KEGG   Epinephelus lanceolatus (giant grouper): 117251513
Entry
117251513         CDS       T07331                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely04137  Mitophagy - animal
ely04144  Endocytosis
ely04145  Phagosome
ely04148  Efferocytosis
ely05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ely00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117251513 (rab5b)
   04145 Phagosome
    117251513 (rab5b)
   04137 Mitophagy - animal
    117251513 (rab5b)
   04148 Efferocytosis
    117251513 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117251513 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ely04131]
    117251513 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ely04147]
    117251513 (rab5b)
   04031 GTP-binding proteins [BR:ely04031]
    117251513 (rab5b)
Membrane trafficking [BR:ely04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117251513 (rab5b)
 Endosome - Lysosome transport
    117251513 (rab5b)
Exosome [BR:ely04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117251513 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   117251513 (rab5b)
  Exosomal proteins of colorectal cancer cells
   117251513 (rab5b)
  Exosomal proteins of melanoma cells
   117251513 (rab5b)
GTP-binding proteins [BR:ely04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117251513 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 B12-binding Tfb2_C
Other DBs
NCBI-GeneID: 117251513
NCBI-ProteinID: XP_033473791
LinkDB
Position
3:3679115..3688079
AA seq 216 aa
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagagggagtggaggccgctccaacggcacactaccgcagaccaagatctgc
cagttcaagctggtgctgctgggcgacatggctgtgggcaagtccagcctggtgctgcga
ttcgtcaagggacagttcgatgagttccaggagacgaccataggagctgcgttcctggct
cagtcggtgtgtctagacgacaccacagtgaagtttgagatctgggacactgcaggacag
gagcgataccacagcctggctccgatgtactaccgtggtgctcaggcagccattgttgtc
tttgacatcaccaagccggagacctttgagagagccaaggcctgggtgaaggagctgcaa
aggcaggccagtcccaacattgttattgccctggccgggaacaaggctgacctggcagag
aggagactagtagagtacgaggaggcccagacgtatgctgaagacactggcctgcttttt
atggagacctctgctaagacagctatgaacgtcaatgagctcttcctggccattgcaaaa
aagatgccaaaaacagacacccaaaaccctacacatgcagcgcgacaccggggagtcaac
ctccaggacccagacgcccactccacccgagcctgctgcggtgggaactaa

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