Epinephelus lanceolatus (giant grouper): 117251342
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Entry
117251342 CDS
T07331
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ely03009
]
117251342 (spata5l1)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
117251342 (spata5l1)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
117251342 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_22
AAA_33
AAA_14
AAA_7
bpMoxR
TIP49
NTPase_1
Mg_chelatase
Rad17
NACHT
Motif
Other DBs
NCBI-GeneID:
117251342
NCBI-ProteinID:
XP_033473439
LinkDB
All DBs
Position
1:43197837..43205175
Genome browser
AA seq
747 aa
AA seq
DB search
MSLRLLSVDPSDRGSQRCRLGPGLMSALGLSLGSPLLVSVPGGSCLCTAWPRPDLAEGFL
QMDLKCSSPSLISHPPAHLHLDPEQLTPVPCPKLKGVKITVVVQSADFKRHTSPRLVHEL
VKDMLKGVYVHKGHVINLEDFDTEIRYVVIESINLDSASAGLITSKTGVEITGIQTVRHY
RSHLQGQQVPPLGGLEEVSVSLREMLQLPLFYPDTLTSLGVSCPRGVLLVGPPGVGKTLL
VRRVVGEVGASLVVVRGPEVVGSRPGESEEKLRAVFEQAQSAAEEGPCVLFLDELDSLCP
RRTGSSAPENRLVAQLLTLMDGMNQSDRFLIVGATNQPDSLDPALRRPGRFDREVIIGAP
TLQQRKAILCVLCERMQVCPSVDLAELAQRTTGYVGADLSALCREAAMLAIRENSKGSGE
QAVGMKHFQEALKVVRPSCLRSSLGRTELSPVSWEQIGGLDEVKLKLRQSIEWPMLYPEA
FVRLGLCRPRGVLLYGPPGCAKTTLVKAAASSSHCAFLSVSGADLYSPYVGDSEKALALL
FRQARACAPCILFLDEIDSLIGSRSNSQMPNSVQTRLLSVLLNEMDGVGLKTLERRGTEK
IPQAEGMEEKHTQEKLDCQEVCNKEVMVVAATNRPDCLDSALLRPGRLDHIIYVPPPDEQ
ARLCILKVSTQSMPVGADVCLEDLAAKTELYSGADLENLCKEAALLALQDENMEASVIEH
THFLRSLSKMSPSLTAQQIHAYQTPPR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcggctgctgtcagtggatccatcagaccggggctctcagagatgcaggctg
ggtccaggcttgatgtcagcgctgggtctgagtctgggctcccctctgctggtgtcagtc
cccggggggagctgcctctgcaccgcctggccccggcctgacctggcagagggcttcctg
cagatggacctgaagtgttcctctcccagtctcatctctcacccacctgctcatctccac
ctggaccccgaacagctcacacctgtgccctgccccaaactgaaaggtgtcaaaataact
gtggtggtccagagtgctgattttaagagacacacatctcctcgccttgttcatgagctt
gtgaaagacatgctgaaaggtgtatatgtccacaaggggcatgtgataaacctggaggat
tttgatacagagattagatatgttgttattgaaagcatcaatctggactctgccagtgct
ggattaatcacttcaaaaactggtgtggagataactggcatccagactgtccgacattac
aggagtcatctacagggccagcaggtgccaccactggggggtctggaggaggttagtgtc
tccttgagagagatgctgcagctgcctctgttctatccagacaccctgacctctcttggt
gtgtcatgtcccagaggtgtgctcctggtggggcctccaggtgtgggcaagaccctgctg
gtccgcagagtggtgggggaggtgggagccagcctggtggtggttagagggccagaggtg
gtgggatcacggccgggtgagagtgaggagaagttgcgtgctgtgtttgagcaggctcaa
tctgcagctgaagagggtccgtgtgtgctgttcttagatgagttagactctctgtgtcca
aggaggaccggctcgtcggcaccagagaaccgcctggttgctcagctcctcacactgatg
gacggaatgaatcagtccgatcgcttcctcatcgtcggagccaccaaccagccggacagc
ttagacccggcactgcgcaggcctggaagatttgacagagaggttattatcggagctccc
accttgcagcaaagaaaagccatcttgtgtgttctgtgtgagaggatgcaggtgtgtccc
agtgtggacttagctgagctggcacagagaaccacaggatatgtaggagcggacctcagc
gccctgtgcagagaggctgccatgctcgctatacgggaaaactcaaagggttcaggagag
caggcggtgggtatgaaacacttccaggaggccctgaaggtggtgcgtccctcctgcctg
cggagcagcctgggcaggacggagctctctccggtgtcatgggagcagataggaggcctg
gatgaggtcaaactcaagctaagacagagtatcgagtggccgatgttataccccgaggcg
tttgttcgtctgggtctgtgtcgaccccgtggcgtgctgctctacggacctccaggatgt
gcaaagactacactcgtcaaggccgcagccagctcgtctcactgtgccttcctgtctgtc
agtggtgctgacctctactctccctatgtgggagactcagagaaggctttagcgctgctg
tttcgccaggcccgcgcctgtgctccctgcatcctgttccttgatgagattgactctctg
attggctcgcggtcaaacagtcagatgccgaacagcgttcagacccgcctcctgtctgtg
ctcctaaatgagatggatggggtcggcctgaagacgctggagaggagagggacagagaag
atcccccaggcggagggaatggaggagaagcacacgcaggaaaagttggactgccaggaa
gtatgcaacaaagaggtgatggttgtagctgctacaaaccgacctgactgcttagacagt
gccctcctcagacctggcaggctggaccacatcatctatgtcccaccacctgacgagcag
gctcgtctctgcatcctgaaggtgtccacacagtcgatgcctgtgggtgctgatgtgtgt
ctggaggacctggcagcaaagaccgagctttactctggagctgacctggaaaacctgtgt
aaagaggcggctctgttggcgctacaagatgaaaacatggaggcgtctgtcatcgaacac
acacacttcctccggtccctcagcaaaatgagcccctctctcactgcccagcagatccat
gcatatcaaacacctcccagatga
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