Epinephelus lanceolatus (giant grouper): 117251062
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Entry
117251062 CDS
T07331
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117251062
04091 Lectins [BR:
ely04091
]
117251062
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117251062
Lectins [BR:
ely04091
]
C-Type lectins
Others
117251062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
117251062
NCBI-ProteinID:
XP_033472921
LinkDB
All DBs
Position
3:complement(32932695..32993534)
Genome browser
AA seq
2219 aa
AA seq
DB search
MCWTFVHLMILMTLTCLSNAEDKIRASVSCPGYQTAFGGSCYEFVDLQHTFFSAQAWCEQ
RDGHLAFIPDKETQHFIQTLMDPKRDVWLGVAPSTSPNLQYSSTVEGALSWLDGSHLTYS
NWVSSPQPGEECGHILRDSGFQWEATRHCNKKLHFICQFDSGRSIVCAGRNTTLQCGSGQ
VLMIDRSFYGRKNLHYCRSMFSPPTTTTEHKCGWVDVVETLTAHCNGRQVCQIAPVVDSF
VELCPQLGSYLSVDYHCKDGLSLSVGTVAAVYDDVTINVEWLLHLQQGNLSCKLSTGDGH
VIYLLSPQGLENSMVHRYTYPSTFVVVVECITRDVHITAQKIITIQEPIIEFGVIRCYAG
KLSFHATDCKALWGEPFQIQIEVKAGTNVTYRVQSDDMLLSGLSVLRGNIPQNITVTPQM
MTQRGPGCHQLTLYASNMVTFPEVSAHLQMCELEKVARLEATVLTERDDCPDYPDITVSV
SLEQGAPVLLLFSLSGDNSSYTETREMNTSKEIFQIGHPIQADVVPLYHKYIIKTSSSTE
KEEDSKEEDSKEEDSPEETTTGPASTSPGTITDITATPTTTDTGKHLRCSNNNEVKAVFL
PLGDSSSNFKLNIKATANNGSFVASTTVTAEVLDYTAVSSSSVDDLKTSVENALVQLKEH
GVLSGETVGQIISSVANKLNAQSDESKQADRQKLREKMLDIMNNIVKAAPINTPDEVQAT
TRGLTAVVQKGTELSTSAQEEASLLFAALSSSLLHMNITNSEENINEIHTAASTIVEGIS
NILHYSSSVSLQRNVSDALLLALSNTQSALLAFKDVHQRPTIIQQAHIGVFVHRVTPGSL
HTESINIPNSSSPSFSLPKLPPDVLPSDEPVDIRMLSVDKNPFSWNERGNISGQIGALSL
TTTDGSDIPVENLSEDVEILLPRPVGEQVNTSVLDLGNYSTTTIDIPVADNTLVLKMVPS
NDPLPFKLLLGYMAYPTETNYVAMTEMPHQGATPEERYTWLLDPKDLKGNTGMHYLVVRP
IVGPGIKSINASLTITSITTACKFWNESKLDWSSYGCRVGVETTHLVTVCLCNHLTFFGS
SFFVTPNLVDPSRTAELFATFAENPVVVCFVGSLFVAYLLVVVWARRKDIQDTAKVKVTV
LEDNDPMDEYRYLLSVSTGHRGGASTSSQVTITLLGAEGNSEPHHLTDPKKRVFERGAVD
VFLLATPFSLGDLQGIRLWHNNSGSHPSWYVGNVVVQDLQTEQKWHFLCNSWLAIDLGDC
SLDKVFPVSTEVDLKRFSNLFFMKTSKDFSDGHLWYSVISRPPSSTFTCVQRVSCCFSLL
LCTMLTSIMFYGIPTDPSEQTMDLGHFEFSWQQFMIGVQSSLIMFPVNILIVSIFRNTCP
REKSCCKHKTEKPDTMEQTSCSQANTNDMNVSVTLDSVIKDITRIAHSLSKTVKSNVPCT
EFKFGPGQQVDINAVLSVVEDFIKQNNKTSDTTQTKTQSFCNPVQPQLPEASASMHPGST
VEGIQKKSNKTQYLYRQLCHIDKELSLLGPSGFPTQHSYSQALQQVQGMKGSLEDQLFTF
SCANPDELSPADSTDGDGSQKKRVCCHGGLPWWFIFVGWLLVIASSVVSGYFTMLYGLKF
GKERSVSWLVSMIISFFQSILVIQPLKVLLLAVFFALVIKKVDEEDFENMEFDRNLGERK
EQQMVRKNSNLYKPPPPADVEKMRRNKIMEQKAFALLKEILTYMGFMWMLLLMAYGQRDP
NAFFLNQHIRNSFSRGISDSMSLGEVFTWANTSLLSNLFGVYPGFITDGNSKLVGNARLR
QLRVQKDSCKTADSMLQFVPDCHAPYSWEAEDMGSYDPGWNHTVRDNISVSTSSPWTYQT
