Epinephelus lanceolatus (giant grouper): 117251892
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Entry
117251892 CDS
T07331
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03030
DNA replication
ely03410
Base excision repair
ely03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117251892 (pole)
03410 Base excision repair
117251892 (pole)
03420 Nucleotide excision repair
117251892 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ely03032
]
117251892 (pole)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117251892 (pole)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117251892 (pole)
DNA replication proteins [BR:
ely03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117251892 (pole)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117251892 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
117251892
NCBI-ProteinID:
XP_033474341
LinkDB
All DBs
Position
4:24804777..24825385
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDQENQDDGSAMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SRKFQGKVAKLEVIPKEDLDLPNHLVGLKRSYVKLSFNTVDDLIKVKREVSPAVRKNRER
EQSNDTYTSMLSSALSGGNVTSADEEGMAKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRFRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAQSDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLEQVTNFNEV
CEEIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GASCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNRDEQAKHE
KKRLADYCKRAYKKTHITRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEMKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPATITYNIRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTSLEEVYASVAKVADYWLDVLYS
KAANMPDTELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAADIEDFGMPARPLQPAIPITTKRKRASQGEDSQVESQDVALTQSWREILGPPPP
TGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGHDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDMAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLTNLYTTERTALLEKTTEELLPPEKHNFEVRAEN
DAKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAVASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRL
GSTVVYGNFNRIMLCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSVMYGEDGAKQKKKSGEEGDEEGSEDEDEDRADVEEDDGDGETDEVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPIKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVNQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSADAQFCDPCNSYILP
EVICHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSY
TLQDLVCTKCKGVKEANMPLYCSCAGDFDLTFPAKSFSEQITVFRNIASHYNMSFLEETI
DWLLVMSPHISQSAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagtggacggtacagagcagaccggggacaaagtggaggagaccag
gaaaaccaggacgatggatccgccatgtccgccctcaagcggctggagcgcagccagttc
accgacgagatggacgctcgcttcggcttcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctactgagatcctggatgatgacaagaggatgatcagt
gctgtggactactatttcatacaggaggatggaagcaggttcaaggtggccctcccattc
aagccatatttttacatcgccactaaaaagaactgcgagagagaagtcatctcatacttg
tcgaggaagtttcaaggaaaagttgcaaagcttgaagtaatccccaaagaggacctggac
ctgccgaaccatctagtcggactgaagcgaagctacgtcaagctgtcattcaacactgtg
gacgaccttatcaaagtcaagcgtgaggtctccccagcagtgcgcaagaacagagagagg
gagcagtccaatgacacctacacctcaatgctatcaagtgccttatcaggtggtaatgtg
acgtcagcagatgaagaggggatggcaaagagtatctcagaccagttggacaacatagtg
