Epinephelus lanceolatus (giant grouper): 117252472
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Entry
117252472 CDS
T07331
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04142
Lysosome
ely04144
Endocytosis
ely05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117252472 (cltcl1)
04142 Lysosome
117252472 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117252472 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117252472 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117252472 (cltcl1)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117252472 (cltcl1)
Exosome [BR:
ely04147
]
Exosomal proteins
Proteins found in most exosomes
117252472 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
117252472
NCBI-ProteinID:
XP_033475273
LinkDB
All DBs
Position
4:complement(15059006..15095261)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTV
ALVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEEIFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAAITMM
SHPTDAWKEGPFKDIIAKVANVELYYKSLSFYLDYKPLLLNDLLTILSPRLDHSRAVNFF
SKVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEADSKRKTEEEVTEPQPIVFGQQLMLPPSPAPVAPQQAYPGYGYPTAPAGFPAAPA
YGFNM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggcgtg
aacccagccaacattgggttcagctatctgaccatggagtcagacaagttcatctgcatc
agagagaaggtgggcgagcagaatcaggtggtgatagtggacatgtctgaccccaccaac
ccgatcaggagaccgatctctgctgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagacgctgccaagacactgcagatcttcaacattgagatgaagagtaaggtg
aaggctcacactatgacagaagaggtcatgttctggaaatggatatcggtaaacactgtc
gcgttggtgacggatacggccgtctatcactggagcatggagggggattcccaacccacc
aaagtattcgatcggcacgccagtctggcgggatgtcaaatcattaattatagaactgat
gaacaacagaagtggctgctgctgatagggatttctgcacagcaaaaccgtgtagtcggg
gcgatgcagctgtattctgttgacaggaaagtgtcccagcccatcgagggccacgccgct
gccttcggggagttcaaagtggagggaaatgccaaaccgtccaccctcttctgctttgct
gtgcgctcacaggcagggggaaagttacacatcattgaagttggtcagccagctgcagga
aaccagccttttgctaagaaagcagtggatgtgttcttccctccagaggcccagacagac
tttcctgtagctatgcagattggtagtaagcacggtgtaatatatttgatcacaaagtat
ggttacattcacctgtatgacctggagtctggagtgtgcatctacatgaaccgaattagt
gcagagaccatctttgtaaccgccccgcatgaagccacctcaggaattattggggtcaac
aagaagggacaggtgttgtcagtgtgtgtcgaggaggaaaacattgtcaactacgccacc
aatgtcctgcagaaccctgatcttgccctgaggatggccgtgcggtcaaaccttgccggg
gctgaggagatttttgccaggaagttcaacactctatttgcccagggaagttattcagag
gctgcaaaggttgctgcatcagcacccaagggcatcctgcggacagcagagaccatccga
aagtttcagagtgtcccggcccagccaggtcaggcctctccactgttgcagtactttggt
attctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtc
ctgcagcagggccgcaagcaactactggagaaatggctgaaggaggacaagctggagtgc
tcagaggagctgggggacctggtgaaggcctctgaccccaccctcgctctcagtgtgtac
ctcagggctaacgtccccaacaaggtcatccagtgcttcgctgagactggtcagttccag
aagatagtgctgtatgctaaaaaggtgggctacaccccagactgggtgtttttgctgaga
aatgtgatgcgcgtcaatccagaccagggactgcagtttgcccagatgctggttcaggat
gaggagccactggccaacatcaaccagattgtagatgtgttcatggaaggcaacctgatc
cagcagtgcacctctttcctgttagatgctctaaagaacaaccgccccgccgaagggcat
ttacagactcgtctgcttgagatgaacctcatacatgcccctcaggtagcagatgcaatc
ctggggaatcagatgttcacacactatgaccgtgcccatgttgctcagctgtgcgagaag
gcaggtctgctgcagcgggctcttgaacactacaccgacctgtatgacatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtgaacttctttggctctttatca
