Epinephelus lanceolatus (giant grouper): 117251198 Help Entry 117251198         CDS       T07331                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism ely  Epinephelus lanceolatus (giant grouper) Pathway ely04382   Cornified envelope formation ely04510   Focal adhesion ely04512   ECM-receptor interaction ely04518   Integrin signaling ely04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ely00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     117251198 (col4a1)    04518 Integrin signaling     117251198 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     117251198 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     117251198 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     117251198 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ely04147]     117251198 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:ely00536]     117251198 (col4a1) Exosome [BR:ely04147]  Exosomal proteins   Exosomal proteins of other cancer cells    117251198 (col4a1) Glycosaminoglycan binding proteins [BR:ely00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    117251198 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  117251198 NCBI-ProteinID:  XP_033473144 LinkDB All DBs Position 3:17530427..17585880 Genome browser AA seq 1641 aa AA seqDB search MLLPSGALLLLAALYSSVDLTGAEGCGTSCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ GPEGPPGPIGPTGAVGEPGAPGIKGVRGPPGLPGFPGNPGLPGINGNDGPQGLPGIPGCN GTKGDRGRDGTPGFPGLQGPPGIPGIPGMKGDPGGVIGIVPLKGDRGFPGTPGLPGPVGS PGPTGPPGPRGYAGLKGEPGPPGPPGEKGDKLAFVSEKGDKGDRGFRGPPGPPGPPYQGV GGGHTTVHVPGPQGERGLPGDKGDQGVCAPYQNGIKGDPGPPGPRGKPGKDGEHGLKGEK GFPGGSGYPGSQGEKGERGPPGYGSGAPGPPGPRGFPGLQGDKGFPGPQGEAGPPGRHTE GPRGEKGEKGDIGERGERGIEGESLVGPPGQPGDPGPPGPPGQPIDPNECNIQKGAPGPP GPPGLQGELGQKGDRGDTCVQCEGSGPPGLPGPEGPKGERGPPGLVGAKGEKGGTGLPGQ PGRPGSQGVPGLIGAPGAIGEPGDIFAVPGLKGEKGLPGLSGSPGQPGQDGLPGRDGIPG VPGLKGEPAKEGIKGERGPSGDPGPLGPPGERGPPGLPGFGRPGESGEKGSQGRPGIPGA PGPPGTKGEPGKGVMTPGPQGIPGPRGENGLPGIQGDRGPQGDPGLPGFPGQKGEHGLPG IGLPGPTGPKGLSGIPGAPGLPGEPGRPGQDGFTGQPGVPGQKGEPGRGLPGPKGSQGLP GITGFQGEKGTVGLPGVPGREGSTGPPGPQGIKGEVGPPGPPGLSGSPGPPGKGSPGAPG PQGPAGEPGPYGREGAKGEKGYPGAPGLDMPGPKGEKGTPGFPGTPGPKGLPGPAGLPGR DGLIGNQGPKGEMGVIGTPGVPGFPGPPGTPGSPGLRGDPGITGPRGENGEPGRKGERGD QGLQGPPGNMSIVDMEHMKGEKGDTGDRGMPGVTGEKGHRGLPGNPGMPGKDGEPGLPGQ PGEKGDPGLPGDPGHMGPPGQKGNVGEMGIPGPVGPKGTKGDIGTPGHPGFRGTDGQKGD KGVAGDPGIGLPGPPGEKGQQGQPGFPGVPGEKGFRGHEGMPGKPGLQGVKGDKGSIGYS GQPGRPGEKGIPGLPGSTGESGHDGRPGEPGLQGPPGVPGEKGDPGLDGIPGSSGERGDP GIPGRGFPGHPGVLGDKGDKGSPGFPGTPGHPGVPGIKGDKGLPGAQGVQGEPGERGLPG LSLEGPKGERGETGQPGEGGSPGGPGPSGVPGRDGQKGEKGDQGLPGFQGESGQKGDPGV PGLPGQSGLPGIDGQKGERGLQGVPGFPGTRGNVGDIGFKGDVGDRGFPGEKGNEGPPGP PGPSIVIKGDIGFPGIQGLQGPQGPSGFPGQKGQQGMTGLQGPKGEDGVPGYHGQPGAKG