QAQLRAHPLWGKMVLYRGGGFVAELGPDSQNASSTLEYLFRNTWLDIYTRAIIVEFTVYN
ANVNLFCIVTFLLETTAVGAFQFHSELQSVRLYQSTGGLHIFVMAAEIIYLLFILYYMFL
QGKLMKQQRWAYFKSKWNLLELAIILLSWSTVAVFVQRTLLGNHDMTYYQNHKDQFASFY
ETATADSVLQYLIAFLVLLATFKLWHLLRLNPKMNMITAALRRAWSDISGFLVIIVIMLV
AYSVASNVIYGWRISTYRTFTDALLTIISLQVGIFNYDEVLDGTPVLGGLLFGSCVVFMT
FVVLNLLLSVILVAFNQEQIYHKPSDEEEIVDLMLKKICSLFGIRYKDTNDNRGPDVDP
NT seq
6660 nt
NT seq
+upstream
nt +downstream
nt
atgtgctggacctttgtgcacctgatgatcctgatgacactcacctgtctgtctaatgct
gaagataagataagggcttctgtttcctgtccaggctaccagacggcctttggaggctcc
tgctatgagtttgtggatctccagcatacttttttcagtgcgcaggcttggtgtgagcag
cgtgatggacaccttgcttttatcccagataaagaaactcaacatttcattcaaacactc
atggaccccaagagggatgtctggcttggagtagcgccctccacctctccaaacctgcaa
tattcttcaactgttgaaggtgctctctcttggctggatggttctcatctaacctattca
aactgggtgagcagcccacagccaggagaagagtgtggacacatactgagagactcaggc
ttccaatgggaagccacaagacactgcaacaaaaaactgcactttatctgccagtttgac
tctggcagatccattgtgtgtgcaggtcgtaacaccactctacagtgcggctctggtcaa
gtcctaatgatagatcgcagcttctatggtcgtaagaaccttcattactgtcgatccatg
ttctcccctccaacaacaaccacagagcacaagtgtggctgggtggatgttgttgaaaca
ttaacagctcactgcaatggtcgccaggtttgccagattgctccagttgtggactccttt
gttgaactctgtcctcagctggggagctacctgtctgtggactaccactgcaaagatggg
ctctcactgtcagtgggcactgtggctgctgtttatgatgacgtcaccatcaacgtggaa
tggcttttacatttacagcaaggtaacctcagctgcaagctgagtaccggagatggccat
gttatttatctgcttagtccacagggattggagaacagcatggtgcacagatatacttat
ccaagcacatttgttgtggttgtcgaatgcatcaccagggacgtgcacattacagctcag
aaaataataaccattcaagagcccattatagagtttggtgtaatcaggtgctatgctggg
aaactgtctttccatgcaactgactgcaaagccctttggggagagccattccaaattcaa
attgaagtaaaggcaggtacaaatgtgacctacagagtccagagtgatgacatgttgttg
tcaggtttatctgtgttgagaggaaatattccccagaacatcacagtgactccacaaatg
atgacgcagcgtgggcctggctgccaccagctgaccctttatgcatctaacatggtcaca
ttccctgaagtgtccgcacacctgcagatgtgtgagttggaaaaagtagccaggcttgag
gccactgtgttgacagagagggatgattgtccagactatccagatattacagttagtgtt
tcccttgaacaaggagcacctgtgctgctccttttctcactgtctggagacaacagctcg
tacaccgagaccagggaaatgaacacaagcaaggaaatctttcaaattggacaccctatt
caagcggatgttgtaccactttaccacaaatacatcataaagacttcatcatctaccgag
aaggaagaagacagtaaggaggaagacagtaaggaagaggacagtcccgaagaaaccacc
actggtcctgcctctacatcacctggcactattactgacatcactgccacacctaccacc
acagacactggtaagcatctgcgctgcagcaacaacaatgaagtgaaggctgtcttcctt
cctctcggagacagcagctccaacttcaagctgaatatcaaagcaactgcaaacaatggc
agctttgtagctagcaccactgtcactgcagaggtgctggattacacagcggtatctagc
tcctcagtagatgatcttaagacttcagtggagaatgctttggttcagctaaaggagcac
