYRDFRVPDK
RYWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKYEAKKYVSKVTPEQK
VKAHLAVGDLEGAADAAIERKSDSEMGAVLSRCPASDRLLIDRLTRARATAAKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccaactggaacccgctgggagaagctttttatcgtaagacagag
ctgtatgagatgtgctggaacctgagggacggactcagagactctctggtggctgcagct
ccatacggaggacccatcgcactcctcagagaacctcacagacgttctcccagttctcgt
cctcagttagagatttattctgcatctggagtcagcattgccagcttcccgtggaagagt
ggtcctgtggttcacctgggttggacagtcagtgatgaactgttgtgtattcaggaggat
ggatcggttctgatctacgacctgtttggatccttcaagagacacttcagcatgggacag
gaagtggtccagagtcaggtgttagaagccaaagtgttccactctccttatggaacaggt
gttgccatagtaacgggctcctcccgcttcaccctggcaaccaacattgatgacctgaaa
ctccggaggttacctgagatcccaggtctacaggggaagccgtcctgctgggtcgtcctc
actcaggacagacagactaaagtcctgctgtcaaacggacctgacctctacatcctggac
aacacgtcttgcactgctgtgtgtcccccaggtcttagtccgcaggctggcagtattgtc
cacatgtctgtgtcctttagttataagtacctggctctcttcactgataccgggcacctg
tggacaggctcttcccaccttcaggacaaactgagtgaagtggacactaaaaagtccacg
cctcccaaacagatggtctggtgtcgcagaccaaagagtcagcagccctctgtggtgttg
atgtgggacagactgctcatggtggccggagtgtgtcacgataccatccagttccccata
gaggatcactgtgttttggtcggagagctggatggaattcggatcatcagctcgaccaat
caggagctgcttcaggaggtgcctctggtctgtcaggacatctttaagattgcctccatg
gctcctggagctctgctgctggaggcccacagggagtacgagaagtcgagtcagaaggct
gatgagtacctgagggagataaaggagcagagcatgctgggagaagcagtccgacagtgt
gtggaggcagcaggacacgaatatgacgccaacacccagaaatccctgctgagggcggcg
tcctttgggaagtgtttcctgacagacttcagttcggacccgttcgtgacgatctgcaga
gaactccgagtcctgaacgccgtcagggagagcaccgtggggctgccactcactcacact
caattcaaacagatgactatacaggtgctgatcgacagactggtgtatcgacagttttat
ccgttagcgatagaagtctgccgttacctgaagattccagattatcagggagtcagcaga
gtcctcaaacactgggcctcatgcaaggtgcagcagaaggacctatcagacgaggccata
gcccgagcggtgtgtgtgaaggtgggagactcacctggtgtgtcttactcacacatcgca
gccaaagcgtacgaatgtggacgcactgagctcgccatcaagttgttggactttgaggct
cggtctggagaacaagtccctctgctgttgaagatgaagaggagtcagctggctctcagt
aaagctgtggagagtggagatactgacctagtttacacggtggtgacgtacctgaagaac
gagatgaacagaggagacttcttcatgactctgaggaaccaaccggtcgcactgagtctc
tacagacagttctgtaaactgcaggaacaggagactctaaaggatctttataatcaggac
gatgatcaccaggaactcgccaactactacgtcactgccagctacagagaaaagaggtta
gaaagccgtctgtctctcctgcagagcgctgtcgacgaatacaacaaggccaagaatgag
ttctctgcaaaggccacagaggacgagatgcgtcttcttcgcttccaacgcaaactggac
gatgagaaaggggcggggctactgggactgtccctgcaggccaccatggaggctctgctg
gctttaggactccacaaacaagcagaacaactttacagagacttcagagtacctgacaaa
agatattggtggttgaagctgaagtctctggcagagaaggaggagtgggaggagttagag
aagttctcaaagagcaagaagtctcctattggctacctggcgtttgttgaagtctgcatg
aagagtaacaacaagtacgaggccaagaagtacgtttccaaggtgacgcctgagcagaag
gtcaaagctcacctggctgtcggtgatctggagggcgcggcagacgctgcaatcgaacgc
aagagcgactcagagatgggggcggtcctctccagatgccccgcctccgaccgcctcttg
attgacaggttgacccgagccagagccaccgctgccaaaaagtga
DBGET
integrated database retrieval system
