KEGG   Epinephelus lanceolatus (giant grouper): 117252820
Entry
117252820         CDS       T07331                                 
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ely  Epinephelus lanceolatus (giant grouper)
Pathway
ely03420  Nucleotide excision repair
ely04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ely00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    117252820 (ercc8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117252820 (ercc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ely04121]
    117252820 (ercc8)
   03400 DNA repair and recombination proteins [BR:ely03400]
    117252820 (ercc8)
Ubiquitin system [BR:ely04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     117252820 (ercc8)
DNA repair and recombination proteins [BR:ely03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117252820 (ercc8)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_2nd WD40_RFWD3 WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 117252820
NCBI-ProteinID: XP_033475912
LinkDB
Position
4:19334548..19355336
AA seq 401 aa
MLGFLTARQAGLDDPLRLRRAESTRRVLSLTLNPDRDVDRVHGNGINTIDIEEIEGRYML
SGGADGVIVIYDLENFSGKPQYTCKAVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKDPKIQLCDLKSGSKIH
ILQGHRAEVLSVCWSPRYEHILATASADSKVKVWDVRRASGSLLTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVYNESRKRLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGELVTMLRGHYNNVDCCEFHPDFQELYSGGKDCNIL
AWVPVLRASDVEEEPKSATQAVADRSSVNPAFQDAWSSDED
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgttggggtttctgacagcaaggcaggctggtctggatgaccctctgcgactgagacgt
gctgagtcaacgagaagggtcctgagtctgacgttgaatcctgacagagacgtggacaga
gtccatggaaatggcatcaacaccattgacattgaagaaatagagggcagatacatgttg
tctggcggagcagatggagtgatcgtcatctatgacctggaaaacttcagtgggaaacca
caatacacatgcaaggcagtttgtacagtgggcaggtcgagtcggtatgtccacaagttc
agtgtagagacagtccagtggtatccctatgacacgggcatgtttgtctccagctccttt
gacaagaccatgaaagtctgggacactgagacactcaagcctgctgaggtctttgagttt
gagggcaatgtctacagccaccacctgtctcccattgccaggaagcacagtctcattgca
gttggcaccaaagaccctaaaatccagctgtgtgacctgaaatctggctcaaagattcac
atccttcagggtcacagagcagaggtcctgtctgtgtgctggtcgccgagatacgagcac
atcctagccactgccagtgcagacagcaaagtgaaagtctgggatgtgcgtcgggcctct
ggcagtctcctcactctggatcagcacaatggagacaagtcaaaagcctcctctgaggca
gtgaacacagctcataacggcagagtgaatggcctgtgcttcactggagatggcctctac
ctcctcaccactgggacagatgaccgtatgcgactatggaatagtgccactggggagaac
acactggtaaattacgggaaggtctacaacgagagtcgtaaaaggcttcagttcacagtg
tcgcgtggctgcagcccagagtttgtgtttgtgccatgcggcagctcagtagctgtgtat
gccctgcacacgggagagctggtgacaatgctcaggggtcactacaacaacgtcgattgc
tgcgagttccacccagacttccaggagctgtatagtggaggtaaagactgtaatattctg
gcatgggttcctgtccttcgtgcctcagatgtggaagaagaaccaaaaagtgccactcag
gctgtggctgaccggtcatcagtgaaccctgcctttcaggacgcgtggagcagcgatgaa
gattaa

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