ggtgtactgtcaggagaaactgtgggacaaatcatcagttctgtggccaacaaactgaat
gcccaatctgatgaatcgaaacaagctgacaggcaaaagcttcgtgagaagatgctggac
ataatgaataacatagtaaaagcagctcccatcaacactccagatgaagttcaagcaacc
accagaggacttactgctgttgtccagaaaggcactgaactcagcacctctgctcaggaa
gaggcttcgttattgtttgcagccctcagctcatccctcctccacatgaacattaccaat
agcgaagaaaatatcaatgaaatacacactgcagccagcaccattgtggaaggaataagc
aatatcctgcactattcttcgagtgtaagtttgcagaggaatgtctctgatgcccttctc
cttgccctgagcaatacacagagtgcactgttagcatttaaagatgtgcaccagaggcca
actatcatccaacaagctcatattggtgtgtttgttcatagagtgacacctggaagtttg
cacacagagtctataaatattcccaacagttccagcccatcattttctctcccaaaacta
ccccctgatgtgttaccttcagatgaaccagtggatataaggatgctgagcgtagacaaa
aacccattttcctggaatgaaagaggaaacatcagtggccaaataggtgctctatccctc
acaacaactgatggctccgatatccctgtggagaacttgagtgaggatgtcgagattctg
ttgccaagacctgttggagagcaggtgaacacctcggttttggacctgggaaactacagc
acaaccaccatagacattcctgtagctgacaatacattggtgttaaagatggtgccttca
aatgatcctttacccttcaaactgctcctgggttatatggcctaccctactgaaaccaat
tatgttgcaatgacagagatgcctcatcagggagcaacaccagaggagagatacacttgg
ctgctagaccctaaagatttaaagggaaacactggaatgcactatcttgtagtgaggccc
attgtaggcccaggtataaaatccatcaatgccagtttaacaattacctcgatcactaca
gcatgcaaattttggaatgagtcaaaattggattggagcagttatggatgcagggtcggt
gtagaaaccacacatttagtcacagtgtgcctctgcaaccacctcaccttcttcggaagc
tctttcttcgtcactcccaaccttgtggatccatcacgcactgctgagctgtttgcgact
tttgctgagaatcctgtggttgtctgctttgtggggtctctctttgtggcctatctcttg
gtggttgtgtgggcacgaagaaaagacattcaagacacggccaaggtcaaggtgactgtg
ctggaggacaatgatcccatggacgagtatcgctacctgttgagtgtcagcactgggcac
cggggaggagcctccacttcctctcaggtgacaatcactctgctgggtgcagagggaaac
agtgaaccacatcatctgacagatccaaagaaacgtgtgtttgagagaggagcagtggat
gtgttcctgctagctacacccttctccctgggagatctgcagggcattagactgtggcac
aacaactcagggagccatccttcctggtatgtaggcaatgtcgtggtacaggacctacag
acggaacagaaatggcattttctatgcaactcctggctggcgatagacttgggcgattgt
tccctcgataaagtttttcctgtttcgacagaggtggatttgaagaggttcagtaacttg
ttcttcatgaagacttcaaaggatttcagtgacggacacctctggtactctgtgatcagt
cgaccaccgagtagcaccttcacttgtgttcagagagtttcctgttgcttcagcctgctg
ctctgtaccatgctgaccagcatcatgttttatggcatcccaacagatccctctgagcag
accatggatctgggtcactttgagtttagctggcaacagttcatgattggagttcagagt
tctctcatcatgtttcctgtgaatatccttattgtcagcatcttcagaaacacttgtcct
cgggagaagtcttgttgcaagcacaaaacagaaaaaccagatactatggagcagacttcc
tgctcacaggctaacaccaacgacatgaatgtcagtgtcactttagactctgtcattaag
gatatcacaagaatcgctcattcactgtctaagaccgtaaaaagcaatgtaccatgcaca
gagttcaagtttgggcctggacaacaagtggatatcaatgctgtcctttctgtggtggag