DPGLPGPVGPRGHPGPPGPDGVPGQVGPPGPSSMDHGFLVTRHSQNVEVPQCPEGTSLIY DGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEP MPMSMAPITGESIKPFISRCAVCEAPAMVIAIHSQTIMIPPCPHGWDSLWIGYSFVMHTS AGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDNEMFTKPVPT TLKAGSLRTHISRCQVCMKRT NT seq 4926 nt NT seq  +upstreamnt  +downstreamnt atgctgttaccgtccggcgccttgttactgctggcggctctctactcaagtgtagacctg acgggggctgagggctgcgggacatcgtgtggaaaatgtgactgcagcggtgtgaaagga gcaaagggtgagcgtggatttcctggtctacaaggtaatatgggatttccagggatgcag ggacctgaagggcctccaggacctatcggccccacgggagcagtcggtgaacctggggct cctggaataaaaggagtgcggggtcctcctggtctgccaggtttcccaggaaacccaggc ctaccaggcatcaatggaaacgatggcccacaaggtttgccaggcatcccaggatgcaac gggactaaaggagacagaggaagggatggcactcctggttttcctggtcttcaaggacct cctggcatcccaggaattcccggaatgaagggtgaccctggtggtgtgatcgggattgtt cccctgaaaggagacagaggattccctggcacacctggattacctggaccagttggatct cctggacctactggacctccaggacctcgaggctacgcaggactcaaaggtgaacctggc ccacctggccctcctggagagaagggtgacaagctggcctttgtgagtgagaagggagat aagggtgaccgaggatttcgtggcccacccggccctcctggacctccctaccagggagtg ggaggaggtcataccacagtgcacgtacctggacctcagggtgaaagaggacttccagga gacaaaggagaccagggtgtttgcgccccatatcaaaatggtatcaaaggtgatcccggc ccacccggaccaagaggtaaacctggcaaggatggagagcatggattgaagggagaaaaa ggcttccccggaggctctggatatcctggttcgcagggtgaaaagggagaaagaggacca ccaggttatggtagtggcgctcctggtcctcctggtcctcgtggtttccctggattacaa ggagacaaaggtttccctggtccccaaggagaggcaggtccaccaggccggcacactgaa gggcctcgtggagagaagggtgagaagggagacataggtgagagaggagagaggggaata gaaggagagtctctcgttggacctccaggacaacctggagaccctggaccacctggacca cctggacaaccgattgatcctaatgaatgtaacatccagaaaggagctcctggcccacct ggacctccagggttacaaggggaattgggacagaaaggtgacagaggtgatacctgtgtt cagtgtgaaggtagcggcccacctggattacctggccccgagggtcctaaaggagaacga ggacctcctgggcttgtaggagctaagggagaaaagggtggaactggccttcctggacaa cctggaagacctggttctcaaggtgttcctgggttgattggagcacctggtgctattggt gaaccaggggacatttttgcagttcctggtctgaagggggaaaaaggtctgcctggtctc tctggttcaccagggcagccagggcaggatggattgccagggagagatggcatccctgga gtacctggccttaaaggagaaccagccaaagagggcatcaagggtgagcgtgggccatct ggagaccctggtcctcttgggccaccaggagagaggggtccacctggcctaccaggcttc ggtcgaccaggagaaagtggagaaaagggcagccaggggagaccaggcatccctggagct cctggaccacctggtacaaaaggtgagccaggtaaaggtgtgatgactcctggacctcag ggaatacctgggccacgtggagaaaatggcttgcctggaattcaaggtgacagaggccca caaggagatccagggttgccaggtttccctggacaaaagggtgaacacggacttcctgga attggactcccaggtccaactggtcctaaaggactcagtggaattccaggagctcctgga ttaccaggagagccaggaagacctggacaggatggcttcactggacaacctggtgtacct ggacaaaaaggtgaaccaggacggggtcttccaggcccaaaaggttcgcagggcctccca ggaattactggcttccaaggagaaaagggtacagttggactacctggtgttcctggacga gaaggctcaacaggacctccaggacctcagggaatcaaaggtgaagtgggacccccagga cctcctggattgagtggctcaccaggtcctccaggaaaaggttcacctggagctcccgga