Epinephelus lanceolatus (giant grouper): 117250792
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Entry
117250792 CDS
T07331
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
117250792
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ely01009
]
117250792
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ely04515
]
117250792
Protein phosphatases and associated proteins [BR:
ely01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117250792
Cell adhesion molecules [BR:
ely04515
]
Cadherins
Protocadherins
117250792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
117250792
NCBI-ProteinID:
XP_033473206
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All DBs
Position
1:complement(35429633..35751520)
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AA seq
1236 aa
AA seq
DB search
MDLKDYYLLGALLACIWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNRPVFKESQIEVHIPENSPIGTSVVQLQATDADIGANAEIRYVFGTQVSPATKR
LFALNTTSGLITVQRLLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
VTARDNGTPPLQTQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPAVTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFDWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPMHTRQQGTLTRART
ELNPEYLDLRPRAELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGSLL
TQPLPLVQAQDDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSD
NCWMPPTLGTYQQPKSPVSSFGSQREWGPKEKLLNGHTLTRTWKNESGRSEHFGDRKQFG
SGEGHFTSSGMADIPLVSLKSCQPASCPDSPKDQQL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgttgggtgccctacttgcctgcatatggctcgatccc
tcaatagcccaagagctaatctaccccatcagagaggagttgcaggaaaatgtcctcatt
ggaaacataccaaaggacctaaacatttcccatacaaatgctgccaccggagcaagtgct
aatctcgtgtaccggctcgtctccaaagcaggagataacccactggtccgtgttctgagc
agcacaggcgagatattcacaacatcaaaccgaatcgacagggagaagttgtgccccggt
ccctcgtttgaggacagcgagtgctcctttgaaattgaagtggtcatcctgcctaatgat
tatttcaggctgattaagatcaaaataattgtcaaagacacaaacgataatgcccccatg
ttcccgtcccctgtgatcaacatctccatccccgagaacacgctcattaacagccgattt
gctattccttctgccactgacccagacactggccccaacagtgtccacaaatacgagctg
atcaacgggcagagtgccttcggcttagacatagttgaaacgcctgagggggagaagtgg
ccccagctcattgtgcagcagaatctggacagagagcagaaggatacatatgtgatgaag
atcaaagtggaggatggtggcagtccacagaaatccagcactgccattctccaagtcaca
gtcacggatgtcaacgataacagaccggtgtttaaagagagtcagatagaagtgcatata
ccagagaactcccctattggcacgtctgttgtgcagctccaggccacagatgcagacata
ggggcaaatgcagagatacgctacgtatttgggactcaggtgtctcctgcaacgaaaaga
ctctttgcattaaacacaacatctggcctaattacagtgcagaggctcctggacagagag
gagactgcaattcataagctctctgttttagccagtgatggcagctccagtccagccaga
gccactgttaccataaatgtgactgatgttaatgacaatccacctaatatagacctgaga
tacataatcagtcccattaatgggactgttttcctctcggagaaggatcccatcaatacc
aagatagctctcatcacagtgtcagacaaagacactgacatcaacggcaaggtcatttgt
tttatagagaaggatgtgcccttccatctcaaggccgtgtacgataaccagtatctctta
gagacatctgcgctgcttgactacgaagggaccaaggaatacaactttaaaattgtagcg
tctgactctgggaagccgagcttgaatcagactgctttggtaagagtgaggctggaggat
gagaatgacaacccgcctatttttactcagccagttattgagctggctgttatggagaac
aacaaacgcgacctgttcctcactactctcagcgccacggatgaggacagtgggaaaaac
gctgagatagtttatcagctgggacccaatgcatcattcttcgatctcgaccgcaaaacg
ggggtcctgactgcatccagggtttttgaccgggaggatcaggataggtttctcttcact
gtaacggcgagagataacgggacaccccctctgcaaacgcaggcagccgtcattgtaact
gtgctggatgaaaacgataacaaccccaagttcacacacaaccactttcagttctttgtg
tcggagaatcttcctaaatacagcactgtgggggtgataactgtgacagattcggatgcc
ggtgaaaatgctgctgtttctctttccatactgaatgacaatgagaactttatactggat
ccttactctggggtgataaaatctaatgtgtcatttgatagggagcagcagagctcctac
acttttgatgtcagagctgtggacagcggcaggcctccttgctcctcggccgccaaggtg
accatcaatgtcatcgatgtgaacgacaacacccccattgtcatctaccccccctctaac
acatctttcaagctcgtcccactctcctctatcccaggatctgtggttgcagaggtgttt
gctgtagacggtgatacagggatgaacgctgaactcaaatacaccatcgtgagtgggaat
aacaaaggtctgttcagaattgaccctgtcacagggaatattactctggaggaaaaacca
gcagtgactgacataggcttacacagattagtggtcaatatcagtgacctgggatatcct
aaatccctccatacgctcgtgctggtatttctatatgtcaatgacactgtgggtaactct
acactcatctatgatctcatccgacgcactatggagaccccaattgaccgaaacattggc
gaaagcagtgaaacttatcaaagcggtgactatttaactataatgatagcctttgttacc
ggcgccttagtggtgattattgtcatctttgtcactgtgctcctgcgctgccgccacgct
tccaggttcaaagctgcacagaggaaaaaacagggggcggagtggatgtcacccaacaca
gagaacaagcagaacaagaagaaaaagcgcaagaaaaggaaatcccctaaaagctccctg
ctcaactttgtcaccatcgaggggaacaaacctgacgatcctgcccacgagccgatcaac
ggaaccatcagtctgcccaccgagctggaggagcaagggattggacgctttgattggaat
gccacacccaccacaaccttcaaacccagcagcccagacctggcccggcactacaagtcc
gcctcaccgcaatcggccttccacctcaaggccgacacgccggtctcggtgaagaagcat
cacgtgattcaggagctcccattggataacacatttgttgggggctgtgacacgctttcc
aagaggtcctccacgagctccgaccacttcagtgcctcagagtgcagctcccaaggaggg
ttcaagacgaaggggcccatgcacaccagacagcagggaactttaactcgtgcccgaact
gaactgaatcctgaatatctggacctccgtccgcgagccgagctgaaccctgaatattgg
accccttgcacccctttatcgcagcggcgcgtcacgtttcacctgccggatggctctcag
gagagctgcagtgacagcggtctgggggaccacgagcctgtaggcagtggctccctcctc
acacaacctctccctctggtgcaggcgcaggacgacttctacgagcaggcctcccctgat
aagaggactgaagctgacggcaactccgaccccaactctgatggccccctgggacctcgt
ggtctagtggaagctacagagatgtgcacacaggaatgcctagtcctgggacattcagac
aactgctggatgcccccgacgttaggaacataccagcagcccaaatcaccagtgtctagc
tttgggtctcagagggagtggggtcccaaggaaaaacttctcaatggacatactctgacc
agaacctggaaaaatgagagtgggcggtcagagcattttggtgacaggaagcagtttggg
agcggagagggacacttcaccagcagtggcatggctgatattccactggtgagtctgaag
tcctgccagccagcctcctgcccagacagcccaaaggaccagcagctataa
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