Epinephelus lanceolatus (giant grouper): 117252444
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Entry
117252444 CDS
T07331
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117252444 (gapvd1)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117252444 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
117252444
NCBI-ProteinID:
XP_033475227
LinkDB
All DBs
Position
4:31454786..31491885
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AA seq
1486 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQSVTHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLVLVDFVR
NVMAGDHLREEEHMALETLVANVPHSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTTLSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGTGPQSVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGAHHLTS
PPSQADSLLAMFDPLSSGEGSSTGTIVRPKVHYARPPHPPPDPPIPEASALGQETRHSLF
TPHCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAAEERDPAGAFA
LGPSSSPSKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPIAA
FRKRDKHEKDDIVPERVPQDDPLPRQSSQAQAAEDILDKYRNIKRTSPSDGATGGASYDG
TGDLCVEDSVHDSPREDTLQNISTDDLPDSASQTAQQHDSKFSFSDAKKKLRLALCSADS
VALPIMAPATTRNGLPDHMDSEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSRFD
ARTCRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTV
CVRLLLEHMESRMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQD
AQMAIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLTKVVTANHKALQIPEVYLKEA
PWPSAQSEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIR
ANPPCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagatatccacactctggcccaccacctgaagcaggagcggctgtatgta
gcgtcggagaagcagctcatccagaggctcaacagtgatgtgctgaagacagccgagagg
ctgtaccgggctgcatggatcgccaagcagcagaggatcaacctcgatcgtctcattctc
accagtgcggaggcttctccggctgaatgctgccaacatgccaaaatgctggaagacacc
cagtttgttgatggctacaagactctgggcttccaggagacaatctatggcgagttcttg
gccaggttaagggagaaccctagactggtggcttcctgtttggtggcaggcgagaggctg
aaccaggagcacacccagtcagtcacccatacagtcttcacctctctttatggcaactgt
attatgcaggaggatgagagctacctgttacaggtgttgcgatacctggtggagtttgag
ctgaaagagagtgacaaccctcgccgcctactgcgacggggaacctgtgccttcagcatc
cttttcaagctcttctctgagggcctgtactcagccaagctcttcctcactgccaccctc
catgaacccattatgcagctgctggtggaggatgaagaccacctggagactgacccagcc
aaggtgacagagcgcctcactccggcccagcaggaacgcttcggagagaagggctctgag
ggctacaaacaaagggtgcaggcagctgtggaggccaatgaggccaagctggtggctctg
gtcaacaaatttattggttacctgaagcagaacacctactgctttccccacagcctgcgt
tggattgtgtcgcagatgtacaagactttgtcatgtgtggagcgtcttgaggtgggcgag
gtgcgcaccatgtgtacagacctgctgctgacctgcttcatttgcccagctatagttaac
ccagagcagtatggtatcatctcagatgcccccatcaatgaagtagcccgcttcaatcta
atgcaggtggggcagcttttgcagcagttggccatggctgatgatgatgcagacccaagg
cggaaaagcagtttgtccaaatttgataagagttgtgttgctgcctttctggatgtggtg
attggaggaagagcagttgagaccccacccatgtcctcaatgaaccttttggaaggcctc
agtaggactgcggtctatatcacacataatcagctgctggtgctggtggactttgtgcgg
aacgtgatggcaggggaccaccttcgggaggaggagcacatggctctggagaccctggtt
gccaacgtgccccattctcgaactgtgaagagcaacagtctggagctcactccctccaac
accccccagctctccccggctaccactcctgccaacaagaagaacaggctccccatagga
caacacttagctgctataacatcctgggaccccacaaccaccactctgtctgctcacatt
