Epinephelus lanceolatus (giant grouper): 117250077
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Entry
117250077 CDS
T07331
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117250077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117250077
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117250077
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117250077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-C3HC4_3
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
117250077
NCBI-ProteinID:
XP_033471952
LinkDB
All DBs
Position
24:9667635..9757146
Genome browser
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCTTNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGVPLPLPLPAPHSGPNSPGEEGSNRL
ALVPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LRQALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLLEECDVLIDIIQQRRQ
IIGNKIKEGKAQRIRKLAQQISNCKQCIERSTALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTVALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QERFSSQNSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYVTFYDAVGSQHLHTFHVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGLEPDN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagaccca
ctactgctcccctgcgcccacagcctgtgcttcggctgcgcccatcgcatcctcatttcc
cactgtacaaccaacgaatctgttcagagcatcggcgccttccagtgccccacctgtaga
tatgtcatttccctgagtccggagcgtggattagaaggacttaaaaggaacgtgaccttg
caaaacattattgatagagttcagcgggcctcatcttcagctggggtgcctctaccgctg
ccactgcctgcgccccacagtgggcccaactctcccggagaagaagggagcaaccgcttg
gcgctggtcccagtcagcgctgccatgtctagtccgggcacacctcctgaaccggtccag
tgccagttctgcgaacaggacccgccgcaggacgcagtcaaaacgtgtgtgacatgtgag
gtgtcgtactgcgaggagtgcctccgagcgacgcacccaaacaagaagccgtttaccggc
caccggctcatcgagcccatgccagactcccacctcagagggctccagtgcctggagcac
gaggaggagaaggtgaacatgtactgtgtcactgatgaccagctgatctgctcgctgtgc
aagctggtgggaaggcacagagaccaccaggtggcagcactgagcgaccgctatgaaaaa
ctcaggcaagctctggactccaacctgagcaatttgatcaagaggaacaatgagctggag
tctcttatggggaaactgatccagacttgtcagcatgtagaggtgaacgcgtcccgccag
gagggcaagctcctggaggagtgtgatgtcctgattgacattattcagcagaggaggcag
atcattggcaacaagatcaaggagggcaaggcacaaaggattcggaagctcgcccaacag
atctccaactgcaagcagtgcatcgagaggtccaccgccctcatcacgcaggctgatcag
acgctgaaagaaaccgatcacgctcgcttcctgcagactgccaagagcatcaatgagagg
gtttccatggcaactgcatcgacccaagtgctgatccctgagatacacctaacggacacc
ttcgacactgttgccctggacttcaccagagagaagaagttgctggagaatctggattac
ctgacggctccgagtgctccgtgcataagggaggagttgtgcacagcttcctatgacacc
atctctgtccactggacgtctgatgatgagttcacagtggtgtcctacgagctccagtac
gccatcttcactggacagtccaacattgcaagtctgtgtaactcactggagagctggatg
attgttccaaacatcaagcagaaccactacacggtgcacggtctgcagagtggcaccaag
tatatctttgttgtcaaggccattaaccaagcgggaagcaggagcagtgagccggggact
ctgaagaccaacagccagccgttcaagctggatcccaaatctgctcacaagaagctgaag
gtgtcccacgacaacctgacagtggagcgggacgaaactacatccaagaaaggccacagc
caggagcgtttctccagccagaacagctacggtgtggttggaaacgtctacattgacagc
ggtcgtcactactgggaggctttaattggagggagcacatggtacgctgtgggtatagcc
tacaaatcagcccccaagcacgagtggatcggcaagaactcggcctcctgggtgctgtgc
cgctgcaacaactcctgggtggtccgccacaacagcaaagagctggccatcgagccctcg
ccccacctgcggcgagtcggtgtcctgttggactacgacgccggttacgtgaccttctac
gacgctgtgggctcccagcacctgcacacgttccacgtctcctttgtccagcccgtgtgc
cccgtgttcaatgtgtggaataagtgtttgacgattctcactggtctacccatccctgat
catctggagggactggagcccgacaactga
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