Epinephelus lanceolatus (giant grouper): 117250180
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Entry
117250180 CDS
T07331
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117250180 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117250180 (bard1)
04121 Ubiquitin system [BR:
ely04121
]
117250180 (bard1)
03036 Chromosome and associated proteins [BR:
ely03036
]
117250180 (bard1)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117250180 (bard1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117250180 (bard1)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117250180 (bard1)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117250180 (bard1)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
117250180 (bard1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_3
Ank_5
Ank_4
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
zf-C3HC4_3
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117250180
NCBI-ProteinID:
XP_033472117
LinkDB
All DBs
Position
14:complement(19748727..19782260)
Genome browser
AA seq
797 aa
AA seq
DB search
MDNGVTEQKKDWEKTKEAVANFRQLLLCSKCSDLMTEPVCLGVCEHMLCRSCAGPRAGDG
CAVCRSPAWVKDIQINRQLSSIVQLFCGLESLLNPMKQPAEVQTQHKSPVLKHKKNFKIW
FSPRSRKVRCMVEKPSEVAAPESTSSIEAAAAQPDTVTSQHQDLSVFNFTSSSQDSSSSC
SQKCKSENRKKRSTRKNAASRKVTVQGANRTTRKQTKQQMKKNRLEAINQQWGITEEVDA
LKEKEQPCADGARRSSKRVSFLSPAVTSDEPQPAVPQGSINELSPSRSTTRESLSVGSVT
LLNDQTQPGQKVSDSVGQHDKLPETDNPKKQDNVSPPKHSSKRSREEEKVATLETTPKRP
RASPGRRRKSQMSPAVLNPPSLASPRCDKSIKHSRGEQGDSPSVRASAGRKSPCSPGASF
GRPTTGSPAVMKRNHKGETLLHLAAIKGDVEAVKELLDQGADPNLKDNAGWTPLHEACNL
GHLAVVEVLVSRGALLNTPGYENDSPLHDAVRNSHPAIVKLLLQLGASQNVLNLHGKRPA
DYAVSVKMLEIFQEASEGIQSANASLSPSASLSVVSDCGRRDEMLVFLASKLAQPEQLQV
AKLGELLGGRMADTFSGSVSHVVVPEGHMPTTISTLLGLLAGCWVVKFSWVEACLQAGKW
IPETEHEAGEGPQRSRVNRCSLLPPLFDGCFFFLLGSFKAPPRDELTKLLREGGGQLLTR
QPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGAHKPAVVRRGKVWRAPSTWLID
CITAFRLLPVPDPQTSV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggataacggtgtcactgaacagaaaaaggattgggagaagacgaaggaggcggttgcg
aactttcgacaactgctactttgctccaaatgctcggatttaatgacggaacctgtgtgt
ctgggagtgtgcgagcatatgctgtgcaggtcttgcgccggcccccgggcaggagatggc
tgcgcggtgtgtcggagtcctgcgtgggtgaaggacatccaaatcaacaggcagctcagc
agcatcgtacagctcttctgtggtttggagtccctgcttaatcctatgaaacaaccagcc
gaggtccaaacacaacataagagccctgtccttaaacacaagaagaacttcaagatctgg
tttagcccccgtagccgcaaggtacgctgcatggtggagaagccttctgaggtcgccgca
ccggagagcacatcctctatagaagcagctgcagcacagccagacaccgtcacctctcaa
caccaggacctgtcagtttttaatttcacctcatcctcccaagactcgagctcttcttgt
tctcagaaatgcaagagtgaaaacaggaagaagaggtcaactaggaaaaacgctgccagc
aggaaggtgacggtgcaaggggccaataggaccacacgaaaacagaccaagcagcagatg
aagaagaacaggctagaggctataaaccagcagtgggggatcaccgaggaggtagatgcc
ctaaaggaaaaggagcagccctgtgcggatggggcaaggaggtccagtaaaagagtttcc
ttcctaagccctgctgtcacgtctgacgagcctcagcctgcagtgccacaggggagtatt
aatgaactcagcccgagtagaagcaccacgagggagagtctctcagtaggcagcgtcact
ctactgaatgaccaaacccagcccggtcagaaagtgtcggacagtgttggccagcatgac
aaactgcctgaaacagacaatcctaaaaagcaggataacgtatctcccccaaagcactca
tcaaaaagatccagagaggaggagaaggtcgccacgttggagaccacaccaaaaaggcca
agggcttccccaggcaggcggaggaaatcacagatgtctccagctgtcctcaaccctcca
tctttggctagccccaggtgtgataagagcatcaaacactcgagaggagagcaaggagac
agcccctctgtccgagccagtgctggtagaaaatctccctgctctcctggtgcatctttt
ggacggcccacaacagggagccctgcggttatgaagaggaaccacaagggagagaccctg
ctgcatctagctgctataaagggggatgtagaggctgtcaaggaactgctggaccagggg
gctgaccctaacctgaaagataatgctgggtggacacctctgcacgaagcatgcaacctg
ggtcacctggcggttgtggaggtgttggtctcgaggggagccctgttgaatacgcccggc
tatgaaaatgactcaccgctccacgatgccgtgaggaacagtcacccagccatcgtgaaa
ctgctgctgcagctcggagcctcgcagaatgtacttaatctgcatggaaagcggcctgca
gattacgcagtgagtgtgaagatgctggagattttccaggaagcctcagaaggaatccaa
agtgctaacgcatctctgagcccctcagccagtctatctgtggtgagcgactgtgggagg
agggatgaaatgttggtgtttttggccagcaagctggcacagccagaacagctccaagtg
gccaaactgggagagctactgggaggaaggatggcggacaccttttctggctcagtgagc
catgtcgtggtgccagaaggacacatgcccaccaccatctccaccctcctgggtcttctt
gctggctgctgggttgtcaaattcagctgggtggaggcatgtctgcaggcaggcaagtgg
atacccgaaaccgagcacgaagcgggagaaggcccccagcgcagtcgtgtcaacagatgt
agcttgctcccaccgctcttcgatggctgtttcttcttcctgctcggctcctttaaggcg
cctcccagagacgagctcaccaagctgctccgggaaggaggaggtcaactcctgacccgg
cagcccaagcccgacagcgatgtgacgcagaccctgagtgccgccgcataccatgcgctg
ccaggctctgaccaggccctctgcacgcagtacatcatctttgacccccagggagctcac
aagccagcagtagtgaggcgaggtaaggtgtggcgggctccttctacctggcttatcgac
tgcatcacagccttccgcctcctccccgtgccggaccctcaaacatcagtctaa
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