gatttcatcaaacagaataacaaaaccagcgacaccacccagaccaaaactcagagcttc
tgcaaccccgttcagcctcagctgccagaggccagtgcaagtatgcatcctgggtcaaca
gtagaggggattcaaaagaagagcaacaaaacccagtatctttaccggcagctgtgtcac
attgacaaagagctgagcctgctgggaccctccggcttccccacccaacacagctacagc
caggctctgcagcaggtccagggcatgaagggctctcttgaagatcaactcttcacattt
agctgtgccaacccagatgagttgagtcctgcagatagcacggatggtgacggcagtcag
aagaaaagggtgtgctgtcatggagggctaccctggtggtttatttttgtcggctggctg
ctagtgatcgcaagcagtgttgtatcaggatatttcacaatgctttatgggttgaaattt
gggaaggaacgctctgtgagctggttggtgtccatgatcatctccttttttcagagtatc
ctcgtcattcagccattgaaggtgcttttacttgcagtcttctttgctcttgtaataaag
aaagttgatgaagaagattttgaaaatatggagtttgacagaaatctaggtgaacgtaag
gaacaacaaatggtcagaaagaacagtaatctctataagcctccgcctcctgcagacgtt
gagaaaatgagaagaaacaagataatggaacagaaagcctttgccctccttaaggagatt
ttgacctacatggggtttatgtggatgttgctgctgatggcgtatggccagagagatccc
aatgcttttttcctgaaccagcacatccggaacagcttcagtagagggatctcagacagc
atgagtcttggagaagtgttcacttgggctaatacatcactactgagcaacctttttgga
gtttatccaggatttatcacagatggaaactccaagctagtgggtaatgcccgtcttcgt
cagttgagagtgcagaaggactcctgtaagactgcagactccatgctccagtttgtgcca
gactgtcacgctccatattcatgggaggcagaagacatgggctcctatgaccctggctgg
aaccatactgtaagggataatatctctgtgagcacttccagcccttggacgtaccagacg
caggctcagctcagggctcatcctctctggggtaaaatggtgctctacaggggaggtggc
tttgtagcagagcttggtccagattcacaaaatgcaagcagcacccttgagtatctattc
agaaacacgtggctggatatatacacaagagccatcattgtcgagttcactgtttataat
gctaatgtgaacctcttctgcatcgtcacattcttgctggagaccacagctgtaggggca
tttcagttccacagtgagctacagagtgttcgcctctaccaatcaaccggtggccttcac
atctttgttatggctgctgagatcatatacctgcttttcatcctttattacatgttcctg
cagggcaaattaatgaagcagcagcgatgggcttacttcaagagcaagtggaacctcctt
gagctggctatcatcttactgagctggagcaccgtggctgtcttcgtacaaaggaccctg
cttgggaaccatgatatgacctactaccaaaatcacaaagaccaatttgccagtttttac
gagacagccacagcagactcagtgctccagtatctgatcgccttcctcgtcctgctcgcc
accttcaaactgtggcacttgctcagactgaaccctaagatgaacatgatcactgctgcg
ctgcggcgggcctggagtgatatatctggtttccttgtaatcattgtgatcatgctcgtg
gcatattcagttgcatccaatgtgatttatggctggaggatttccacatatagaacgttt
acagatgctctcctgacaatcatcagtttgcaagtaggcatctttaattatgacgaggtc
ctggacggtacccctgtgcttggtggattactctttggttcctgtgttgtgttcatgaca
tttgtggtgcttaatctcctcctctcagtgatcctcgtggcattcaaccaggagcaaata
tatcacaagccctcagacgaggaggagattgttgacctgatgctgaagaaaatctgcagt
ctttttgggatcagatataaagacacaaatgacaacagggggccagatgttgacccttaa
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integrated database retrieval system
