Epinephelus lanceolatus (giant grouper): 117252457
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Entry
117252457 CDS
T07331
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04010
MAPK signaling pathway
ely04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117252457
04020 Calcium signaling pathway
117252457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117252457
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117252457
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
117252457
NCBI-ProteinID:
XP_033475249
LinkDB
All DBs
Position
4:complement(45226889..45608641)
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AA seq
1863 aa
AA seq
DB search
MSMKMYGLGPQNYFHSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVHGGMFSSIYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAINKKLALQKAKEVKEVSPMSAANISITAFLTRSRGNAHSS
NSSICSVNSLSYVCTPVHHYLSKEQQKSMKTMSVWEQRANQLRRQNQASCEALYSELELE
EHLRLSSALHIRPDMKTHLDRPLVVEPHDGPFLASHQHHHHKPCMPEEADTADDPPPPVP
HHPRRHHRHRDRYRARTREEMNDNGGTSKGEGHHVHHSSSKDHNGSRGKDGRCERSHSRE
RGRRHHHQSSMDDSGGGGVMCEREHWHHHSHRQSRGGIGTVNSGGRGALRYCHKDGHSSN
RDGERNPRGDSGANGERRRQRSHGSRDQATVKGEESNEREKTHSHGDRFCDPGGDSLAIS
PLQGSGGSIWPPDQPEDSDNQRNVRRTGQTSIQIPPVTITSPPGETTLIQMNSIDCETMP
MNEKSLGDLGQSGPKPILPYSSMFIFGQTNPVRRLCHYIVSLRYFEMSILVVIAMSSIAL
AAEDPVWTNAPRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVV
SGALVAFAFSSFMGGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVL
NILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLEKDCKGQFLDYDKDEVAAMPREWKK
YEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDTGPSPGYRIEMSIFYVVYFVVF
PFFFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPENTHSFQYR
MWKFVVSAPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKNLNIVFTTLFSLECILKII
AFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGY
TIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQ
ALMLLFRSATGEAWHEIMLSCLSHRACDERSGSHGKECGSDFAYFYFVSFIFLCSFLMLN
LFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLG
LGKKCPPRVAHKRLVKMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLCDAELK
KELSTVWPSLSQKTMDLLVTPHKPNELTVGKVYAALMIFDYYKQNRARRLQQQQQQQSMS
GSQEKDLPMMLNSVEPPSMLQPQPKSHARSQPQTRPSSNSLNNGGTLSGHDHNIRASSSW
VVEKPKEVPQAKTKRTMSRGPSEDTTDTAVIQESVEMRKMKTSATSVIPVPGSGLENQGK
AASMPRLNAELQRSRSRHSPGIHLASVPDASPMKRSASTVTPQRTQEVNLRDYTLDKPSQ
DRPHHHHHHHRCHHRRDRDRDKDRDRDREKRQRSLDTPLGEQPHSSSGAPGEPESDLAAS
RERAHDRGRSHYRKHHSSVDKQRYYSCDRYCSREHCHTKPATTSCVASPSEGQESSNKQG
SGWVKGSPVALSSSSSTPSHGRRQLPQTPLTPRPGVAYKTANSSPLHFISSQASLSPGRL
SRGLSEHNALQHSGSHHLPCPVSRISSEPFLGQSHSEALGSLYGSLTDQLDIYQDATSLS
PSTRAGRLSRTALPRMMGALLPAPQQNLVVPNGYHFSSGGSTSLGSGIRAPRYYQEAEED
EWC
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaatgtatggccttggaccccagaactacttccactcctcattcaactgt
tttgattttggggttattattggcagtatttttgaggtgatctgggctgccatcaaaccc
