Epinephelus lanceolatus (giant grouper): 117249992
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Entry
117249992 CDS
T07331
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117249992
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117249992
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117249992
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117249992
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117249992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
117249992
NCBI-ProteinID:
XP_033471851
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Position
1:40039856..40044241
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AA seq
889 aa
AA seq
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MFNSRHPSLSKRGGIWGLCILLLYTSPLSCFANFSHAKELVYKIKEGLPRGTFIGAIGVD
LNLDFTVEPPFVFSLPQKKVSGQYVSLNNTTGELYTSATEIDRETLCPDNSEGQGCTLSL
DVFVLPQQYFQLVKVKIFIKDVNDNRPKFPVDEISMSVPENTPINARYAVEQSAVDPDLG
LYGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQINVTLHGNTTKEAHLARLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDRITGVIKLAGKIDTGTATFYKLTILANGPGCIPAVATVSVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKNVGRNQRVDCYLEGNGPFRLGPY
QLLKNEYLLETTEPLDYEKTQEYELIVVAKNARDVVIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLQATDQDSESRGEVIYLLGGDAPGIFVVDRVTGVLTVTTSLDRE
EKETYRFIVRAVDQGTPRRESIATVVVCVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREAEIEVEERPWYKGQMTEGPERYELFPCQPVLIALSVTCLGLL
FTVVTLTSYICCRRFKKQRKKRSEVEIPLKRKNDSMQVVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagcaaaagaggaggaatatggggattgtgcatc
ctcttgctttacaccagccctctttcctgttttgcaaatttcagccacgcaaaagagctg
gtctataagataaaggagggattacccagggggaccttcataggggccattggagtagac
ttaaatttggatttcactgtggagcccccctttgtgttcagtctcccgcaaaagaaggtc
agcggacagtatgtgagcctcaataacaccactggggagctttacacatctgctacggag
attgacagggagaccctctgtcctgataactcagagggacagggctgcaccctctcgctg
gatgtgtttgtgttgcctcagcagtactttcagctcgtcaaagtaaagatctttatcaag
gacgtgaatgacaacaggccaaagttccctgtggatgagatctctatgtctgtcccagaa
aacacacccatcaatgctcgttatgcggtggagcagtcggcagttgacccggacctgggt
ctttacggagtgcagacctactggcttgttaatgactttggcgtgttcacactggacgtg
gaggagaatgagggcggtgagctgacgcccttccttattgtgacagaggctttggataga
gagacccaggctgaatacatcacagacatcatcgcagaggatggagggacccctcctctg
ctcggagcagctactttaaaaattgtcatcacagatgtgaatgataactgtccccaattc
acagagtcacaaattaatgtcactctgcatgggaatacgaccaaagaggcacatttggca
cgtctgcatgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaagggacaccaggagcttgttccatttggacagaatcacaggggtgatc
aagctagcagggaaaatagacactggcactgccacgttttacaaactcaccattctggcc
aatggacctggttgtatccctgcagttgccactgtttctgtccatatcatcaaagttgtt
acaggaccccctgctgtcatacccagatacatagcaccagaaaaggatggtgtggtgaca
ataaaggagtctgagccagcgttttctccgattgctttttttacagtcaaaaacgttggc
aggaaccaaagggtggactgttacttggaagggaacggcccattcaggctcggcccctat
cagctgctcaagaacgaatacctgctggagactacagagcctttggactacgagaagaca
caggagtacgagctcattgtggttgctaagaatgctcgagatgttgtaataaagactttc
ctcaaggtgcaggtgttggatgagaatgataacgcaccggtgtttcagcagtctttggtg
gagatatcagtggaggagaacaatccaccgaatacctttctgacccagctccaagccaca
gaccaggacagcgaaagcagaggggaagtcatctatctccttggaggtgatgccccaggg
atctttgtcgtggatcgtgtgacaggcgtcctgactgtgacaacatcgctagaccgtgag
gagaaagagacgtaccggttcatagtgagagcggtagaccaggggacacccaggagggag
tcgattgcaactgtggtggtgtgcgtgcaagaccgcaatgacaacagtccacgcttcatc
aataaggacttcacgttctttgtgccagagaacttcccagggtacggtgagatcggggtc
ctctctgtgacagacgctgatgctggggagaacggttgggtggccctttccatcctcaat
ggcagtgacatcttcatgatagacacaggccgaggggctctgagggccaagacgtcactg
gaccgtgagcaacaagggacataccagctgtggattgaggccgtcgatggtggggagcct
gctctttcctgcgttactatggtgaccgtgctgttgttggatgtaaatgacaaccctccc
attgtcctcttcccccagtccaatcagtcttacatgctggtactacccaatacactacct
ggaacatcaatcacagaggtgtacgctgtggataaggatacaggcatgaatgctgtgatt
gcctatagtatcattaagaggaaaggcggcgagccggggtcattcgccattgacccagaa
actggaaatatcacattaaagagggagctcagcaaccggggcctttacagcctcctggtg
aaggtcagtgatcatggtcagcccgaaccgctttactcgacagtaatggttaacttcttt
gtcaatgaaaccgtgagcaacgagagctacatccagagcctgctgaccagagaggctgag
atagaggtagaggagaggccgtggtacaaaggccagatgacagaagggcctgagaggtat
gagttgttcccctgtcagcctgtcctcattgctctttcagtgacatgtctggggctgctc
ttcacagtcgttacactgacatcttacatatgctgcaggagatttaaaaagcagcgaaag
aaaagatcagaagtggagattcctttaaaaaggaagaatgactcgatgcaggttgtgaac
agaaagctcaggcagatctcaaacatctga
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