Epinephelus lanceolatus (giant grouper): 117252779
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Entry
117252779 CDS
T07331
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04140
Autophagy - animal
ely04150
mTOR signaling pathway
ely04218
Cellular senescence
ely04910
Insulin signaling pathway
ely05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117252779 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117252779 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
117252779 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117252779 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117252779 (tsc1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
MPP6
Motif
Other DBs
NCBI-GeneID:
117252779
NCBI-ProteinID:
XP_033475828
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Position
4:6181420..6213003
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AA seq
1084 aa
AA seq
DB search
MSSQQVSIAELLLLLDSSELQEAEQVRAAVNQQLSTDRGGAVLSSLVEYYLDSSSSQVVL
LLSSIREPHHKPLLEKLNETLNRPGSRLAALTLLGHLIRKQPPWVHHISRSPLLPSLLRC
LKTETDVVVLITGVLVLITLLPMIPQAGKQHIYDFFDVFGRLASWSYKNPGHVPVVHLVH
LHAGVYSLFHRLYGMFPCNFISYLRLHYSMKENLDTFQEVVKPMLEHVRVHPELVTGTQD
YELDPSRWRCYEVHDIVIECSRVSLDPLESSCEEDVYSSLRDPPPSPSPSPLPHLNVTSS
PHHADIISSGSSVCPSLLSGRPTQLTLNNTYTQADDVTWSPSSQCGLSTPPPEPAATGSA
HPLSRTTSISSERGVKCPPSTTVPVTPLVEDQDGGLTPDNNNQVKLLTELMGSSTQPVTE
KSDVINNITEDVRPQQPPPSSSSSSSSSSHPVLLTSTPGRDNPSSGSALPPPPSCSISLS
FTPPHPSTTAHTSEEGGPAPSALSPAPPYEPLFELALPRAATLFIGRKTQEALERAAEEQ
EMGGGGGGEQGEDREEEQTCVSPLEVLDQLIVHGHDAHQHLSRRLSAVNKSMDRSHFGGK
QQSMKTKGPAQGEELQSLRSQLLLVHSQLQYERFKRQQHAVRNRRLLRRVINATSLEEHS
VAMKGQLSAQDEEIRCLKLSLQEEQRRYTQLQQDTQTHTEQLNTHIRQLLLQQQDELRDR
QRLQSELQECHSRLRDLEAELQRANNKAYNAEHQLTELSIKLCSSEQLQQQIFLLNQQLV
LMRQTNRALNDQLEGGETHTHTEASMLQCSVGKEYLRLKDSDVQHRQKLEAANHRIAELE
GQLTKKDQLILDLKKLLEDTKVQSRGELSACESRYVALRRVTQTLQTETLHLYSQLHLDA
HTHSRPQDVRPNGGSVALPAPEGSHKPRPSSSSSVGILNGAVETLSTSPLHLPSCSSSPL
SLSPIDSPLAVGSFLEQHARQLFRPANQSQEEEEQQEGEEEEKEEEVEEEDEEEVQPDSP
PLGQEAEEANFLAGSPQTVPPNRAAAPSLPPSGPPAPPADLMLAVRQRRHELSIMDYDET
LPEY
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcagcaggtgagtatcgctgagctcctgctcttattggacagttcagagctg
caggaggcggagcaagtcagagcagcagtcaaccagcagctgagtacagacagaggaggt
gctgtcctctcctctctggtggaatattacctggactcgtcctcctctcaggtggtgctc
ctcctctcctccatcagagagcctcatcacaagcctctgctggagaagctgaatgagact
ctgaacagacctggatccagactggctgctctgaccctgctgggtcacctgatcaggaaa
cagccgccatgggttcatcacatcagccgctcgccgctgctgccgtcgctgctgcgctgc
ctcaagacagagacggacgtggtggtcctgatcactggagtcctggtcctcatcaccctg
ttacccatgatccctcaggccgggaaacaacacatctacgacttcttcgatgtgtttgga
cgcctcgcatcctggagctacaagaaccctggtcatgtacctgtggtccacctggtccac
ctccatgcaggcgtgtactctctgttccaccgtctgtatgggatgttcccctgtaacttc
atctcctacctgaggctgcactacagcatgaaggagaacctggacaccttccaggaggtc