ccattagtaaccccttttgcagctgctcgcagccgcagccgtaccaacatagcccaggag
ggggaggcagaggccagctcccaagagtccctacaggagctgatgccagaggaggtgctg
gtgatttcactaggaactggcccacagtctgtccctgggatgatgtcagagaatgaggta
ttgaacctgcagatggctgatggagcccagggggatggccatgctgatgataccaagctg
catggtaaaccagacaaaactctgcgcttctccctttgcagtgacaacttggaaggcatc
tcagagggcccatccaatcgttctaactctgtgtcatctctggacctggagggagagtct
gtttctgagcttggagccggaccatcagggagcaacggggtggaggctctacagcttttg
gagcatgaacaggctactactcaggacaacctggatgacaaactgcgcaagtttgagatt
agagacatgatgggtctaacagatgatcgcgacatctctgagacggtcagcgaaacctgg
agcactgacgtgctcggcagtgactttgaccccaacatggatgaagatcggctgcaggaa
atagcaggggcagctgcggagaacatgctcggcagcctgctgtgtcttcctggctcgggt
tcagtactgctggacccctacggctccaccatctcagagaccacaagcgaggcctggagc
gtggaggtccttcccagtgactcagaagccccagacctgaagcaggaggagcgcctgcag
gagctggagagctgctcaggggttggcagtacctctgatgacacagaggtcagagaggtc
agctcgagacccagcacaccaggtctcagtgtcgtctcaggcatcagcgcaacctcagaa
gacatccccaacaagatcgaggacctgcggtcagagtgcagctcagactttggagggaag
gactctgtgaccagtccagatggggaggagtcaggccacggagcacaccatctgacatct
ccaccgtcacaggctgattccttactggccatgttcgatcccctctcctccggtgaaggc
tcctccactggcacaatagtgaggcccaaagtgcactatgccaggccccctcaccctccc
cctgatcctcccatccctgaagccagtgccctggggcaggagacgcgccactctctcttc
acgccccactgcctggcccaggctgagctggagcacaccaagcagcgccactccttccct
gacaggctggtccgtagccgcagctccgacatcgtgtgcccaggccgccggcccacaagt
gaccccggccttaaccggcgggtcgcggccgaagagcgcgaccctgccggggccttcgcc
ttaggaccgtcctcatcccccagcaaggactccctgaaaggggaggttgaggacaggaaa
gacagtgacgatgagaagtctgatcgcaacaggccatggtggaagaaacgttttgtgtca
gccattcccaaagtgctgtattggacggctgagagtgatgtcccagcgcccatagctgca
tttcggaaaagggacaagcacgagaaagacgacattgtcccggagcgtgttccacaagat
gacccgttgcccagacagagctctcaagcacaggcagctgaagacatcctggacaagtac
aggaacatcaaaaggaccagcccaagtgatggagccacaggcggagcttcttacgatggt
acaggagatctgtgtgttgaggacagcgttcacgactctcctagagaagacactctgcag
aacatctccacagatgacctcccagactcagccagccagacagcacagcagcatgactcc
aagttctctttcagtgatgcaaagaagaagttgcggttggcgttgtgttctgcagactca
gttgctctgcccatcatggctcctgcgaccacacgaaatgggctgcctgaccacatggac
tctgaagacaatgagatcgtctgcttcctgaaggtccaactggcagaggccatcaacctt
caggataagaaccagatggcccagatccaggagaccacgcgctgtgtcagccgcttcgac
gcacgcacctgcaggaagctgctggctgccattgcggaggattacagaaagcgagcgcca
tacatcgcttatctaaccaggtgtcgtcagggcctgcagacctctcaggcccacctggag
aggctcctccagagggtgctgagagacaaggaggtagctaaccgctacttcaccaccgtc
tgtgtcaggctccttcttgagcacatggagtccaggatgcttgacttcatcaaagcgttc
caggggtgcacagcagcggatgacaagacagcagcagtggaggattttctgcgctacttg
tatggcgccatggcccgtgatgccatttggcagtacgctagcgaggaccagctgcaggac
gcccagatggctatcgagcgcagcgttatgaaccgcatcttcaaactggccttctacccc
aaccaggatggagatattctcagagaccagcttttccacgaacatatccagcggctcaca
aaagttgtgacggccaatcataaagctctgcaaatcccagaggtttacctgaaggaggct
ccctggccctctgcacagtctgagatcaggaccatcaatgcatacaagacaccacgagac
aaagtccagtgtatactgcgcatgtgttccaccatcatgaacctcctcagtctggccaat
gaagactcagtccctggagcggatgactttgtccctgtgcttgtctttgtcctcataagg
gcaaacccgccctgcctgctgtccaccgttcagtacatcaataatttctatgccagccgg
ctgagtggggaggagtgctattggtggatgcagttcaccgcggcggtggaattcattaag
accatcgacgatcgcaagtga
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