Epinephelus lanceolatus (giant grouper): 117252186
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Entry
117252186 CDS
T07331
Symbol
smn1
Name
(RefSeq) survival motor neuron protein 1
KO
K13129
survival motor neuron protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117252186 (smn1)
Spliceosome [BR:
ely03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
117252186 (smn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMN_YG-box
SMN_Tudor
SMN_G2-BD
TUDOR
BUD22
Vma22_CCDC115
DUF5321
Motif
Other DBs
NCBI-GeneID:
117252186
NCBI-ProteinID:
XP_033474789
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All DBs
Position
4:complement(28514123..28518072)
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AA seq
284 aa
AA seq
DB search
MANGCKDVLFTRGTGQSDDSDIWDDTALIKAYDKAVASFKTALKGEDEPQAASSEKNHPG
KKRKNNKKNQSRKRTNAPPDKEWQVGDSCSAYWSEDGQLYAATISSIDEKRGTCVVVFTG
YGNEEEQNLEDLLSEISEGDEETNTKEAESSTEESDRSTTPNQHKQQPHSKPQKSKAHRE
PPPMWGPGFPGFPPGPPPMHAFRPGGSRRSGGGHGPVPPSWPPMMPFGPPMIPPPPPMSP
DMVDDEALGSVLISWYMSGYHTGYYLGLKQGRKEAANWTKLHHK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatggatgcaaagacgtgttgtttacacgcggaactggacagagtgatgattcg
gatatatgggatgacacagcattgataaaagcttatgacaaggcagttgcatcattcaag
actgccctcaagggtgaagatgagccacaagctgcatcctctgagaaaaatcatccagga
aagaaacgcaaaaacaacaaaaagaaccagagtaggaaacgaaccaatgcaccaccggat
aaagagtggcaggttggggactcgtgcagtgcatactggtcagaggatggccagctctat
gcagccaccatctcgtccatagatgagaagagaggcacttgtgtagttgtgtttacggga
tacggcaacgaggaggagcagaaccttgaagacttgctttcagagatttccgagggtgat
gaggagacaaatacaaaggaggcagagtcgtcaacagaggagagcgacaggtcaactaca
ccaaaccaacacaaacagcaacctcacagtaaaccccagaagtccaaggctcacagagaa
cctcctcctatgtggggtcccggcttccctgggtttcctccgggcccacctcccatgcat
gctttcagaccgggtggaagcagacgatctggtggtggtcacgggcctgtacctccatcc
tggcctcccatgatgccttttggcccaccaatgatccctccacctccaccgatgagtccc
gacatggtggatgacgaggctctgggcagcgtgctcatctcctggtatatgagcggatat
cacacgggatactacttggggttgaagcaaggacgcaaagaagccgccaattggacgaaa
ctgcaccacaaatga
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integrated database retrieval system
