Epinephelus lanceolatus (giant grouper): 117252472
Help
Entry
117252472 CDS
T07331
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04142
Lysosome biogenesis
ely04144
Endocytosis
ely05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117252472 (cltcl1)
04142 Lysosome biogenesis
117252472 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117252472 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117252472 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ely04147
]
117252472 (cltcl1)
Membrane trafficking [BR:
ely04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117252472 (cltcl1)
Exosome [BR:
ely04147
]
Exosomal proteins
Proteins found in most exosomes
117252472 (cltcl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
117252472
NCBI-ProteinID:
XP_033475274
LinkDB
All DBs
Position
9:complement(15427948..15464307)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTVA
LVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EEIFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAAITMMS
HPTDAWKEGPFKDIIAKVANVELYYKSLSFYLDYKPLLLNDLLTILSPRLDHSRAVNFFS
KVNQLKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTVD
KLEEADSKRKTEEEVTEPQPIVFGQQLMLPPSPAPVAPQQAYPGYGYPTAPAGFPAAPAY
GFNM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggcgtg
aacccagccaacattgggttcagctatctgaccatggagtcagacaagttcatctgcatc
agagagaaggtgggcgagcagaatcaggtggtgatagtggacatgtctgaccccaccaac
ccgatcaggagaccgatctctgccgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagctgccaagacactgcagatcttcaacattgagatgaagagtaaggtgaag
gctcacactatgacagaagaggtcatgttctggaaatggatatcggtaaacactgtcgcg
ttggtgacggatacggccgtctatcactggagcatggagggggattcccaacccaccaaa
gtattcgatcggcacgccagtctggcgggatgtcaaatcattaactatagaactgatgaa
caacagaagtggctgctgctgatagggatttctgcacagcaaaaccgtgtagtcggggcg
atgcagctgtattctgttgacaggaaagtgtcccagcccatcgagggccacgccgctgcc
ttcggggagttcaaagtggagggaaatgccaaaccgtccaccctcttctgctttgctgtg
cgctcacaggcagggggaaagttacacatcattgaagttggtcagccagctgcaggaaac
cagccttttgctaagaaagcagtggatgtgttcttccctccagaggcccagacagacttt
cctgtagctatgcagattggtagtaagcacggtgtaatatatttgatcacaaagtatggt
tacattcacctgtatgacctggagtctggagtgtgcatctacatgaaccgaattagtgca
gagaccatctttgtaaccgccccgcatgaagccacctcaggaattattggggtcaacaag
aagggacaggtgttgtcagtgtgtgtcgaggaggaaaacattgtcaactacgccaccaat
gtcctgcagaaccctgatcttgccctgaggatggccgtgcggtcaaaccttgccggggct
gaggagatttttgccaggaagttcaacactctatttgcccagggaagttattcagaggct
gcaaaggttgctgcatcagcacccaagggcatcctgcggacagcagagaccatccgaaag
tttcagagtgtcccggcccagccaggtcaggcctctccactgttgcagtactttggtatt
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcccgtcctg
cagcagggccgcaagcaactactggagaaatggctgaaggaggacaagctggagtgctca
gaggagctgggggacctggtgaaggcctctgaccccaccctcgctctcagtgtgtacctc
agggctaacgtccccaacaaggtcatccagtgcttcgctgagactggtcagttccagaag
atagtgctgtatgctaaaaaggtgggctacaccccagactgggtgtttttgctgagaaat
gtgatgcgcgtcaatccagaccagggactgcagtttgcccagatgctggttcaggatgag
gagccactggccaacatcaaccagattgtagatgtgttcatggaaggcaacctgatccag
cagtgcacctctttcctgttagatgctctaaagaacaaccgccccgccgaagggcattta
cagactcgtctgcttgagatgaacctcatacatgcccctcaggtagcagatgcaatcctg
gggaatcagatgttcacacactatgaccgtgcccatgttgctcagctgtgcgagaaggca
ggtctgctgcagcgggctcttgaacactacaccgacctgtatgacatcaaacgagccgtg