gtcaagccgatgttggagcatgtcagggttcacccagagttggtcacagggactcaggac
tatgagctggacccgtccaggtggaggtgttatgaagtccatgacattgtgatcgagtgc
tcccgagtgtctctggatcctctcgagtcgtcctgtgaggaggacgtgtactcctccctc
agagaccctcccccctccccatcgccctcccccctccctcacctgaacgtcacctccagt
cctcaccacgctgacatcatcagctcaggaagttcagtctgtccttcgctgctgtctgga
cgtccaactcagctgactctcaacaacacctacacacaggctgatgatgtcacatggagt
ccctcctcacagtgtggtttgtcgacgccccctcctgaacctgctgctacaggctccgcc
cacccactgagcaggaccacctccatctcaagtgagagaggtgtgaaatgtcccccatca
accaccgtcccagtgacgccgctggttgaagaccaagatggcggtctgactcctgacaac
aacaaccaggtgaagctgctgacggagctgatggggtcgtccactcagccagtcacagag
aagagtgatgtcatcaataacatcactgaagacgtcagaccccagcagcctcccccttcc
tcctcctcctcctcctcctcctcctcccatcctgtcctcctcacctccacccccggccgt
gacaacccctcctcaggttcagccctcccccctcctccttcctgctccatctccctctcc
ttcaccccccctcacccctccaccaccgcccacacatcagaagagggaggccccgcccct
tccgctctgagccccgcccctccgtatgagcccctgtttgagctcgctctgccccgcgcc
gccacgctgttcatcgggaggaagactcaggaggcgctggagagagcagcagaggagcag
gagatgggaggaggaggaggaggagagcagggggaggacagggaggaggagcagacctgc
gtctctcctctggaggttttggatcagctgatcgtccacggacacgacgcacaccaacac
ctcagcaggaggttgtcggcggtgaataagtcgatggatcggagtcattttggaggtaaa
cagcagagcatgaaaaccaaaggccccgcccagggggaggagcttcagtctctgaggagc
cagctcttattggtccacagtcagctgcagtacgaacgcttcaaacgccaacagcacgcc
gtcagaaaccgccgcctgctgcggagggtcatcaacgcaacctcgctggaggagcacagc
gtcgccatgaagggtcagctgagcgctcaggacgaagagattcgctgtctgaagttgagt
ctgcaggaagaacagagacgatacacacaactgcagcaggacacacagacacacactgag
cagctgaatacacacatcagacagctgctgctgcaacaacaggacgaactgagggacagg
cagagactgcagagtgagcttcaggagtgtcacagcaggctgagggatctggaggcggag
cttcagagagccaataacaaggcttacaatgcagaacaccagctgacggagctgtccatc
aagctgtgcagcagtgagcagctgcaacagcagatcttcttgttgaaccagcagctcgtc
ctgatgagacaaactaacagagctctgaatgaccagctggagggaggagagacacacaca
cacactgaggcgtccatgctgcagtgcagtgtgggtaaggagtacctgcgtctgaaggac
agtgacgtccagcacagacagaagctggaagcagccaatcacaggatagcagagctggag
ggtcagctgaccaagaaggaccagctgatcctggacctgaagaaactcctggaggacacc
aaggtccagagcagaggcgagctgtcggcctgtgagagtcgctacgtcgctctgaggaga
gtcacccagacgcttcagaccgagacgctgcacctgtacagccagctccacctggacgct
cacacgcacagccggcctcaggatgtcaggccaaacgggggcagcgttgccttaccagct
cctgagggcagccacaagccccgcccctcctcctcttcttctgttggtatattaaatgga
gccgtggagaccctctccacctcccccctgcacctcccttcctgctcctcctcccccctg
tccctctcccctatcgactcccccctcgccgtcggctccttcctggagcagcatgcacgg
cagctgttcagaccagccaatcagagccaggaggaggaggagcaacaggagggggaggaa
gaggaaaaggaagaggaggtggaggaggaggacgaggaggaggtccagccagacagccct
cctctgggtcaggaggcggaggaggccaacttccttgcaggaagtcctcagacggtgcct
ccaaaccgcgctgcagctcccagcctgcctccctctggacctcctgcgcctcctgctgac
ctgatgctcgccgtccgacagaggagacacgaactcagcatcatggactacgacgagacg
ctgccagagtactga
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