Epinephelus lanceolatus (giant grouper): 117253130
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Entry
117253130 CDS
T07331
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117253130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ely03036
]
117253130
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117253130
REST complex
117253130
Heterochromatin formation proteins
Other heterochromatin formation proteins
117253130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117253130
NCBI-ProteinID:
XP_033476388
LinkDB
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Position
1:56842933..56866490
Genome browser
AA seq
1302 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQARRPPVQGIADSFQHRALAPAPTVIEAAADNMQPSTGIQYSL
PQGYQVPTMPQSTSGHGHGHGHNNAAPHVGPHAHSLAVQSQGPAVVQGHVHPPAPMTSTQ
GQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKG
HPDLIMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPVTGAPSQAASHN
QHQSLPQAGPHTTTTTTTTTTTNTPPTSTQPAPSKTSKPIQSPAHTPTSQPNPSIPSYAS
PRSPSVQSHTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHT
YQKEQRNAKEAGGNYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSMLLGKTTP
DRAESVRNDHGGTVKRPLLNNKQRLSQNGLPIRRPAGVGATPPVKKKPKILGKDHGVTEI
GKHSTSTETMFFEKVRKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELF
TWFKNFLGYRESSHGESSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKC
TGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLATI
RALETVQRRLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKAHDIIDGLKKNPAV
SVPIVLKRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLL
NEIEMLYDDRQERASDETATLPPSGPHMTVTYEDSQILEDAAALIIHHVKRQVGIQKEDK
YKIKQIIHHFIPDLLFARRGELSDVEEEEEEEEEAMEMDPDGPKKHNGLPGSSPSKSKLL
FSNTAAQKLRGTDDAYNMLYVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDAREREWE
REVLGLKREKNENPAIQLKMKEPMDVDVEDYYSVFLEMVRNLLDGNMEPAQYEDSLREMF
TIHAYIAFTMDKLIQSIVRQLQHLVTDDVCARVTDMYLSESANKATGGSLSTQTSRATAE
GAYQRKAEQLMSDENCFKLMFIKSRGSVSLAMELLDTEEVNSDEPAEAERWSDYVGRYLN
SDSASPELREHLSQKPVFLPRNLRRIRKCQRGWEQLQQERMNKVPSDKLQVGNSELKMEC
MFKLNSYKMVYVCKSEDYMYRHTALTRAHQSQERVNTRLHRRFHAWLDTWAKEHVTSDMA
ADNHKWLMGERREGLLPCTTTCNPEVLHYININKYRVKYRIL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgtgtggaggaccaggaaccaatatttgcgccccagcaacagcaagcacgt
cgccccccagttcaaggcattgcagacagcttccagcaccgggccctcgccccggcccct
actgtgatagaggcagctgcagacaacatgcagccatcaactggcatccagtattctctc
ccccaaggctaccaggtgcctacaatgcctcagagcacaagtggacatggacacggacat
ggacataacaacgctgcacctcatgttggtccccacgcacacagcctggcagttcagtcc
cagggccctgcagtggtccaaggtcacgttcacccacctgcacccatgacttcaacccaa
ggacagcagtttcagcgactgaaggttgaagatgccttgtcctatctggatcaagtgaag
ctgcagtttggaaatcagccacaagtttataatgatttccttgatatcatgaaagagttc
aagtcacagagcatagacacgcctggagtcatcaaccgcgtgtcccagctcttcaaaggc
catccggacctcatcatgggttttaacactttcctgccacccggatataagattgaagtt
caaactaatgatctagtcaacgtgaccacgccgggtcagatccactacatcacccctcat
ggtatttctgttcagaacatccctgttactggagcgcccagccaagctgcgagccacaac
cagcaccagagtctgccacaggctgggccgcacaccactaccaccaccaccaccaccacc
accaccaacaccccgcccacctccacccaacctgctccaagtaaaaccagcaagccaatt
cagtctccagcccacacacccaccagccagcccaacccatccatcccatcctacgcctca
ccgcgctcaccttcggttcagtcccacactcctgtgagcagcacgccgtccggtgggcca