ggggcctcatttgggatcagtgtcctgcgggctcttagactgctcaggatcttcaaagtc
accaagtactggaactctttgaggaacctggttgtatcccttctcaattccatgaagtct
atcatcagcctcttgttcctcctcttcctcttcatcgtggtttttgctctgctgggcatg
cagctgtttggtggccagtttaattttgaagatgaaacaccaacaaccaactttgacaca
ttccccgcagcgatcctcactgtctttcagatcctaactggggaggactggaatgccgtc
atgtaccatgggatcgaatcacaggggggcgtgcacgggggaatgttctcctccatttat
ttcatcgttctcactctctttggaaactacacactcctcaacgttttcttggccattgct
gttgataaccttgcaaatgcccaggagctcactaaggatgaagaggagcaagaggaggcc
attaataagaagcttgcgctccagaaggccaaggaggtaaaggaggtcagccccatgtca
gccgctaacatttccatcacagcttttctaacacgcagtcgaggtaacgcgcactctagc
aactcatccatctgcagcgttaactcactgagttatgtctgcactccagttcatcactac
ttgagtaaggagcagcaaaagtcaatgaagacaatgtcagtgtgggagcagagggccaat
cagctgaggaggcagaaccaggcgagctgcgaggccctctacagtgagctggagcttgag
gagcatctccgcctgtcctcggctctccacatccggccagacatgaaaacccaccttgac
cggccgcttgttgttgagcctcatgacgggccttttttggccagccaccagcatcaccat
cataagccctgtatgccagaggaggcagatactgccgacgaccctccccctcctgtgcct
caccatccccgccgccaccaccgccatagagataggtatcgggccagaacgagagaggag
atgaatgataacggtggcactagtaagggcgaaggccaccatgtccaccatagcagctcc
aaagaccacaatggcagccggggcaaagatgggaggtgcgaaaggtcccacagccgagaa
agaggcaggagacatcaccatcagagctcaatggatgacagcggaggtggaggagtcatg
tgtgagagagagcattggcatcatcattcacaccggcagtctcgagggggcattgggact
gtgaacagtggagggaggggagcactaagatactgccacaaagatggacattcatctaac
agggatggggaaaggaatcccagaggagacagtggggccaatggagagaggaggagacaa
cggagtcatggatccagggaccaagccacagttaaaggagaggagtccaatgagagagag
aagacccacagccatggggacaggttttgtgacccagggggggattcccttgccatctcc
cccctgcagggctctggggggagcatctggcctcctgaccaaccagaggactcagacaac
cagaggaatgtcagaagaacaggccaaacctccatccaaattcctcctgtgaccatcacc
tccccacctggagagaccaccctcatacaaatgaacagcatagactgtgagacaatgcca
atgaatgagaagagccttggggatcttggtcaaagtggtcccaaacccatcctgccttac
agttccatgttcatctttggacagaccaatccggtgaggcggttatgtcactatattgtg
agtctgcgatactttgagatgtccatcctggttgtcattgctatgagcagtattgcctta
gcagcagaggatcctgtctggacgaacgcccctcgcaacaatgtgctgaaatatctagac
tatgccttcactggtgttttcacttttgaaatggtgattaagatggtggaccttggcctg
ttgctccatcctggatcctacttcagagacctgtggaacattctggacttcatagtggtc
agtggagcactggtggcttttgcattttcgagcttcatgggggggaccaaaggcaaagac
atcagcactatcaagtcactgagagttctgcgagtgctcaggcctctcaagaccatcaaa
cgtctgccaaaactcaaggcggtgttcgactgtgtggtcaattctttgaagaacgtgctg
aacatcctaattgtttacatccttttcatgttcatctttgctgtaatcgcagttcagctt
ttcaaggggaaattcttctattgtacagacgagtccaagggcctggagaaggactgcaaa
ggacagtttctagactatgataaagacgaggtggctgccatgcccagagaatggaagaaa
tatgagtttcattatgacaatgtgctgtgggccttcttgaccctcttcactgtctccact
ggggagggctggccaactgtcttgaagcactctgtggatgctacttttgaagacacaggt
cccagtccaggctaccggatagaaatgtccatcttctatgtggtttactttgtggtcttc
cctttcttttttgtcaacatctttgttgctctgatcatcatcaccttccaggagcaggga
gacaaggccttgtctgaatgcagcttagaaaagaatgagcgggcttgtattgactttgcc
ataaacgccaaacctctgacacgctacatgcccgagaacacgcactccttccagtacagg
