Epinephelus lanceolatus (giant grouper): 117252412
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Entry
117252412 CDS
T07331
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04137
Mitophagy - animal
ely04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117252412 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117252412 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117252412 (vcp)
03009 Ribosome biogenesis [BR:
ely03009
]
117252412 (vcp)
04131 Membrane trafficking [BR:
ely04131
]
117252412 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117252412 (vcp)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117252412 (vcp)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117252412 (vcp)
Membrane trafficking [BR:
ely04131
]
SNARE
SNARE associated proteins
Others
117252412 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117252412 (vcp)
Exosome [BR:
ely04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117252412 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
Vps4_C
RNA_helicase
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
117252412
NCBI-ProteinID:
XP_033475153
LinkDB
All DBs
Position
4:25187410..25197544
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGTGGTGSNPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggggaatccaaaaatgatgatctagccactgcgattctgaaacagaag
aacagacccaacagactgattgttgatgaatccatcaatgaagacaacagtgtggtctct
ctttctcagaccaaaatggacgagctgcagctcttccgtggagacacagtgctgatgaaa
ggaaagaagaggcgggagactgtgtgcattgtgctgtctgacgacacctgctccgatgaa
aaggttcgcatgaacagggtggtccgcaacaatctgagggtccggctgggtgatgtcatc
agcattcagccatgtcctgatgtgaagtacggaaagaggatccacgtcctcccaatagac
gacacagtagaaggaattactggaaacctgtttgaagtctacctgaagccatactttctt
gaggcttacaggccaatccgcaaaggtgatattttcctggtcagaggaggcatgcgtgct
gtggagttcaaagtggtagagaccgacccctctccctactgtatcgttgctcctgatacg
gtcattcactgtgaaggagagcctatcaggagagaggatgaggaagagtccttgaatgag
gtgggctacgatgacattggaggagtgaggaagcagttagctcagatcaaagagatggtg
gagctgcctctgagacaccctgcactgttcaaggccataggagtcaagcccccacgtgga
atcttgctatatggaccccctggaactggaaagaccttgatcgccagagctgtagccaat
gaaactggagctttcttcttcctgatcaatggtcctgagatcatgagtaagctggcagga
gagagcgagagtaacctgagaaaggcctttgaggaagcagagaagaatgctcctgccatc
atctttattgatgagcttgacgcaattgcccctaaaagagagaagactcacggagaggtg
gagaggcgcattgtttcccagctgctgactctaatggacggcctgaaacagagagctcat
gtcatcgtcatggctgccaccaacagacccaacagcattgacccagccctcaggagattt
gggcgttttgatagggaagtggacattggcatccctgacgccacaggcagactggagatc
ctccagattcacaccaagaacatgaaactggctgacgatgtcgacttagaacaggtagcc
aatgaaacccatggacacgtcggtgcagatctggctgctctttgctctgaggctgccctg
caggccatcaggaagaagatggacctgatcgaccttgaggacgagacaattgatgctgaa
gtcatgaactcacttgctgtcactatggatgacttcaagtgggccctgagccagagcaac
ccatctgcactgagggagacggttgtcgaggttccaaacatcacctgggaggacatcgga
ggtctggatgatgtcaagagggagctgcaggagttggtgcagtacccagtggagcaccca
gacaagttcctcaagtttggcatgaccccatccaagggtgtgctgttctatggcccccct
ggttgtggtaagactctgctggccaaagccatcgccaatgagtgccaggcaaatttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagagtctgaggccaatgtcaga
gagatctttgacaaggctcgtcaagcagccccatgcgttctcttctttgatgagctggac
tccatagccaaggcccgtggcggcaacgtgggagatggtggtggagcagctgaccgtgtc
atcaaccagatcctgactgagatggatggaatgtccagcaagaagaacgttttcatcatc
ggagccacaaacagaccagacatcatcgaccctgccatcctgagacccggccgtctggat
cagctcatctacatcccactgcccgacgagaagagcaggatgagcatcctgaaagccaac
ctccgcaagagccccatcagcaaggatgtggacttggacttcctggcaaagatgaccaat
ggcttctctggagcagatctgacagagatctgccagcgggcgtgtaagctggccatcaga
gagagcatcgagaatgagattcgcagagagagggagaggcagaccaacccatcagctatg
gaggtggaagaggatgatcctgtgccagagattaggaaggaccacttcgaggaggcaatg
cgattcgcccgtcgctccgtcagtgacaatgacattcgcaaatacgagatgttcgctcag
acactgcagcagagccgtggttttggcagcttcaggtttccctccagtgctgcaggaggc
agtggtcccagtcatggcacaggaggaactggcagcaatccagtgttcaacgaagacaac
gacgatgacctttatggataa
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