ccacaaggaccagctggagagcctggaccatacggtagggaaggagcaaagggagaaaag ggctacccaggtgctcctggtctggacatgccagggcctaagggagagaagggaaccccc gggttcccgggaacgccaggtcctaaaggactgccagggccggcaggcctaccaggcagg gatggactgattggaaaccaaggtcctaaaggtgaaatgggggtcatagggacaccagga gtaccaggatttcctggaccacctggtacacctggatctcctggactgagaggtgatcct ggtattactggaccaagaggtgaaaatggagagcctggacgtaaaggagaaaggggagac caaggtctccagggacctcctgggaacatgagtatagttgacatggagcacatgaagggg gagaagggagacacaggagacaggggtatgcctggggtcactggagagaagggccaccgt ggacttcctggtaaccctggaatgccaggcaaagatggagagcctggattacctggacag ccaggtgagaaaggagaccctggtttacctggagaccctggtcatatgggaccacctgga cagaaaggcaatgtaggagagatgggaataccaggtccggttggtccaaagggtactaaa ggagatatcggtacacctgggcatcctggattcagaggcacagatggacagaaaggagac aagggagtagctggtgatccaggtattgggctcccaggacctccaggagaaaagggtcag caaggccagccaggattcccaggagtaccaggagagaagggttttaggggtcatgagggt atgccaggcaagccaggactgcaaggagtcaagggagacaaaggatctattggctactca ggtcagccaggtagaccaggcgagaagggtatccctgggctaccgggatctacaggagaa tctggccatgacggtcggcctggtgaacctggcttgcaaggacctcctggtgttccagga gaaaagggagatcctggattggatggcatccctggatcctcaggggagagaggagaccca ggtatacctggccgtggtttccctggacatcctggagtgcttggtgacaaaggtgacaaa ggtagtcctggcttccctggcactccaggtcatccaggtgtccctggtatcaaaggtgac aagggacttccaggtgcacagggagtccagggtgagccaggagagagggggctcccaggt ctctctcttgagggccctaaaggagagcgaggagaaacaggacaacccggagaaggagga tccccaggaggaccaggaccctctggtgtgccaggcagagacggccaaaagggagaaaaa ggagaccagggtcttcctggtttccagggagagtcgggacaaaagggcgatcctggagtt cctggacttcctgggcaatctggccttccaggtattgatggacagaagggagagagggga ttgcagggtgtccctggcttcccaggtactaggggtaatgttggggacattggattcaaa ggagacgttggagacagaggattccctggagaaaagggcaatgaaggcccccctggtcct cccggccccagcattgtcatcaaaggagacattggcttcccagggattcaaggcttacag ggacctcagggaccatctgggttccccgggcagaaaggacagcagggcatgacaggtctt caagggccaaaaggtgaagatggcgttcctggatatcatggtcagcctggagccaaaggg gatcctggcctgccagggccagtgggacccaggggacaccctggccccccaggacctgac ggtgttccaggtcaagttggtccaccgggtccctcctccatggatcacgggttcctggta acccgtcacagtcaaaatgtagaggttccacagtgtcccgagggaacctcactcatatat gatggctactccttgctctatgtacaaggcaacgaacgctctcatggacaggacttaggt acggcaggcagctgtctaaggaagttcagccccatgcccttcctgttctgtaacatcaac aatgtgtgcaactttgcctcccgcaatgactactcctactggctcacctcccctgagccc atgcccatgagcatggcacccatcactggtgaaagcatcaaacccttcatcagcaggtgt gctgtgtgtgaagccccagccatggtgatagcaattcacagtcagaccatcatgatcccg ccatgccctcatggctgggactctctgtggattggctactcctttgtcatgcacaccagt gctggtgctgagggttcgggccaggctctggcctctcctggttcctgcctggaggaattc cgtagtgctccattcattgagtgtcacggtcggggaacctgcaactactacgccaactcc tacagcttctggctcgccaccattgaggacaacgagatgtttacgaaacctgtccccaca acgctaaaagcaggcagtctccgaacacacataagccgctgtcaggtgtgcatgaagagg acataa

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