gacatgagagagtacgatgtgccttatcatgtgcggttgtccattgacctcaagatccat
gtggctcactggtataatgttcgattcagaggcagtgcttacccaccagagattgtacgg
agggacgatcttgtggagcgaccagaccctgttgttttggctttcgacatagagaccacc
aaactgccgctgaagttcccagacgcacagagcgatcagataatgatgatctcctacatg
attgatggacagggctttttaatcacaaacagagagatcgtctctgagaacattgaagat
tttgagttcactcccaaacctgagtacgaggggcctttcactgtttttaatgaggatgat
gaggcggctctcattcagaggtggtttgatcacgttcaagaaaccaagccaaatatcttt
gtaacctacaacggagacttctttgactggccttttgttgagactcgggccgccttgcat
ggactgagcatgcacagagagatcggtttccagaaggatagccagggagagtataagtca
agtcaagccatccacatggactgtttgaggtgggtaaagagagacagctacctgccggta
ggaagtcataatctgaaggctgccgcgaaggctaaactgggctatgacccagtggagctg
gacccggaggagatgtgccgcatggcaactgaggagccacagactttagccacctactct
gtgtcagatgccgtggccacgtattacctgtacatgaaatatgttcacccctttatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggact
ctgtgtgaagctctgctcatggtgcaggccttccacgcgaacatcatctttcccaacaag
caggagcaggtcttcaacaaactcacagacgacggccacgtcatggactcagagacctac
gtgggcgggcatgtggaggcgctggagtctggagtgtttcgaagtgacatcccctgtcgt
ttcaagatgaacccagctgcgtttgacttcctgttgcaaagagttgagaagacgatgcga
catgccattgaggaagaggagaagattcctttagagcaagtcacaaatttcaatgaggtg
tgtgaggagatcaaaaagaagctgatttctctaaaggaggtcccgaacaggattgaatgc
ccccttatctaccatctggacgttggggcaatgtaccccaacatcatcctcaccaaccgc
ctgcagccatccgccatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgcctcctgccagaggaggatgacctggcaatggagaggggagatcatgcctgccagc
cgcagtgagttccatcgcatccagcagcaacttgagtctgaaaagttcccgccgtttttc
cccaacggtccacctcgggcctttcatactctcaacagggatgagcaggccaaacatgag
aagaaacgtctggcagactactgtaagagagcctataagaagacacacatcaccaggctg
gaggagcgagtcaccaccatctgccagagagaaaactccttctatgtcgacactgtgaga
gctttcagagatcggcggtacgagttcaaaggactccacaaggtgtggaagaagaaacta
tcggcagctcaggacagtggagacgctgccgagatgaagcgctgcaaaaacatggagatc
ctgtacgattctctccagttggctcacaagtgtattctcaactctttttacggctacgtc
atgaggaaaggggcgcgctggtactccatggagatggctggcattgtgtgctacacagga
gccaacataatcactcaggccagagagctcatcgaacaaatagggaggccccttgagttg
gacactgatggtatctggtgtgtcctccccaacaccttccctgagaactttgtggtgaaa
accagcaatgagaagaagcccaaggtgaccatctcttacccaggggccatgctgaacatc
atggtgaaggagggcttcaccaacgatcagtaccacgagctggtcgacccagcaaccatc
acgtacaacatcaggtcagagaacagcatcttctttgaggtggatggaccgtacctggcc
atgatcctgcccgcctccaaggaggaagggaagaaactgaagaaaaggtacgctgtgttc
aatgaggatggctctctggctgagctgaagggttttgaagtgaagagaagaggagagctc
cagctcattaagatttttcagtcatcagtgtttgaggcttttctcaaaggtacctctctt
gaggaggtgtatgcctctgtggccaaagtggctgactactggctggatgttctgtacagc
aaggctgccaacatgccagatacggagctgttcgaactgatttcggaaaatcgttcgatg
tccagaaaactggaggactacggagagcagaagtcaacttctatcagcacggctaagaga
ctggctgagttcctgggagaccaaatggtgaaagatgctggtctgagctgtcgctacgtc
atttccagaaaacctgagggttcacctgtcacagagagagccattcctctggctatcttc
caggccgagcccagtgtgaagaaacacttccttcgtaagtggttgaagatgcccagcctg
catgacttggacatccgctctatccttgactggagttattacatagagaggttgggcagc
gccatccagaaaatcatcaccatccctgcagctcttcagcaggttaagaatccagtgccc
agagtgaggcaccctgactggcttcacaagaaactcctggagaaaaatgatatctacaag
caaaagaaaatcagtgagctgttcaccagcgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagctgcagacatagaggactttggaatgccagccagacctctgcag
ccagccattcccatcactaccaaacggaagcgggcctctcagggagaggacagccaggtg
gagtctcaggatgttgcgctcactcagtcctggagagagatcctggggccgcccccacct
