Epinephelus lanceolatus (giant grouper): 117251063
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Entry
117251063 CDS
T07331
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117251063 (ddx18)
03009 Ribosome biogenesis [BR:
ely03009
]
117251063 (ddx18)
Enzymes [BR:
ely01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117251063 (ddx18)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117251063 (ddx18)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
90S particles
Helicases
117251063 (ddx18)
Pre-60S particles
117251063 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
117251063
NCBI-ProteinID:
XP_033472922
LinkDB
All DBs
Position
3:39323509..39334014
Genome browser
AA seq
669 aa
AA seq
DB search
MADLQMKLLRKKIQKRSEKNKERKLLQTQTEGTEAVNSNGLAEECCEEPAAVCKADNKPK
KKQKKQLGVPLEGITSEQTSLKKKKTKKKRKLADTAESPAEKKTKTVKGAEEEEEEEEEE
EAEEVAATLADGEQATENPEEASDEEEEDKTGEGDDEEDDQPELPSGLTGAFEDTSFASL
AELVSESTLKGVKEMGFEYMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIY
KLKFMPRNGTGVVILSPTRELAMQTYGVLKELMTHHVHTFGLIMGGSNRSAEAQRLANGV
NILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTML
FSATQTRKVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLLLFTFLKK
NRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCT
DVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRFLK
QAKVPLSEFDFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVN
TLNLPMVALSFGFKVPPYVDLNVHSSKGAKLQKRGGGGGFGYQKSKNAQKARIFKHVNKG
KGDRRQFSR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctacagatgaagcttctccgcaagaaaattcagaaaagaagtgaaaagaac
aaagagcgcaaactactccagacacagacagagggcacagaggccgtgaactcaaacggg
ttggcagaggagtgttgtgaggaaccagcagctgtttgtaaagctgacaacaagcccaag
aaaaaacagaagaagcagcttggggtaccattggaagggatcacatcagagcaaacttct
ttgaagaagaagaagacaaagaagaaaagaaagcttgctgacactgcggaatcaccagct
gagaagaagaccaaaacagtgaaaggagcagaggaagaggaggaggaggaggaggaggag
gaggcggaggaggtagcagcaacattagcagatggagagcaggctactgaaaatccagag
gaagcttcagatgaagaagaagaggacaaaactggagagggggatgatgaagaggatgat
caacctgaattaccatctggcttgacaggagcatttgaggacacatcctttgcctccctt
gctgagctggtaagtgagagcacgctgaaaggagtaaaggagatgggcttcgaatacatg
actgagatccagcacaaaagtattcgtcccctgctggaaggaagggacgttctggctgct
gccaagacaggtagtggtaaaaccttggccttcctcatcccatctatagagctcatctac
aaactcaagttcatgcccaggaatggcactggtgtagtgatcctttcacccacacgtgag
ttggcaatgcagacttatggtgtgctgaaggagctgatgacgcaccatgtgcacaccttt
ggtctgatcatggggggcagcaaccgctcagctgaggcccaaagactggccaacggtgtc
aacatcctggtggctacacctggccgtctactggaccatctgcagaataccccaggcttc
atgttcaagaacctccagtgtctgatcattgatgaggctgaccgtatcttagaggtgggc
tttgaagaggaactgaagcagatcatcaaactgctgccaaagaagagacagacgatgctg
ttttcagccactcagacccgtaaagtggaggatttggctcgcatctccctgaagaaagag
cccctttatgtcggtgtagatgacaacaaagacaatgccactgttgatggcctggagcag
ggttatgtggtgtgtccatcagagaagcgcttcctgctactcttcaccttcctgaagaag
aaccgcaagaagaagctcatggtctttttctcctcctgtatgtctgtgaaattccactat
gaactactcaactatattgacctgcctgtcatggccatccatggcaagcagaagcagacc
aaacgtaccaccaccttcttccagttctgcaacgctgactcaggcatcctgctgtgtact
gacgtggcagctcgaggcctggacatccctgaggtggactggatcgtccagtacgacccc
ccagatgaccccaaggagtacatccacagggtgggcagaacagccagaggcatcaatggc
agaggccacgcgctcctcatcctccgaccagaggagctgggattcctccgcttcctgaaa
caggccaaggtcccattgagcgagtttgacttttcttggagtaaaatctctgatatccag
tcccagctggagaagctgattgagaagaactattacctccacaagtcagcccaagaggcc
tacaagtcctacgtgagggcttatgactctcattcgctcaaacagatctacagcgtcaac
accctcaacctccccatggtggcgctgtcctttggctttaaagttcctccatatgttgat
ctgaacgtccacagcagtaaaggtgcaaagttgcagaagcgcggcggtggaggcggtttt
ggataccagaagtccaagaatgcacaaaaagccagaatctttaagcatgtcaacaaagga
aagggtgacaggaggcaattctcccgctga
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