Epinephelus lanceolatus (giant grouper): 117252238
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Entry
117252238 CDS
T07331
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117252238 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117252238 (smarca2)
03036 Chromosome and associated proteins [BR:
ely03036
]
117252238 (smarca2)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117252238 (smarca2)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117252238 (smarca2)
Chromatin remodeling factors
BAF complex
117252238 (smarca2)
PBAF complex
117252238 (smarca2)
GBAF(ncBAF) complex
117252238 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
117252238
NCBI-ProteinID:
XP_033474870
LinkDB
All DBs
Position
4:complement(7683513..7759587)
Genome browser
AA seq
1583 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYPMHKTMEGMNEKTIADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGGGPTPPHMPPSQSGPMMPMDPQTAVPNMSNMSQ
QGRGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQQQQA
PTASPYSRPPGMPMAPLGGPQSSPCPTPTMQGHNQSTGPKPWSDGQVGENQASAQKHLTP
VASGRPSPAPPQAAPVPAGPMPGSSVTPQPPGQQVSPMLQMQKQNRVTPIQKPQGLDPVG
ILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMR
RDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKD
FKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQK
KDKRLAYLLQQTDEYVANLTTLVHEHKAAQAAKEKKRRKKKKKKLDGDGEGPSAIGPDGE
PMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEF
EEEEEEEGAKPETEEKKIIDPNEDEVLGAAAKDIIETAKQDVDDEYSVPTGQTSSQSYYG
VAHAVIERVEKQSSLLINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALI
TYLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPVLRRGLVPQLRSGKF
NVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTP
LQNKLPELWALLNFLLPTIFKSCTTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLR
PFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKT
LMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGFISGLDLYRASGKFELLDRILPKLQA
TSHRVLLFCQMTSLMTIMEDYFSYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLL
STRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKI
LAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEEEDEIPDDETLNQMIA
RNDDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDEAEVERLTYEEEEEKMF
GRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDDGGS
KTKKKRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYY
ELIRKPVDFKKIKDRVRSHKYRGVGDLERDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFK
SARQKIAKDDESDDDSDEDEDDEDESEAEAKSVRVKIKLSKEARSHDKGKKRQSRGKAKP
VVSDDDSDEDLDDNDQSDKSDDE
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacatcaggtggtatgtcccatcctggcccttctccgggggca
ggtctatccccagggcccattttgggccctagccctggtccagacccctccccaggctct
gttcacagcatgatgggacccagcccaggacctggaacacccaacgcacctcatggcatg
cagggacagggacaaagtgactattctcaggacagcatgtatcctatgcacaagacaatg
gagggaatgaatgaaaagaccattgcagatgcaatgcactttggtcacatgaaaggtgtg
gggatgagatctctgcatagtggtatgggacctccacagagtccaatggatcagcacagc
caaggatacatgtcccctcatccatcccccatgggtgtccatgagcatgcctctagtccc
atgtcaggaggtggaggtggtgggggacccacgcctccccacatgcctccctcccagtca
ggccctatgatgcccatggatccccagacagccgtgcccaacatgtccaacatgagccag
caggggcggggaccttctgctttcagtccagtccagctgcagcagctcagagctcagatc
cttgcctataagatcctgggtcgtggacaacccttacctgaaaaccttcaactggctgtt
cagggcaagaggagcctacccacaatgcaacagcagcaacagcaacaacagcagcaggca
cctactgctagtccttacagcaggcctccaggtatgccaatggcacctttgggtggtccc
cagtcaagtccctgccctaccccaaccatgcaaggacacaatcaaagcacaggacccaaa
ccgtggtctgatggtcaggttggtgaaaatcaagccagcgctcagaagcacctcactcca
gttgccagcggacgcccgtcccctgcaccacctcaggctgcgccagtgccagcaggaccc
atgccaggcagttcagtgacccctcagcctcctgggcagcaggtgtcccccatgcttcag
atgcagaaacagaaccgcgtcacaccaatccagaagcctcagggcctggacccagtgggg
atcctgcaagagagagagtacaggttgcaggctcggattgcacaccgaatccaggagctg