acgggaaaaacacgggaggagcgtctagtgtggctgcgttaccacaagaagaagtgggag
ctgcagctgaggcagaggaaggagaggaagaagaggaggaggctgctggatggtgaagct
caacccgtagggggaggagtgatcagagatggccccaccaccggcctgggaagcttcctc
cgcagaactgcacgcagcatcctggacatgccatggcaaattgtgcagattgcagagact
agtcaccccggtctgtacaagttatgggctgtaattggacacgacctccactgtatgaag
ctcaacatcccacgtgtcttctatgtcaaccagaaagtcccaaaacaggaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctccaacatcgtgtactacctttatgag
tactgtgtaccagaagacatgtaccaggagcacatcaatgagatcaacgctgacctgtcg
gccccagacattgaaggagtttatgaaacacaggtcccgttgctgtttcgtgcactggtg
cagctcggatgtgtttgtatggtcaataaacatgttgtgagggatatggccggcagggag
gccgacacttttgacctggagcacctggagatgaggtctctggctcagttcagctacctg
gagcctgggagcgttcgccacatgtacctgtatcatcacagtcagggtcacaaggctctt
tttggcctgttcatcccctctcagcgcaaagccagcatctttgtcctggacacagtcaga
agcaatcagatgcccaacctgactaacctctacacaactgaacgcactgctctcctggag
aagacgaccgaggagcttctgcctccagagaaacacaactttgaggtccgagctgaaaac
gatgcaaaggctatttaccgtgcactgcagcgcatactcctgaactacaaggaggagcgc
cgtgggccaaccctcattgctgtgcagtcaaactgggagctgcggcggttggcagcaggg
atgccggtgcttgaggagtttccagttgttccagtgcatgtggttgatgagatcagctat
aatgtgctggactggcaacgccatggcgcccgacgcatgatccgccactacctcaacctg
gacagctgcctgtcgcaggctttcgacatggccaggtattaccacttacctgttgggaac
ttgcctcaggatgtgtccatctttggctcagacttgttcctggcacgacatctacggaaa
cacaaccacctgctgtggctctcacccacagccagacccgacctgggaggaaaagaggct
gatgacagtcgtcttgtcatggaaagtgatgacaggggctccgtggagatcaatgctcaa
ggatgttattccacagtgtgtgtggagttggacctgcagagcctggcagtgaacaccatc
ctccaatcacagcatgtcaatgacatggaaggtggagctagtctgggtgtcagctttgat
gtgatccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctgtc
gctagctacgatgagaccgctctctgctccaacaccttcaggatcttgaagagcatggtg
gttggttgggtcagagagatcacgcagtaccacaacgtgtatgcagacaaccaggtgatg
cacttctaccgctggctgcgctcccccagctctctgctctatgaccctgcactgcaccgc
accctgcacaacatgatgaagaaggtgttcctacagttggtgtcagagttcaaacgtctc
ggctccactgtggtgtatggaaacttcaacaggatcatgttgtgcacaaagaaacggagg
atagatgatgccattggctatgtggagtacatcaccaacagcatccactccagagaaatt
ttccactctttgtccatctccttctcccgatgctgggagttcctgctgtggatggatccg
gccaactatggcggtgtgaagggtaaactgccctccagcgtcatgtatggagaggatgga
gccaaacaaaagaaaaagagtggcgaagagggagatgaggagggcagtgaggatgaagat
gaggatagagctgatgttgaggaagatgatggtgatggagagacagatgaggtggaggag
ctgattgagagcaactggaacatcatgcagtatctgccccaaactgcctcctgtcaaaaa
tacttcctcatgatcgtctctgcctacattgcagcggtctaccacagcatgaaagaggag
ctgagacgtaacgctcctggagcaacaccaatcaagagacgtggaggcagccaggcttcc
cagcaggccgtgggggatttgagcgctcttcctggaatgatctccttctcccaggaatat
gtgtccagcgagctgacacagaactttttcaccatcactcaaaaaatccaaaagaaggtg
acgggtaccaggagtgtcaaccagccctcggaaatgttccccgtcctgcctggatcccac
ctgccgctcaacaacccagcactggagtttatcaaatatgtctgccaggtcctgtcactg
gatgccaacatagtgaaccaggtgaacaagctgaagagagacctcctgcgtctggtggac
gttggagagttttcagcagatgctcagttctgtgacccctgtaactcctacatcctgcca
gaggtcatctgccaccactgcaatttctgtcgtgaccttgacctctgcaaggacccatct
gtggcgcaagatggatcagtgttgcctcagtggttctgctccaactgccaggcgcagtat
gagactgagtctattgagatggctctggtggaagctttgcagaagaaactgatgagctac
acgctgcaagacctggtgtgtacaaaatgtaaaggagtgaaggaagcaaacatgccgctg
tactgcagctgtgccggagactttgacctcactttcccagccaagagcttctctgagcag
atcacagtgtttcggaacatcgcgtcccactacaacatgagcttcctggaggagaccatt
gactggttgcttgtaatgagcccacacatcagccagagcgctcactga
DBGET
integrated database retrieval system
