Epinephelus lanceolatus (giant grouper): 117252888
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Entry
117252888 CDS
T07331
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117252888 (smarcad1a)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117252888 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
CUE
ERCC3_RAD25_C
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
117252888
NCBI-ProteinID:
XP_033476037
LinkDB
All DBs
Position
4:complement(19867080..19883044)
Genome browser
AA seq
1067 aa
AA seq
DB search
MFNLERFRYDKKGATTTNKEQESGSKSPESEKENKPAKMKPVKTPSKSHARGVVFEEVIS
IDLEEDERLPEVKSKTPHSRKSKSPKGKSSNNVASYHTDDEDNELEEKMNRILEIFPHLP
RTELLEIIGSTSTLDGAVAACLLKFGDKEAPHQGRKRKQDGSSSSQDSGDIQPSKKSKPS
EELTSDDEDDDDKEPNWEKQEAMVRKLQKKFPDQDKEELRMVLQEHDWNVEDALQVLQMF
SDPDNTSYSSPDTEEKKSSKEKSKDKTSKNHRNLKHHKVSKSRRGQKDSKYHRNVSESEE
DSKDDTDATKDSEEESDSDNSDGPEKRSSTSTLSSWLKKCSDFVPSSSSVKKTTTSAPPK
PSSSSSTAQMLSRFASGTSIAKKQAAERKRKARASNEHVSSEGENDDEEDTVSTEFEDSD
DELDTESGMTDLKKEILKFFQDASIDELTLIAGCSVKKAQKIVELRPFDSWKSLVDVFHK
DNGLSENLLLGCRVVLKERNIVLGLMSKCETIASKMVKQVTQLTDRGTGATKQPTLLNSQ
FQLKPYQVIGLKWLLLLHEHKLSAILADEMGLGKTIQAIAFLAQLYQNGIEGPHLIIVPA
STLDNWVRELKLWCPSLKVLVYCGSVEDRRYLRHDLLNEDVECNVIVTTYNMAIGNDSDR
GLFRKLPLKYAVFDEGHMLKNMNSLRYRHLMAINAEHRLLLTGTPLQNNLLELMSLLNFI
MPSMFSSSHSQLSKMFSMKSHEEQSRFERDRISQAKLIMKPFILRRVKNEVLKQLPAKEE
KVEFCPMSEKQQVLYQTLFKKLKASINGEKRELCNVMMQLRKMANHPMLHRQYYTTEKLK
AMSKLMLKEPTHFDADAALIQEDMEVMSDFELHRLCQQYSSISSYQLENNVLLDSGKFHH
LTELMASLKNKGDRVVLFSQFTMMLDIVEVLLKHLKHRYVRLDGSTPIAERIVLIDEFNT
DPDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKTVKVIKLI
SKDSIEDCMLQLSQKKLKLEQDMTAVDGDDGTIPEDMATLLKASLGL
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacttggagcgctttcgttatgacaagaagggagcgacgacgacaaacaaagag
caggagagcgggtccaaaagtccagagtctgagaaggagaacaagccagctaagatgaaa
cctgtgaaaaccccatcaaagtcccatgcccgaggagtggtgttcgaggaagtcatctca
atcgacttggaggaggatgagcgactccctgaagtaaagtccaaaacaccacacagcagg
aagtccaagagtcccaaagggaagtcatcgaacaatgtggcatcatatcacacagatgac
gaggacaatgaattggaggagaaaatgaacagaatactggagatatttcctcatttgcca
aggacagagctgcttgagatcattgggagcacaagcacattggacggggctgtagctgca
tgccttttaaagtttggggataaagaagctccacaccaaggcaggaagagaaagcaggat
ggatccagcagttctcaggacagtggtgacattcaacccagcaagaagagtaagccatca
gaagaactgacttctgatgatgaggatgatgacgacaaagagccaaactgggagaagcag
gaagccatggtcagaaaactgcagaaaaagtttcctgatcaggacaaggaggagctgcgg
atggtgctgcaggaacacgactggaatgttgaggatgctctgcaggttctacagatgttc
tcagacccagataataccagttacagctcacctgatacagaagaaaagaaatccagtaaa
