Epinephelus lanceolatus (giant grouper): 117252577
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Entry
117252577 CDS
T07331
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ely03000
]
117252577 (snapc4)
03021 Transcription machinery [BR:
ely03021
]
117252577 (snapc4)
Transcription factors [BR:
ely03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
117252577 (snapc4)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
117252577 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
117252577
NCBI-ProteinID:
XP_033475496
LinkDB
All DBs
Position
4:complement(6483423..6512692)
Genome browser
AA seq
1790 aa
AA seq
DB search
MSVSLSAERDRIQRQVEELEQILSATNTEQELLSSETGDESDDDDSQEEGRQSAAGLLAQ
REKIQKEIQNLENVLGPQSPTCLSDDDDDDVSSSSEESELGLSMSAESCLQMNLVYQQVV
QETLDQLETLLTHNHKLQKELLSQLSGPIKESSSEQPAPSSFQQPIGMYLGRFLKPYFKD
KLTGLGPPANQETKEKASRLTGCLDDKKLKMKRSEGHSGSSLQFTPDRLTHSALCLCVSV
CLSVSVCLCVCLCVCVSVCVCVCVCVCVSLCVSLRVDYLSQKLSSAAETDRQQLRQQMDS
LEREIDLIRAKKEEELLGDRYDEHDWQKISNIDFEGTRDAEDIRSFWQNYLHPSINKTAW
SKEEVHQLKEVSRRHVERNWETIAAELGTGRTAFLCLQTFQRFASDSLKRSSWTPDEDNL
LKELVDKLRIGNFIPYTQMSYFMEGRDPAQLIYRWNQVLDPSLRKGTWTKEEDELLLQAV
SHHGEKNWWKIRLEVPGRTDSSCRDRYYDCLKAGTKRGAFDQQEVELLLRLVDKHGVGRW
AKIAAEIPNRYDAQCLREWRKLSRSAAAPVQKNKKKKKTSKSSGVQPKKKTKIRTKAAGT
AKRSIRSRLMTLKEEEEEEEEEESSEDEGMVVEYMDSDEEEKKKKKKKKEVVKAEKEYTF
PPMQEWIPVEKAQAPFTFLSFRPVELPSSGVTHSRVRSTIVGQFGRSVIIGPAPRELQWG
ERHSSSTMMMVSPDQLRAHLRSQEHKFKTRSSGPRGRARTNDQNPLGRVTDKGIYYQLQA
AVTPWIGNLLIPPKHRQTEADVLRERAEKTKLCSTPVFLLLLQTLNVDVVGCKEMIEQRR
NKVVSLAPPQCPRSVRPNTVAGILQQKRAIKEELREFNQQHKLILKQLQELQQKQKQQLL
GQQQPHLPHPHPPPCPTTPSQSCPRILLQMPPNMHPLMSPMSFPQAVFIPHPVTQPRAPS
VQSPSALNTSPLAPPKPPPVGVDSSPSPPHPAPHSVIPVSVVSKPLNTTSTSSASLQQEA
PPSTQNLIIASPASSNQHVTVVSTPPSHHAPPSTSSSPVTCISKPHPAPHHRVTSSSPKG
RGQKVAVCSSQSGGDLGWAGEGVGGVSDSMIKEGRRVRTPSQKAKALQEATEAKAEAKKK
AASSPRKRAQIQTIAPAPPQTLVPPHTVLAAPHTVVAAPPQQVCTVPIQPVRQTPPSSLT
SPPIAPQRPPPARVISCPLTKATPPSAPPPVAVSPSSSPLNATPAGSDRTVSSTQNPSLA
LPPSIQTNQHTASSWSSPTAPLPNDHDYTCFNLPSSHDGSNSIQLTPDSSPNTRPKAPPS
RRKRGRREEQPSVTSSQEDKGVGGTGTGVIQEGRRIRTQTPKARAFQEAKAEANKKRTSS
SSPRKKRCRKSRPKEEVVAQSQPMTPLPGICLLTDQSMWVMTPGGLVKLAASPPGTQQVC
VSSAPLPALPRNNLNHQLTTTPQITNGSLRSIAPHPPNPEPVPVGLPVLNQLSPFPAPPT
CVSKPLPPGFILQPLSDPDSSPQPPLKVLLPYKGTVRADPAAPPPLRREPLQFDPSLMFL
ESQKVVRDWLSGRGGVVVPGAGVALPYLPPFISSLCTLSALLRAKDSLTKSSLQLLSQGS
EPRRSTTTPIPDDSTEMTSSPPPDLPDSTSDLRPAQDSEAPSVNSDLPQEDEEELVAVVR
QLVAERFSGNPAYQLLKARFLSCFTIPALLATMQPIRERNMSCPANEEEEEKEDEEDDEE
VTELKKMKETGRRRRAERSVLLCDGSGAPANHFSGIITSTPGPDRTGSDQ
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtctctgtccgcagagagggacaggatccagagacaggtggaggagctggaa
cagattctgtctgcaacaaacactgaacaggaactgctgagcagtgagacaggtgatgaa
tcagatgatgatgactcacaggaagaggggagacagtctgcagcaggtctgttggctcag