cctctccagaacaaccagccagtggagttcaaccacgctataaattatgtcaacaagatc
aagaaccgcttccagggtcagcctgacatctacaaagccttcctggaaatccttcacaca
taccagaaggagcaacgaaatgctaaagaagcaggaggaaactacactccagcgctgact
gagcaggaggtctacactcaggtggcaagactcttcaagaaccaggaggacctgctctca
gagttcggacagttccttccagatgcaaacagctcaatgctgcttggaaagaccacacca
gacagggcagagtcagtgcgcaatgaccacggcggcacagtgaagagacccttactgaac
aacaagcagagactgagccagaacggcctgccaatcaggaggcctgctggagtgggagca
acaccacctgtcaagaagaagcccaaaatattgggaaaggaccatggcgtgactgaaatc
ggcaaacacagcaccagcactgaaactatgttctttgagaaggtgaggaaggctctgcgg
agctctgaggcgtatgacaacttcctgcggtgtcttcatattttcaaccaggaagtaatc
tctcgtgcggagctggtccagttagtcataccgtttctgggaaaattcccagagcttttt
acatggtttaaaaacttcctggggtaccgagagtcaagtcacggggagtcgagccacgca
gagagtttacccaaggagcgtgcaacagagggcatcgccatggagattgactacgcttcc
tgcaagaggctggggtccagctatagagcactgccgaagagctaccagcagcccaagtgc
acaggaaggacgccgctgtgcagagaggttctcaatgacacgtgggtgtcgtttccatca
tggtctgaggattctacatttgtaagctccaagaagactcaatatgaggagcacatttat
agatgtgaggatgagcgctttgagctggacgtcgtgttggaagccaacctcgccacgata
cgagccctggagacggtgcagcggaggctgtctcgcatgtcagctgaggagcaactgcgt
ttcaagctggacaacacgatgggcggctcctcagaggtcattcaccgcaaagctatccag
aggatatatggagacaaggcccacgacatcatcgacgggctcaagaaaaacccagctgtg
tctgtccccatagtgctgaaaagattaaaaatgaaggaggaggagtggagagaagcacag
agaggcttcaataagatctggcgggagcagaatgaaaagtattacctgaagtcactggac
catcaaggcatcaacttcaagcagaatgacaccaaagtgttgcgttcaaagaccttactc
aatgaaattgagatgctatatgatgaccgccaggagcgagcatcagatgaaactgccaca
ctgcccccgagcggccctcacatgaccgtgacctatgaagacagccaaatcctggaggat
gctgccgccctcatcatccaccatgtcaaaagacaggtgggcatccagaaagaagacaag
tacaagatcaaacagatcatccaccacttcatccctgacctgctgtttgcacggcgaggt
gagctctctgatgtggaggaggaggaagaagaggaggaagaagccatggagatggatcca
gacggccccaagaagcacaatggcctgccaggcagcagcccatcgaagtccaagctcctc
ttcagcaacactgcagcacagaagctgcggggcacggacgatgcctataacatgctctac
gtgaacaactactggtacatcttcctccgtcttcaccacatcctctgctctcgtttactg
cggatctacgggcaggctgagaaacagattgaggaggatgcccgtgagcgagagtgggag
agagaagtgttggggctcaagagggagaaaaatgaaaatccagcgatccagttgaagatg
aaggagccaatggatgttgatgtcgaggactattactcagtgtttctggaaatggtgcgt
aatcttttggatgggaacatggagccggctcagtacgaggactccctgagggaaatgttc
actatccatgcctacattgccttcaccatggacaaactcatccagagcatcgtccggcag
ctccagcacctcgtcaccgatgatgtatgtgcgcgcgtaacggacatgtacctaagcgaa
agtgccaataaagccacggggggctcgctgtccacgcagacatccagggccacagcagag
ggggcctaccagcgcaaagcagagcagctaatgtccgatgagaactgcttcaagttgatg
tttataaagagccgaggatcagtcagtctggccatggagctgctcgacacagaagaggtg
aactctgacgagccggcagaggcagagagatggtcagactacgtgggcagatacctgaac
tcagattctgcgtccccagagctgcgcgagcatctgtcccagaagccggtgttcctcccc
aggaatttgaggcggatcaggaagtgccagagaggatgggagcagctgcagcaggagaga
atgaacaaggtcccctcggacaagttgcaggtcggcaacagtgagctaaagatggaatgc
atgttcaagctcaactcctacaagatggtgtacgtctgcaagtcagaggactatatgtac
aggcacacggcactcacacgggctcatcagtctcaagagcgggtcaacacgcggctgcac
agacgctttcacgcctggctggacacctgggccaaggagcacgtgaccagcgacatggct
gccgacaaccacaagtggctgatgggagaaagacgagaaggcctgttgccctgcaccacc
acttgcaaccctgaggtcctccattatatcaacattaacaagtaccgggtgaagtacaga
atactgtag
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integrated database retrieval system
