Epinephelus lanceolatus (giant grouper): 117252196
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Entry
117252196 CDS
T07331
Symbol
si:dkey-32e23.4
Name
(RefSeq) dynamin-1-like protein isoform X1
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04217
Necroptosis
ely04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117252196 (si:dkey-32e23.4)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117252196 (si:dkey-32e23.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117252196 (si:dkey-32e23.4)
03029 Mitochondrial biogenesis [BR:
ely03029
]
117252196 (si:dkey-32e23.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117252196 (si:dkey-32e23.4)
Enzymes [BR:
ely01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
117252196 (si:dkey-32e23.4)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
117252196 (si:dkey-32e23.4)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
117252196 (si:dkey-32e23.4)
RhoA-dependent endocytosis
117252196 (si:dkey-32e23.4)
Mitochondrial biogenesis [BR:
ely03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
117252196 (si:dkey-32e23.4)
Retention of mitochondria
117252196 (si:dkey-32e23.4)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117252196 (si:dkey-32e23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
117252196
NCBI-ProteinID:
XP_033474805
LinkDB
All DBs
Position
4:29267192..29277017
Genome browser
AA seq
673 aa
AA seq
DB search
METLIPTINRLQEVFLTVGAEIIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVAPLKERLKTESGNGVKQNAQISYPGVKAEEWGTFLHCKNQIFTDFQEIRR
EIEAETERSTSENKGISPEPIYLKIFSPKVLNLTLVDLPGITKVPVGDQPEDIDAQVQEM
ILSFISNPNSLILAVSPANSDLATSDALKLAREVDPDGRRTLLVVSKLDLMDAGTDALEV
LLGRVIPVRLGIIGVVNRSHHDINTQKSLEDSMKDEQAFLQRHYPSIASRAGSRYLAKTL
SRLLMHHIRDCLPELKTRVTVLSAQYQARLNGYGQPVEDHSATLLQIVTKFASDYCNTIE
GTARYIQTSELCGGARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVP
EVSFELLVKRQIKRLEEPSMRCVELVHEELQRIIQHCSSFSTQELLRFPKLHDSIVEVVT
GLLRKRLPITNEMVHNFVSIELAYINTKHPDFTDAAQVSASVNSQQAEALDGGKRWKNEK
VAEERIPTAGFGSPSKGQAINLLDTAVPVSRKLSAKEQRDCEVIQRLIKCYFLIVRKSIQ
DSVPKTVMHFLVNFVKEHLQSELVGQLYKQPLLQELLIESQDTAQQRTEVAQMLEALKKA
NNIISEIRETHLW
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctaattcccaccatcaaccggctgcaggaagtcttcctcacagtgggtgca
gagatcatacagctgccccagatagtcgtggttggatctcagagcagtggaaagagctct
gtgttggagagcctggtcggacgggatttcctgcctcggggatcaggaatagtcacaaga
cgacctctcgtgttgcaacttgttaatgttgcccctctgaaggagagactgaagacagag
agtggaaatggggttaaacaaaatgcccaaatcagctacccaggtgtcaaagctgaagaa
tggggtacattcctgcattgcaagaaccagatcttcacagattttcaggaaattcgtcgg
gaaattgaagcagagactgagcgcagtactagtgaaaacaagggaattagtcctgagccc
atatatttgaagattttctcccctaaagtccttaatctcaccctggttgatttacctgga
atcacaaaggttcctgttggggaccagccagaggacattgatgcacaagtacaagagatg
atcttgtccttcatctccaatccaaactccctcatcctcgcggtgtcccctgccaactct
gacttggccacctctgatgctctgaaattggctcgtgaggttgatccagatggtcgtcgt
acactgctggtggtcagtaagttggacctgatggatgcagggactgatgctctggaggtc
cttctgggtcgagtcattccagtcagacttgggattatcggggttgttaacaggagccat
cacgatatcaatactcagaagagcctggaggactcgatgaaggatgagcaggctttcctg
cagcgacactacccctcaattgcctcccgcgctggctcccgctatctggccaaaactctc
agcaggctgctcatgcaccacatccgggactgcctgccagagctcaaaacccgagtgacc
gtactgagtgcccagtaccaggcgcgactcaatggctacggccagccagtagaagaccac
agtgccacactgctgcagattgtcacaaagttcgccagcgattactgcaacaccattgag
ggaactgccagatacatccagacctcagagctctgcgggggtgctcggatctgttacata
ttccatgagacctttgggcgcactttgcagtccatcgaccccctgggaggactgactgag
cttgatatcctcactgccatccgcaatgctacgggtccacggccagcactttttgtgcct
gaggtgtcctttgagttgttggtgaagcggcaaattaagcggctggaggagcccagtatg
cgctgcgtagagctggttcatgaagagctgcagcggatcatccagcactgctcctcattt
agcacacaggagctcctgcgattccccaaactgcacgattccattgtggaagtggtgact
ggattactgaggaagcgcttgccgattactaatgaaatggtgcacaattttgtatcaata
gagctcgcctacatcaacacaaaacatccagacttcacagacgcagcgcaggtctctgca
tctgtcaacagtcagcaggcggaagcccttgatggaggaaagcgctggaagaacgagaag
gttgcagaagagagaatcccgactgcaggctttggcagtcccagcaaaggccaggccatt
aacctccttgacacagcggtgcccgtatcccgcaagctgagcgcgaaggagcagagggac
tgtgaggtcatccagcgcctcatcaagtgctacttcctcattgtccgcaaaagcatccag
gacagtgtgcccaagacagtgatgcacttcctggtgaactttgtgaaagagcatctgcag
agtgagctggtgggtcagctttacaaacagccactgctgcaggagctgcttattgagtcg
caggacacggcacagcagcggaccgaggttgctcagatgcttgaggcactcaagaaagcg
aataacatcatctctgagatccgggaaactcatctgtggtag
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