agagagaagatccagaaggagatccagaacttggagaacgtccttggaccacagagtcct
acctgtctgtcagatgatgatgatgatgatgtcagcagcagcagtgaggagagtgagctg
ggtctgtctatgtcagcagaatcatgtctacagatgaacctggtctaccagcaggtcgtt
caagagacactggaccagctggagacactactgacacacaaccacaaactgcagaaggag
cttctgtctcagctgtctggaccaatcaaagagtcttctagtgaacagcccgccccctcc
tccttccagcagccaatcggcatgtacctgggccgcttcctcaaaccgtacttcaaggac
aaactgacaggactgggtcctccagccaatcaggagacgaaggagaaggccagcaggttg
accggctgtctggacgacaagaagctgaaaatgaaacgatctgagggacattcagggtcc
tcacttcaattcacacctgacagactaacacactctgcactttgtctctgtgtgtctgtg
tgtctctctgtgtctgtgtgtctgtgtgtgtgtctgtgtgtctgtgtgtctgtgtgtgtg
tgtgtgtgtgtgtgtgtctgtgtgtctctgtgtgtgtctctcagggtggactacctgagt
cagaagttgtcctcagcagcagagacggacagacagcagctcagacagcagatggacagt
ttggagagagagattgacctgatcagagcgaagaaggaggaggagctccttggtgatcga
tatgatgaacatgattggcagaaaatctccaatattgattttgagggcacgagggatgct
gaggacatccgtagtttctggcagaactacctccacccgtccatcaacaagactgcgtgg
agtaaggaggaggtgcaccagctgaaggaggtcagcaggagacatgtggagagaaactgg
gagaccatcgctgcagaactggggacggggaggacggccttcctgtgtcttcagacattc
cagcgttttgcctcggactcattaaaacgaagtagctggactcctgatgaagacaatctg
ctcaaagagctcgtggacaagttgaggatcggaaacttcatcccctacacacagatgagt
tacttcatggagggtcgggacccagctcagctgatctacagatggaaccaggttttggac
ccgagcctgaggaaaggcacatggaccaaagaggaggatgagctgctgctccaggccgtg
tctcaccatggagagaagaactggtggaagatccgcctggaggttcctggacgcaccgac
tccagctgcagagacaggtattatgactgcctgaaggcggggacaaagagaggagcgttt
gaccaacaggaggtagagctgctactgcggctggtggacaaacatggagttggtcgctgg
gcgaagattgctgcagagattcctaatcggtacgacgctcagtgtctgagagagtggagg
aaactgagcagatcagcagctgcccctgttcagaaaaacaaaaaaaagaagaaaacttca
aagagtagtggagtacagccaaagaagaagacgaagataaggacgaaggcagctggcacc
gctaaaaggagtatcaggagtcggctgatgacgctgaaggaggaggaggaagaggaggaa
gaggaggagagcagtgaagacgaggggatggtggtggagtacatggacagtgatgaagag
gagaaaaagaaaaagaagaagaagaaggaggtggtgaaggcagagaaggagtacaccttt
cctcccatgcaggagtggattccagtagaaaaagcacaagcacctttcaccttcctgagc
tttcgaccagtggagttaccttcctctggagttacccacagtcgtgtgcggtcgaccatc
gtgggccagtttggacgctccgtgatcatcggaccagctcccagagagctgcagtggggg
gaacgccacagcagcagcaccatgatgatggtgtcacctgaccagctccgagcccacctg
cgctcccaggagcacaaattcaaaacccggagctccggcccccgagggagggccaggacc
aatgaccagaacccactgggccgagtgacggacaaggggatctactaccagctgcaggcc
gccgtgacaccgtggatcggcaacctgctgatcccaccaaaacacaggcagacggaagcc
gatgtcctgagggagcgagcagagaagaccaagctctgctcgactcctgtcttcctgctc
ctcctccagaccttgaacgtggatgtcgttggctgtaaggagatgatagagcagaggagg
aacaaggtggtgtcactggctccgcctcagtgccctcgctccgttcgtccgaacaccgtc
gcaggaatcctacagcagaagagagccataaaggaggagctgcgggagttcaaccagcag
cacaaactgatcctgaagcagcttcaggagctgcagcagaaacagaaacaacagctgctc
ggacagcagcaaccccaccttcctcatccccatcctcctccttgcccaaccacgccctct
cagagttgtccccgcattctccttcagatgcctcctaacatgcatcctttgatgtctccc
