Epinephelus lanceolatus (giant grouper): 117251506
Help
Entry
117251506 CDS
T07331
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117251506 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117251506 (clasp1a)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
117251506 (clasp1a)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
117251506 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Adaptin_N
Cnd1
Sec7-like_HUS
ParcG
HEAT_DAAF5
Paxt-1_C
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
117251506
NCBI-ProteinID:
XP_033473731
LinkDB
All DBs
Position
3:39391510..39516641
Genome browser
AA seq
1646 aa
AA seq
DB search
MMEPSMENCLALVLQKDMGRRLQVGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWV
NSSNFKVALLGLDLLSALVTRLQERFRAHVGTVLPSLIDRLGDAKDQVRDQDQTVLLKIM
EQAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLSTYGAQGLTLSKIVPHICNLLGDP
TSQVRDGAMSCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSD
KNFEDEDSVDGGRSSSSSSSKAPPSGRRTVVSSVRRPSSATTAKATGKEAGAGAVDEEDF
IKAFEDVPTVQIYSNRELEDQLTKIREVLSDDKHDWEHRVVALKKVRSLMLAGATEYEGF
PQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESVMPTLLNLVPNSA
KVMATSGVATIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLER
HVAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLKS
SDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRVSTTPGSLQRSRSDID
VNAASSAKSRLSTVPASSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAST
SVVDSRGRSRAKVVSQSQRSRSANPINAGSRSSSPGKLLGHSSYGRIPRATMSATTTPAD
KRSRIPRSQGCSRETSPSRLGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSR
ESSRDTSPARGFTPLASRRHSRSTSALSTADPHSQSDRYGLIHQARISASVNAMRVLNTG
TEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYGSRNGGIPH
YLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPH
SKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDITRES
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKTLQNWVSEELAGRSSTAALLSAEGNQEERCKQAAQVVLIALFELNTPE
FTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPTRHTPSRTSPLTSPT
NCSHGGLSPSRLWGWGVDGLSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTEN
MNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPIRQEGKRDDAAGREGVASSPGSDARLGLD
VVEGGRTALDNKTSLLNTPSPRSFSGPRSREFAPYGYGETICTYDKSALKEAVFDDDVEQ
FRDCRRQESGENKMTLPKVFAPAVGQDHSDMVADLLKELSNHNERSEERKGALVDLLKIT
REDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKT
LEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIER
IAKDSLLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMK
LLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcccagcatggagaactgcctggccctggtcctgcagaaggacatgggccgt
cggctgcaggtggggcaggagatcattgattacattttggacaaggagaagtcccacgac
ctggagcaggatcagacagcactggacaaaatggttgatggcatcgccagctcctgggtc
aactccagcaacttcaaggtggctctgcttggcttggacctcttatctgccttagtgacg
aggttacaggagcgatttagggcccatgtgggaacagtcctgcccagccttattgatcga
ctgggagatgctaaagaccaagtgcgagaccaagaccaaacagtgctgctaaagatcatg
gaacaagctgccagcccacagtatgtgtgggacagaatgttgggaggtttcaaacataag
aacaacaggaccagagaaggagtgtgcctttgcctcattgccacactgagcacatacgga
gctcaaggcctgaccctcagtaaaattgttccccacatatgtaacctcttgggggacccc
acaagtcaggtacgtgacggagctatgagctgcttggtggagatctacagacatgtgggt
gagagggtgaggatggatctcagcaaaaagggcttgccacagtcacggttgaatgtaatc
tttagcaaatttgatgaagtccaaagatccgggaacatgatctcatcgtctggctcagat
aagaactttgaggatgaagattcagtggacggaggccggtcctcttcctcttcatcatcc
aaagcaccccccagtggcaggaggactgtagtgagctctgttagaagaccaagctcagcc
accacagctaaggcgacaggtaaagaagcaggtgctggtgctgttgatgaagaggatttt
atcaaagcctttgaagatgtgcccacagtgcagatctactctaacagagagctagaagac
cagctgactaagatcagagaagtgctgtctgatgacaaacatgactgggagcaccgagtg
gtcgcgctgaagaaggtccgttctctcatgctggccggggcaacagagtacgagggtttc
cctcaacagctgcgtctcctggaggctcccctcaaactgtcagctaaagacctgcgctca
caggtggtccgtgaggcctgcatcacactgggacatttgtcatcaatactgggtaacaag
tttgaccatggagcggagagcgtcatgcccacactgctgaacctcgtgcccaacagtgcc