gtagaggactcgttggagtgtttaagggccatgttgtcagctaatatcaggcagaacctg
cagctgtgtgtccaggtagcatccaagtatcatgagcagctggggactcaggcgttagtg
gagctctttgaatccttcaagagttatgagggcttgttttacttcctcgggtcgattgtg
aatttcagccaggagcctgacgttcacttcaagtacatccaggctgcctgcaaaacaggc
cagatcaaagaagtggagagaatctgcagagagagcaactgctatgacccggagagggtt
aaaaacttccttaaggaggccaagctaacagaccagcttcctcttatcattgtgtgtgat
cgctttgacttcgtccatgacctggtcctctacctctaccgcaacaatctacagaaatac
attgaaatctacgtacagaaagtgaaccccagtcgtttaccggtggtgataggtggactg
ttggatgtcgactgctccgaggatgtcattaagaacctgatcatggtggtcagagggcag
ttttccactgatgagctggtggaggaggtggagaagaggaacaggttaaaacttctgttg
ccatggctggagtcccgtatccatgaaggatgcgaggagccggcaacccacaatgccctg
gccaaaatctacattgacagcaacaacacgcccgagcgcttcctgaaggagaacccattc
tatgacagcgctgtggtcggaaaatactgcgagaagagagatccccacctggcctgtgtt
gcttatgagagaggacagtgtgacctggatctcatcaaagtgtgcaatgagaactcgtta
tttaagagtgaggctcgatatctggtgcggcggaaagatccagagctttgggcaaatgtg
ttggaagagaacaaccccttcagaagacaactcatcgaccaggtggtgcagacagcactg
tcagagacccaggacccggaagaggtgtcagtcactgtcaaggccttcatgactgcagac
ctgcccaatgagctcatagagctgctggagaagatcgtactggataactctgtcttcagt
gagcacagaaatctccagaacctgctgattttgacagccatcaaggcggaccgcactcgt
gtgatggagtacatcaacaggctagacaactacgatgctccagacatcgctaatatagcc
atcagcaatgagctctttgaagaagcgtttgccattttcaaaaagtttgatgtcaacacc
tcagccatacaggtattgatagagcacatagggaacttagatcgtgcctatgagtttgct
gagcgctgtaatgagcctgcggtgtggagccagttagccagagctcagctacaaagggac
ctggtcaaggaggccatcgactcgtatatcaaagccgtcgacccttcagcgtacatggag
gtggtcaacgcagccagcaaaaacaataactgggaagacttggtaaaattcctccagatg
gctcgaaagaaagcgagagagtcatatgtggagacagagctgatctttgctttagctaaa
acgaaccgtctggctgagctggaagagttcgtcagtgggcccaacaatgctcacatacag
caggtgggcgatagatgttatgatgagggtatgtatgaagcagccaagctcctgtacaac
aatgtgtccaactttgctcgtctcgcatcgacgctcgtccacctgggagagtaccaggca
gctgtggacagcgccaggaaagccaacagcacacggacatggaaggaggtgtgttttgcg
tgtgtggatggcgaagagttccgtctggcacaaatctgcggccttcacattgtgatccac
gctgatgagctggaggacctgatcagctactatcaggaccgcgggtactttgaggaactc
atcgctctgttggaggctgcgctgggtctggagcgggcacacatgggcatgttcaccgag
ctcgccatcctctactcaaagttcaaacctcagaagatgagggagcacctggagctcttc
tggtccagagtcaacatcccaaaggtgctgcgagcagcagagcagtctcatctatgggca
gagctggttttcctttacgataaatatgaggagtacgacaacgctgctatcacgatgatg
tctcatccaacagatgcgtggaaagaagggccgttcaaggacattattgcgaaggttgcc
aatgtggagctgtactataaatctctttccttctacctggattacaaacccctcttactg
aatgacctgctgaccattctgtctccgcggctggaccacagccgggctgtcaactttttc
agcaaggttaatcagctgaagttggtcaagccttacctgaggtctgtccagaatcacaac
aacaagtccgtcaacgaagccctcaacaacctgctgacagaggaggaagactaccagggc
ctgagagcgtccatcgatgcctatgacaactttgataccattggcctggcgcagaggtta
gagaaacacgaactgattgagttcagacgtatcgctgcttacctgtacaagggcaacaac
cgctggagacagagtgtagagctctgcaagaaggacaaactctacaaggatgccatgctg
tacgctgcagagtctaaggacgcagagctggcagagactttgctccagtggttcctggag
gagggcaggaaggagtgcttcgcggcctgcctgtttgcctcctacgacctgctgcaccct
gacgtggtgctggagctggcctggagacacaacatcatggacttcgccatgccgtacttc
atccaggtcatgagggagtacctgacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactggaggaggcagacagcaaaaggaaaactgaagaggaggtgacagagcctcag
ccgatagtgtttggccagcagctgatgttacccccctctcctgctccagtggctccacag
caagcgtacccaggctacggctaccccaccgctcctgcgggcttccctgctgcgcctgct
tatggcttcaacatgtag
DBGET
integrated database retrieval system