atgtcatttcctcaggccgtcttcatccctcatcctgtcacgcagcctcgcgctccctct
gtccagtctccctctgccctgaacacatcccccttagctccacccaaacctcctcctgtg
ggggtcgactcctctccgtcacctccacatcctgctcctcacagtgtcattccagtctct
gtggtctcaaagcccctgaacaccacatctacttcatctgcctctctccaacaagaagct
ccaccttccacccaaaacctgatcattgcctcgcccgcatcctctaaccaacatgttact
gttgtttctacaccgcccagtcatcacgcccctccctccacctccagcagccccgtcacc
tgcatcagcaagcctcatcctgcccctcatcatcgcgtcacctcgagttcacccaaaggg
aggggccaaaaggtggctgtctgcagcagtcagagtgggggagatttgggctgggcaggt
gaaggtgtgggtggggtgagtgacagtatgattaaagaaggaaggagggttaggacgccg
agtcagaaggccaaagctctgcaggaagccaccgaggccaaggctgaagccaagaagaaa
gctgcttcatctccacgaaagagagctcagatccagaccatcgctcctgctcctcctcag
accttggtccctcctcacactgttcttgctgctcctcacactgttgtcgctgctcctcct
cagcaggtctgcactgttcccatccagcccgtacgtcagactcctccctcctccctgacc
agtcctccaatagctcctcaaagacctcctcctgccagggtcatttcctgtcctctgacc
aaagctacacctccttctgctcctcctcctgtagctgtgagcccgtcctcatcgccctta
aacgccacacctgccggctctgacaggactgtgtcctcaactcaaaaccccagtttagcc
ctgcccccctccatacagaccaatcagcacactgcttcctcctggtcaagcccaacggct
cctctccccaacgatcatgactacacctgttttaatctcccctccagtcatgatggctca
aactcaattcagctgacccctgactcctcccccaacacgcgtcccaaagccccacccagt
cggaggaaacgagggaggagggaggagcagccgagtgtgacgagcagtcaggaagacaaa
ggtgtgggtgggacaggtacaggtgtgatccaggaaggaaggaggattcggacccagact
ccgaaggccagagcttttcaggaggcaaaggctgaagccaataagaagagaacttcttct
tcttctcctcgtaagaagcgttgtcgtaagtcccgccctaaagaggaagttgtcgcacag
agccagccaatgactccgcttcctgggatctgtttacttactgatcaatccatgtgggtc
atgactcctggtgggctggtcaagttggcagcctcgccccccggcacacagcaggtgtgc
gtatcaagcgctcccctcccagctctacccaggaataatttaaaccatcagctgaccaca
acccctcaaatcaccaacggcagcctgcgatcaatcgcacctcacccccctaaccctgag
cctgtccctgtaggcctccccgttctgaatcaactgagcccttttcctgccccacccacc
tgtgtctctaaacccctccccccaggcttcatcctgcagcccctctcagaccctgactcc
tccccccagcctcctctgaaagtcctcttgccatataagggcacagtcagagcggacccg
gcagcaccccctcccctcaggagggagccactgcagtttgacccctccctgatgttcctg
gagtcccagaaggtggtgcgtgattggctgagcggtcgtggaggagtggtggtacctgga
gcgggcgttgctcttccgtatttgccgccgttcatcagcagtctgtgtactctgagcgcg
ctgctgcgggccaaagattctctgaccaaatcgtctctgcagctgctgagtcaaggctcc
gaaccccgacgctcgacaaccacgcccatacctgacgacagcactgagatgacttccagt
ccgcctcccgacctgcctgactccacctctgacctccgaccggcacaggactctgaagct
ccctccgtcaactctgacctcccgcaggaagacgaggaggagcttgtggcagtggtacgt
cagctggtggcggagcgtttctcaggtaaccccgcctaccaactgctaaaggctcgcttt
ctgtcctgcttcactatccccgcccttctggccaccatgcaaccaatcagagagaggaat
atgtcctgcccagccaatgaggaggaagaggagaaggaggatgaggaggatgatgaggag
gtgacggagctgaagaagatgaaagagacaggaagacggaggagagctgagagatctgtg
ctgctgtgtgacgggtcaggagctccagccaatcacttctcaggaatcatcaccagcaca
cctggaccggaccggactggatcggaccagtaa
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integrated database retrieval system