gaaaagagcaaagacaagacaagcaagaaccacaggaatctgaaacaccacaaagtcagt
aaaagtaggagaggtcaaaaggactctaaataccacagaaatgttagtgaatcagaggag
gacagtaaagatgatacagatgctacaaaggacagcgaagaagagtcagactcagacaac
agtgatggccctgaaaaaaggagtagcacttccactttgtcctcatggctcaagaaatgc
tctgatttcgtaccttcatcctcctctgtcaagaaaacaactacctcagcccccccgaag
ccatcctcttcttcctctactgcccagatgttgtccagatttgccagtgggaccagtata
gctaagaagcaagcggcagagagaaagaggaaggcgcgtgcctcaaacgaacatgtcagt
tctgagggggaaaatgacgatgaagaggacactgttagcactgagtttgaggactctgac
gatgagctggacactgaaagtggcatgacagacctgaagaaggaaatactgaagttcttc
caggatgcatcgatcgacgagctgacgctgattgcggggtgctctgttaaaaaggcccag
aagattgtggaactgaggccctttgacagttggaagagtctggttgacgtcttccacaag
gacaatggactgtcggagaacttactgctgggctgcagagtcgtcctcaaagagcggaac
attgtcctggggctgatgtccaaatgtgagaccattgcatcaaaaatggtcaaacaggtt
actcagctgacggacaggggcacaggagccactaaacagcccaccctgcttaacagtcag
ttccagttgaaaccctaccaggtgattggtctaaagtggctgctgcttctgcatgagcac
aaactgagtgctatcctcgctgatgaaatgggtttggggaaaacaatccaggctattgca
tttctggcccagctatatcagaatggaatagagggtcctcacctcatcattgtgccagcc
tctacattggataactgggtcagagagctgaagctttggtgtccaagcctcaaagtgctc
gtctactgcggatctgtggaggaccgccgctacctcagacacgacctcctcaatgaagat
gttgagtgcaacgtcattgtgaccacgtataacatggccataggtaatgacagcgaccgt
ggccttttccgtaagctgcctctgaagtatgcagtgtttgacgaaggtcacatgctgaag
aacatgaactctctgcgctaccgccaccttatggctataaacgcagagcatcgcttgctg
ctgacaggaacgcctttacagaacaacctcttagagctgatgtctctcctgaacttcatc
atgccttctatgttctctagctcccattcacagctctccaaaatgttttctatgaaatcc
catgaggagcagagccgcttcgagagggatcgtatttctcaggccaaactcatcatgaaa
ccttttatcctgcgaagagtcaagaacgaggtcctcaagcagctgccagccaaggaggag
aaggttgagttctgtccaatgagtgagaaacagcaggttctttaccagactctgtttaaa
aaactcaaggcctccatcaatggcgagaagcgtgagttgtgtaatgtgatgatgcagctg
aggaagatggccaaccatcctatgcttcatagacagtactacaccacagaaaagctcaaa
gccatgagcaaactcatgctcaaggagccaacccactttgacgcagatgctgctctgatc
caggaggacatggaagtgatgtcagactttgagctgcatcgtctgtgccagcaatactcc
tccatcagctcctaccagcttgaaaacaatgtcctgcttgactctgggaaattccaccac
ctcacagagctgatggcctcacttaaaaacaagggagaccgagtggtattattcagtcag
ttcaccatgatgctggacattgtggaggtgctgctgaaacatcttaagcatcgttacgtc
agactggatggatccacccccatagcagaaaggattgtgttgatcgatgagttcaacaca
gatcctgacatatttgtgttcctgttgtcaacacgtgctggcggcctgggcatcaacctc
acctcagccaatgttgtcatcctacacgacatcgactgcaatccttacaacgacaagcag
gcagaagacaggtgtcaccgcgtcggccagaccaagactgtaaaggtgattaagctgatc
agtaaggacagcatagaggactgcatgctgcagctgagccagaagaaactaaagctggag
caggacatgacggctgttgacggtgatgatgggaccattcctgaagatatggcaactttg
ctcaaagcctcactgggactgtga
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