atgtggaagtttgtggtctcagctccgtttgagtactccatcatgatcatgatcgctctt
aatactgtggtactcatgatgaagttccacggagcgccagacttttatgaagcgatgctg
aagaacctcaacatagtcttcaccactctcttttctctggagtgtatcctcaagatcatt
gcttttggtccattgaactacttaaaggatgcctggaacgtgtttgactttgtcacagtg
ttgggcagcatcactgacatcctagtgaccgaaatcaatactacggacaggctgctgaac
ctgagcttcctgaggctgttcagagctgctcggctcatcaagctgctaagacagggctac
accatccgcatcctgctgtggacctttgtccagtccttcaaggccctgccttatgtttgc
ctactgattgctatgctgttcttcatttatgcaattattgggatgcaggtgtttggcaac
attgagctgaatgaggacacagcgatcaatcaccacaacaactttcgcacttttctccaa
gctctcatgctgcttttcaggagtgcaactggcgaggcctggcatgagatcatgttatcg
tgtttgagtcatcgagcctgtgacgagcgatcagggtcccatgggaaagaatgcggcagt
gatttcgcctacttctactttgtctcctttatcttcctctgctccttcctgatgctgaac
ctgttcgtagcagtcataatggataactttgagtacctgaccagagactcctccatcctg
gggcctcatcacctcgatgagttcatccgggtttgggccgagtacgacccagctgcatgt
ggccgtatcaagtacctcgatatgtatcagatgctgctccacatgtccccacccttaggt
ttgggaaagaaatgtccgccaagagtcgcccacaagcgcctcgtcaaaatgaacatgccc
atcgctgatgacaacagtgtccatttcacctccactctgatggccctaattcgcacagct
ctggagatcaaactggcctcaggcatggtagcccagcggctgtgtgatgctgagttaaag
aaggagttgtctacagtgtggcccagcctgtctcaaaagaccatggatctattggtgaca
ccacataagcctaatgaactgacagtagggaaggtttatgcagccctgatgatcttcgac
tactataagcagaatcgagcaagaaggctgcagcagcagcagcagcaacagagcatgtca
ggctcccaggagaaagatctgcctatgatgttaaacagtgtggagcctcccagcatgctt
cagccacagcccaaatcccatgccaggtcccagccacagaccagacctagctccaactcc
ctcaacaatggaggcacgctgtcaggacatgaccacaacatcagagcatcatcctcatgg
gtggtggagaaacccaaggaagtgccccaagctaaaactaagagaaccatgtccaggggc
ccatcagaggacaccacggacactgccgtcattcaggagtcagtggagatgaggaaaatg
aagaccagtgccactagtgtaattccagtacctggctcaggtcttgagaaccagggcaaa
gctgcttctatgccgcgactcaatgctgagctgcagcggagccgctcacgccactctcca
gggatccatctagcttctgtccctgatgccagccctatgaagcgctcagcctccactgtc
accccacagcgaacccaggaggtcaaccttagggactacaccttagacaaacccagccag
gaccgaccccaccaccatcaccaccaccaccgctgccaccatcgtagagacagggataga
gataaagacagagacagagatagagagaagaggcagaggtctttggatacacctctgggt
gaacaaccacacagctcttctggcgcaccaggagagccagagtctgacctagctgcctcc
agagagcgggcccacgaccgtggacgctcccactacaggaaacaccactcatctgtggac
aagcagcgctactactcctgtgaccgctactgcagccgggaacactgccacaccaaacct
gccaccaccagctgtgttgcctcccccagcgaggggcaggaaagcagcaacaagcagggc
agtggttgggttaaaggcagcccagtggcactgagctccagttcgagcacgccaagccac
ggacgtcggcagctcccccagacccccctcaccccacggcccggggtagcctacaagact
gccaattcatcccctttgcacttcatttccagccaggcctctctaagtcctggtcggctg
agccgtggcctgtcggagcacaacgccctccagcatagtggctcccaccaccttccctgc
cccgtcagtcgtatcagttccgagcccttcctgggccagagccacagcgaggccctgggc
agcctctatggcagcctcacggaccagctggacatctatcaggatgcgacatcactgtcg
cccagtacccgtgccggacgcttatctcggaccgcactgcctcgcatgatgggagccctg
cttcctgctccgcagcagaaccttgtggtgcccaacgggtaccacttcagctctgggggt
agcaccagcctaggctctggcatcagggcacccaggtattaccaggaggcagaggaggat
gaatggtgctag
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