aaagtcatggccacctctggggtggccaccatccgcctcatcctcaggcacacacactac
ccgcgcctcatccccatcatcaccagtaactgcacctccaaatcagtagcagtcagacga
cgctgttatgagttcctagacctcatgttacaagagtggcacactaatacactggaaaga
catgtggctgttctgactgagaccatcaagaaaggcatacacgatgctgactctgaggcc
agatccattgcaagaaaatgctattggggtttccatggtcactacagccgggaggcagag
catctgttccaggcgctggagtccacctatcagaaggccctccagtctcacctgaagagc
tctgacagcatcgtgtctctaccccagtctgaccgctcctcatcgtcttcccaggagagt
cttaaccggccattgtctgtgaagagtgtcattggagggagcataacaaggagtaagctg
gtgagcaccagggtgtctactacaccgggttctctccagcgttcccgtagtgacatcgat
gtgaacgccgcctccagtgccaagtcacgtctgtccaccgtccctgcctcctcgccgttc
agctctgcagctgcccttcctccaggatcctatgcctcattagatggcactcccggtaaa
agtgatggtcgtgttcgtaccaggaggcaaagctcaggcagcgtgggtggagccagtacc
tcagtggtggacagtagggggcgcagccgagccaaagttgtctcccagtctcagcgatcc
agatcagccaatcccatcaatgccggcagtcgctccagctccccgggtaagcttcttggc
cacagcagctacggccggatccctcgagccacgatgtcagccaccaccacgccagcagac
aagcgcagcaggatccctcgcagccagggctgcagccgggagacgagccccagccgacta
ggccttgccagcctgtgtggtaaagctcttcttcctgctgctcttccctaccgcacgcta
gcccggagccgcattccccgtcccagcatgagtcagggttgcagtcgcgacaccagtcgc
gagagcagccgcgacaccagccctgctcggggcttcactcctctggcctcccgacgtcac
tcccgttcaaccagcgctctctccacagccgacccccacagccagtcagaccgatatggt
ttaattcaccaagcaagaatctctgcatcagtcaatgccatgagggtccttaacactggc
actgaggtggaggcagcagttgccgatgctctgctattaggagactccaggaataagagg
aagccattgaggcggaggtacgaatcaccagggatgtactctgatgatgacgccaacagc
gatgcctccagtgcctgctctgagcgctcatatggctcaaggaacggaggcatccctcat
tacctgcgccagacggaggacgtggcggaggtcctgaaccactgcgccagctccaattgg
tcagagaggaaggagggcttgctgggcctgcagaatctcctcaagagccaaagaatactg
agccgtgtggagctgaagagactctgtgagatcttcacaaggatgtttgcagatccacat
agcaagagagtgttcagcatgttcctggaaactctggtggacttcatcacagtacacagg
gaggacttgcaggactggctgtttgtcctgctcactcagctgctgaagaagatgggcgca
gacctgctgggctccgtccaggccaaagtccagaaggccctggatattacaagggagtcc
ttcccatttgaccaacagttcaacattctgatgaggttcatcgtcgatcagactcagaca
cctaatctgaaggttaaggtggccattttgaagtacatcgagtccctggctcggcagatg
gacccgactgactttgtcaactccagcgagacgcgtctggccgtatctcgcatcatcacc
tggaccactgaacccaaaagttctgatgtcaggaagacccttcaaaactgggtgagcgag
gagctagctggcaggtccagtactgcagccttactgtctgctgagggcaaccaggaagaa
aggtgtaagcaggcggcccaggtggtgctgatcgctttgtttgagctcaacaccccagag
ttcaccatgctgctgggagctctccccaaaaccttccaagatggagccaccaaactgctg
cacaaccacctgaagaactccagcaataccagcagcagtgttgggtctccgagcaacacc
atcggccggacgccaacacgccacacccccagcagaaccagccccctcacctctccaaca
aactgctcccacggaggactgtctccaagtcggttatggggttggggtgtcgacggactg
tcaaagcatccccctgcccctcctcctcctcctccaccccactccacccctgctgccccc
tccctaagggtcctgcgcagagcatactcacccagcatgatggaatatgacacagaaaac
atgaactctgacgagatctacagctcgctgcgaggcgtcaccgaggccatccagagcttc
agctaccggagccaggaggacttgaatgagccaatcagacaggagggcaagagggatgat
gctgcaggaagagagggtgtagcgtcctctcccggctctgatgcccgccttggcttagac
gtggtggaagggggtcgcactgccttagacaacaagacctcgctactgaacacgccatca
cctcgatcgttctctgggccacggagccgtgagttcgctccctatggttacggagaaacc
atctgcacatatgacaagagcgccctgaaggaggccgtctttgatgatgacgtggagcag
ttccgcgactgccgacgtcaggaaagtggtgaaaacaagatgacgctccccaaggtcttt
gctcctgcagtcggtcaggaccactcagacatggtagctgacctgctcaaggaattgtcc
aatcacaatgagcgatctgaggagcgtaaaggcgccctggtagatctgctgaagatcaca
cgagaagacagcctggctgtatgggatgagcactttaaaaccatcctcctccttctgctg
gagacactgggtgataaagatcacaccatccgagccctggccctgcgtgtgctcaaagaa
attctgaggaaccagccggcccgcttcaaaaactacgctgagctaaccatcatgaagacc
ctggaggctcacaaagactcccacaaggaggtggtgcgtgcagctgaggaggcagcatcc
accctggccggctccattcacccagagcagtgcattaaggtgctgtgccctattgtgcag
acagccgactacccaatcaacctagctgccatcaagatgcaaaccaaagtcattgaacgc
atcgccaaggactccttactgcagctgctgcctgacatcatccctggactcctacagggc
tatgacaacacagagagcagcgttcgcaaggccagcgtgttctgtctggtggctatctat
tctgtgattggcgaagatctcaaaccccacctggcacagctcacgggcagcaagatgaag
ttactgaacctgtacatcaagcgagcccagacgaccaacagcaatagcagcagctcctcg
gacgtctcctctcacagttaa
DBGET
integrated database retrieval system