gtgcacacacatctgctcaaccctgagtggctggtgaacttctttggctctttatcagta
gaggactcgttggagtgtttaagggccatgttgtcagctaatatcaggcagaacctgcag
ctgtgtgtccaggtagcatccaagtatcatgagcagctggggactcaggcgttagtggag
ctctttgaatccttcaagagttatgagggcttgttttacttcctcgggtcgattgtgaat
ttcagccaggagcctgacgttcacttcaagtacatccaggctgcctgcaaaacaggccag
atcaaagaagtggagagaatctgcagagagagcaactgctatgacccggagagggttaaa
aacttcctgaaggaggccaagctaacagaccagcttcctcttatcattgtgtgtgatcgc
tttgacttcgtccatgacctggtcctctacctctaccgcaacaatctacagaaatacatt
gaaatctacgtacagaaagtgaaccccagtcgtttaccggtggtgataggtggactgttg
gatgtcgactgctccgaggatgtcattaagaacctgatcatggtggtcagagggcagttt
tccactgatgagctggtggaggaggtggagaagaggaacaggttaaaacttctgttgcca
tggctggagtcccgtatccatgaaggatgcgaggagccggcaacccacaatgccctggcc
aaaatctacattgacagcaacaacacgcccgagcgcttcctgaaggagaacccattctat
gacagcgctgtggtcggaaaatactgcgagaagagagatccccacctggcctgtgttgct
tatgagagaggacagtgtgacctggatctcatcaaagtgtgcaatgagaactcgttattt
aagagtgaggctcgatatctggtgcggcggaaagatccagagctttgggcaaatgtgttg
gaagagaacaaccccttcagaagacaactcatcgaccaggtggtgcagacagcactgtca
gagacccaggacccggaagaggtgtcagtcacagtcaaggccttcatgactgcagacctg
cccaatgagctcatagagctgctggagaagatcgtactggataactctgtcttcagtgag
cacagaaatctccagaacctgctgattttgacagccatcaaggcggaccgcactcgtgtg
atggagtacatcaacaggctagacaactacgatgctccagacatcgctaatatagccatc
agcaatgagctctttgaagaagcgtttgccattttcaaaaagtttgatgtcaacacctca
gccatacaggtattgatagagcacatagggaacttagatcgtgcctatgagtttgctgag
cgctgtaatgagcctgcggtgtggagccagttagccagagctcagctacaaagggacctg
gtcaaggaggccatcgactcgtatatcaaagccgtcgacccttcagcgtacatggaggtg
gtcaacgcagccagcaaaaacaataactgggaagacttggtaaaattcctccagatggct
cgaaagaaagcgagagagtcatatgtggagacagagctgatctttgctttagctaaaacg
aaccgtctggctgagctggaagagttcgtcagtgggcccaacaatgctcacatacagcag
gtgggcgatagatgttatgatgagggtatgtatgaagcagccaagctcctgtacaacaat
gtgtccaactttgctcgtctcgcatcgacgctcgtccacctgggagagtaccaggcagct
gtggacagcgccaggaaagccaacagcacacggacatggaaggaggtgtgttttgcgtgt
gtggatggcgaagagttccgtctggcacaaatctgcggccttcacattgtgatccacgct
gacgagctggaggacctgatcagctactatcaggaccgcgggtactttgaggaactcatc
gctctgttggaggctgcgctgggtctggagcgggcacacatgggcatgttcaccgagctc
gccatcctctactcaaagttcaaacctcagaagatgagggagcacctggagctcttctgg
tccagagtcaacatcccaaaggtgctgcgagcagcagagcagtctcatctatgggcagag
ctggttttcctttacgataaatatgaggagtacgacaacgctgctatcacgatgatgtct
catccaacagatgcgtggaaagaagggccgttcaaggacattattgcgaaggttgccaat
gtggagctgtactataaatctctttccttctacctggattacaaacccctcttactgaat
gacctgctgaccattctgtctccgcggctggaccacagccgggctgtcaactttttcagc
aaggtgaatcagctgaagttggtcaagccttacctgaggtctgtccagaatcacaacaac
aagtccgtcaacgaagccctcaacaacctgctgacagaggaggaagactaccagggcctg
agagcgtccatcgatgcctatgacaactttgataccattggcctggcgcagaggttagag
aaacacgaactgattgagttcagacgtatcgctgcttacctgtacaagggcaacaaccgc
tggagacagagtgtagagctctgcaagaaggacaaactctacaaggatgccatgctgtac
gctgcagagtctaaggacgcagagctggcagagactttgctccagtggttcctggaggag
ggcaggaaggagtgcttcgcggcctgcctgtttgcctcctacgacctgctgcaccctgac
gtggtgctggagctggcctggagacacaacatcatggacttcgccatgccgtacttcatc
caggtcatgagggagtacctgacaaaggttgatgagtttgcagcgaaggtgacggtggac
aaactggaggaggcagacagcaaaaggaaaactgaagaggaggtgacagagcctcagccg
atagtgtttggccagcagctgatgttacccccctctcctgctccagtggctccacagcaa
gcgtacccaggctacggctaccccaccgctcctgcgggcttccctgctgcgcctgcttat
ggcttcaacatgtag
DBGET
integrated database retrieval system