gaaagtttgccaggctctctgccccctgatctgaggactaaagccacagtggagctcaag
gcgctgcgtttactcaacttccagcggcagctgagacaggatgtggtggcatgtatgagg
cgagacacgaccctggagacggccctcaactcaaaggcttacagacgcagcaagcggcag
acgctgagggaggcccgcatgaccgagaagctggagaagcagcagaagctcgaacaggag
aagaagcgcagacagaaacatcaggagtatctcaacagtatccttcagcatgctaaagac
ttcaaagagtatcaccgctcagtgtctggcaaaatgcagaaactcaccagagccatcgcc
acctggcacaccaacacagagcgggaacagaagaaggagactgagagaatcgagaaggag
aggatgaggagactgatggcagaagatgaggaaggctaccgaaaactcattgaccaaaag
aaagacaagcgtctggcctacttgctgcagcagacggatgaatatgtggccaacctcacc
accctggtgcatgaacacaaagctgcccaagctgccaaggagaagaaaaggaggaagaag
aaaaagaagaagttggacggagatggtgaaggccccagtgccattggacctgatggagag
cccatggatgagagcagccaaatgagtgaactgccagtcaaagtgattcagacagagact
gggaaagttttgcagggaacggatgctcccaaatccagccaactggaggcctggcttgag
atgaaccctgggtatgaggtcgccccacggtcagacagtgaggagagcggctcagagttt
gaggaggaggaggaagaggagggggccaagccagaaacagaggagaagaagataatcgac
cccaatgaagatgaagtgctaggggcggctgcgaaggatattatcgagacagccaagcaa
gatgtggatgatgagtacagtgttcccactggacaaaccagctcccagtcttactatggt
gtggcccatgctgtcattgagagggtggagaagcagtcgtcgctgctgatcaacggcaca
ctcaaacattaccagatccaggggctggagtggatggtgtccctgtacaacaacaatcta
aacggcatcctggctgatgaaatgggcctcggcaaaaccatccaaaccattgccctaatc
acctacctgatggagcacaagaggatcaacggtccctttctgatcattgttcctctctcg
actttgtctaactgggtctatgagcttgacaagtgggctccctctgtggtcaaaattgct
tacaagggcacccctgtgttgcgccgtgggcttgtgcctcaactccgcagcgggaagttc
aacgtcttgctgaccacctatgaatacatcatcaaggacaagcacatactggccaagatt
cgttggaagtacatgattgtggatgagggtcaccgcatgaagaaccaccactgtaagctg
acccaggtgttgaacacacactatgtggctccccgacgcctccttctcactggtacacca
ctgcagaacaagcttcccgagctgtgggcgctgctcaacttcctcctgcccaccatcttt
aagagctgcaccaccttcgagcagtggttcaacgcccccttcgccatgacaggagagagg
gtggacctaaatgaggaggagaccatcctgattatccgacgtttgcataaggtgctccgc
cccttcctgctacgcagactgaagaaagaggtggagtctcagctgccagagaaggtggag
tacgtcgtaaagtgtgacatgtctgccatacagaaggttctgtatcgccacatgcagaaa
ggcatcctcctcactgacggctcagagaaagacaagaagggcaaaggaggagcgaagacc
ctaatgaacaccatcatgcagctgaagaagatctgcaaccacccatacatgttccagcac
attgaggaatcctttgctgagcacttgggctttccaaacggcttcatcagcgggcttgat
ctgtatcgagcttctgggaagtttgagctcctggatcgcatcctgccgaagctgcaggcc
accagccaccgagtcctgctgttctgccaaatgaccagtctgatgacaatcatggaggac
tacttcagctaccgcaatttccagtatttacgtctggatgggaccaccaaatctgaggac
cgagcagcactgctgaagaaatttaatgaagaaggatcacagtacttcatcttcctgctc
agtaccagagccggcggcctcggcctcaacctgcaggctgctgacactgtcgtcatcttt
gacagtgactggaacccacaccaggaccttcaggctcaggaccgggctcaccgcatcggt
cagcagaacgaggtacgtgtgcttcgcctctgcaccgtcaacagtgtggaggagaagatc
ttggcagccgccaaatacaaactcaacgtggatcagaaagtcatccaggcgggcatgttt
gaccagaaatcctcgagccacgagcgccgtgccttcctccaggccattctagagaccgag
gaacagaatgaggaggaagatgagatacccgatgatgaaactcttaatcagatgatagcc
cgcaatgatgatgaatttgagctctttatgcgcatggacatggaccgacgccgcgaggac
gccaggaacccgaagcgtaagcctcgtctcatggaggaggacgagttgccttcctggatc
atcaaagacgaagccgaggtcgaacggctcacgtatgaagaggaggaggagaagatgttc
ggacggggatcgcgctgtcgtcgggacgtggactacagcgacacgctgactgaaaaacag
tggctgcgggctatcgaggatggaaacctggaagagatggaagaggagatccggcttaag
aagcgcaaacgcaagagacgtcaggacaaggactcatcgagcagagacgacggaggctcc
aagaccaagaagaaacgtgggcgtccaccagctgagaaactctctcccaaccccccgaaa
ctcaccaagcaaatgaatgccatcatcgatacggtcatcaactacagagacgggtctgga
agacaactaagcgaagtgttcgtccagttaccatccaggaaggagctccctgaatattac
gagctgatcaggaaacctgtggacttcaaaaagatcaaggatcgtgtgaggagccataaa
tacagaggggtgggagacctggagagggatgtgatgctgctttgtcacaacgcccagacc
ttcaacctggagggatcccagatatatgaggactccattgtccttcagtctgtgttcaag
agtgccaggcagaagattgccaaggatgacgagagtgatgatgacagcgatgaggatgag
gatgacgaggatgagtcagaggctgaggccaagtctgtgcgggttaagatcaagctgagt
aaggaggcgcgcagccacgacaaaggcaagaagaggcaaagccgagggaaggccaagccg
gtggtcagcgacgacgacagcgacgaagacctggatgacaatgatcagtcggacaagagc
gacgatgagtga
DBGET
integrated database retrieval system
