Epinephelus lanceolatus (giant grouper): 117253213
Help
Entry
117253213 CDS
T07331
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117253213 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ely03400
]
117253213 (polb)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117253213 (polb)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
117253213 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
117253213 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
117253213
NCBI-ProteinID:
XP_033476495
LinkDB
All DBs
Position
4:15210842..15219667
Genome browser
AA seq
338 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEKMETLILGELEQIDPEYIGTICGS
YRRGAASSGDIDILLTHPDYTSLTPKQPKLLHAVVDHLESMGFVTDTLSKGDTKFMGVCQ
LQQSDEDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYT
IRPLGVTGVAGEPLLVDSERDIFEYIHYKYREPKDRSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaggaatccctaaatgagggaataacagactttcttgtc
gagttggccaattacgagaaaaacgtcaacagggcaatacacaagtacaatgcctacagg
aaagcagcatctaccattgccaagtaccctaacaaaatcaaaagtggcgaagaggccaag
aaactggatggtgtcggagctaaaatagcagaaaagattgatgagttcctacagacaggc
aaactgcggaaactggaaaagatccgtaatgatgacaccagctcttcaatcaatttcctc
accagagttactgggattggccctgctgcggccaggaagttttttgatgaaggggtgaag
acattagaagatttgaaaaagattgaacacaagctaaatcatcatcaacagattggactc
aagtattttgaggaattcgagaaaaggattccacgtgctgaaatggaaaagatggagact
cttattctgggagagttagagcagatcgacccagaatacatcggaacaatctgtggcagc
tacaggagaggtgcagcatcgagtggtgatattgatattttgctaacccacccagactat
acctctctgactccgaagcagcccaagctcctccatgctgtcgttgaccatttggagtcc
atgggttttgtgaccgacaccctgtccaaaggagacaccaaattcatgggagtctgccag
ctgcagcagagcgatgaagatgaagatgaggaagaataccttcacaggcgtattgatatt
aggttaattcctaaagaccagtactactgtggagttctgtatttcactggaagtgatatc
ttcaataaaaacatgagaacacacgctctggagaagggcttcactcttaatgagtacacc
atacgaccacttggagtcactggtgtggcaggagagcctctgttggtggatagtgagaga
gacatctttgaatacatccactacaaatacagagagccaaaggaccgcagcgagtga
DBGET
integrated database retrieval system
