Epinephelus lanceolatus (giant grouper): 117250530
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Entry
117250530 CDS
T07331
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117250530 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117250530 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
FctA
DUF5783
DUF4577
TMEM154
Motif
Other DBs
NCBI-GeneID:
117250530
NCBI-ProteinID:
XP_033472444
LinkDB
All DBs
Position
3:complement(19450731..19454875)
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AA seq
993 aa
AA seq
DB search
MRLLTEGKITTKMIRGKCLTYWHRWIFIFSIHQFLFASLAQSEGNTIRYQTNEEDAPGTV
IGNLAKDMSLSLSHSSKTNFRMMKQFNDSFIRVRESDGELTVGERIDRERICRHTLQCLI
TFDVVNFSKDRYKLIHAEVEIKDINDNSPEFPNKESIVEISENAAVGSRIPLDPAADADV
GSNYIQSYQISVNSHFTIDVLLRADGVKYAELVLMKELDRETQSSYTVELVATDGGNPYR
SGSTKITIKVTDFNDNSPVFDQNSFSVSLPEDAPVGAVILDLNAVDADEGLNGEVVYGFG
KQVSHEIRELFQVDNKSGRLTLRSPVDFEDKSTYELDVQATDLGPNPTPSVCKIIIHVTD
INDNAPEISITPMTSITTGIAYISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFK
LRQAYEDSYMIVTAAVLDRERISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFT
KAVYEVSVVENNAPGAYITTVEASDADLGINGKITYRLVDSVIMGSPVNTFVSLNAVSGS
IYALRSFNYEVMKLLDIHIQASDGGSPQLQSTAVIRLKIVDQNDNQPSITEPPLFKGSAE
VFLPKDAPAGYVVTQIKATDADEGINAQLSYKITEGGHLGFSINKDTGKVHVSRQLTYDL
TDNVKVTVSVSDNGSPALTSTAIIHFSFIEGTLPSMPSLAQNGSEELFEWDMSIAIIIVL
AGSCSLLLLAIILITTICSRRKKETREGGYDEKEDIPNVEKVESGHVDSLIANHKGKVFD
AHPFPEKPPLASSNTTETGCEDGRQTAGIFESNSRVMEGKLKQGYSTLPGYGKETVRPIT
IWKGNSFTTISARDPHISGKDSGKGDSDFNDSDSDISGDVHKKESPPTNSLWACTSECKV
LGHSDRCWSPSATRPNTSMACGPHLSTFNKTASLPRNTGRENYYPALLPKTNGLQSVYEK
VQHQEFDYILVGPPTPARIQETDEVSIPEYTNS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcttaccgagggaaagattactacgaagatgatacggggcaaatgtctaact
tattggcaccggtggatttttatattctccatccatcagtttttatttgcctcactggct
cagtccgagggaaatactattcgataccagaccaatgaggaggacgcaccaggtacagtc
atcggaaaccttgccaaggacatgtccttgagtctgtctcattcctccaagaccaatttc
aggatgatgaaacaattcaatgattcattcatcagggtgagagaaagcgacggggaactc
actgtcggggaacgaattgacagggagagaatctgcagacacactctacagtgtctcatc
acttttgacgtggtaaatttctctaaagaccgctacaaattgattcacgccgaggtggaa
ataaaggacattaatgacaactctccggagtttccaaacaaggaatctatagtggagatc
tccgagaacgcagcagtgggctcccgcatccctttggacccggctgcagacgcagatgtg
gggtcaaactacatccaaagctatcaaatttctgtcaacagtcacttcaccattgatgtg
ctcctgagagccgatggggttaaatatgcggaattggtgctaatgaaagagctagacagg
gagactcagtcatcatacactgtggagctggttgccacagacggagggaacccttacaga
tcagggtcaacaaaaataactattaaagtgactgactttaatgacaatagtcctgttttt
gaccagaatagtttctcagtcagtttaccagaggacgcaccggtgggcgctgtgatactg
gacttaaacgcagttgatgctgatgagggtctgaacggagaggtcgtctacgggttcggg
aaacaggtttctcatgagatccgagaacttttccaagtggataataaatcaggtcgcctg
acgctcaggagccctgtggattttgaggacaaaagcacatatgagctagatgtgcaggcg
accgatctgggacccaacccgaccccctccgtgtgcaaaatcataattcacgtcacagac
attaatgacaatgccccagaaattagcatcaccccgatgacctccatcacgacgggcatt
gcatacatcagcgaggcggcagacaaggacagtctggtggcgctgatcagcaccttggac
agagactcgggtgtgaacagccaggtccactgcacactgtacggccacgaccactttaaa
ctccggcaggcttacgaggacagctacatgatagttacagctgcggtcctagacagagag
aggattagtgagtataacttgacggtcatggctgaggattttgggtcacctccgctgaga
aagatcacccagtacaccattagactcagcgacgagaacgacaacgcccctcactttacc
aaagctgtctatgaagtttcagtggtggaaaacaacgccccgggcgcttacatcaccaca
gttgaggccagcgacgcggatctgggcataaatggcaaaatcacttacagacttgtggac
agtgttatcatgggctccccagtgaacacctttgtgtctctcaatgcagtgtctggctcc
atatatgcactgaggagttttaattatgaagtgatgaaactgctagacatacacatccaa
gcgagtgacggggggtcaccacagctgcagagcacagctgtcatcagactaaaaatagtt
gatcagaatgacaaccaaccttctatcaccgagccaccccttttcaaaggatctgctgag
gttttcctgcccaaagatgcacctgcaggttatgtggtaacccagataaaggccacagat
gctgatgaaggcataaatgcacagctgtcctataaaatcaccgaggggggacacctgggt
ttctctatcaacaaagacacagggaaggtgcacgtgagcagacagctgacgtatgatctc
acagacaatgtcaaagtcacagtgtcggtcagtgacaatggatcccctgcgctcacatcc
acagccattatacacttcagcttcatagaaggaactctacccagtatgccttctttggct
caaaatggcagcgaggagctctttgaatgggacatgtccattgccataatcattgtcctg
gcagggagctgctctctcctcctgctggctatcattctcatcacaaccatttgcagccgc
cggaaaaaagagacaagggagggagggtatgatgaaaaagaagacataccaaatgtggag
aaagtggaaagtggtcatgttgattcattgattgccaaccacaaagggaaagtgtttgat
gcccatccatttccagagaaacctccgttggccagcagcaacacaacagagaccggctgt
gaggatggcaggcagacagcaggcatctttgagtcaaacagcagggtgatggagggtaaa
ttgaagcagggttactccacgctgccgggatatgggaaagagactgtcagaccaataaca
atatggaagggtaattcattcacgaccatctcagcgagagatcctcacatcagcggcaag
gacagtggcaaaggggacagcgacttcaatgacagtgattctgacataagtggagatgtg
cacaaaaaggaatcgccaccaacaaacagtctctgggcatgtacaagcgagtgcaaagtg
ctgggacactcggaccgatgctggagcccttcggctacaaggcccaacacgagcatggcc
tgcggaccgcatctgtcaacattcaacaagacagcttcacttccccggaacaccggaagg
gaaaactactacccagctctcttacccaaaaccaatggtctgcaaagcgtgtacgaaaaa
gtccaacatcaggaatttgattacatactcgtcggccctccgacgccggccagaatacag
gaaacagacgaggtgtcaattccagagtacacaaactcttaa
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