Epinephelus lanceolatus (giant grouper): 117253664
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Entry
117253664 CDS
T07331
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117253664 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
117253664 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117253664 (lsm7)
03041 Spliceosome [BR:
ely03041
]
117253664 (lsm7)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117253664 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
117253664 (lsm7)
Spliceosome [BR:
ely03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117253664 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117253664
NCBI-ProteinID:
XP_033477132
LinkDB
All DBs
Position
5:27155032..27159096
Genome browser
AA seq
124 aa
AA seq
DB search
MAVSSYGFRFHSSLFFTFAPLNMDKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKG
FDPLLNLVLDGTIEYMRDPDDQLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQ
QQDG
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagttcgtatggttttcgctttcattcaagcctcttttttacatttgcaccc
ttaaacatggataaagagaagaagaagaaggagagcatcttcgacttgtcaaaatacatc
gacaagccgattcgagtgaagtttcaaggaggacgagaggccagcggtgtcctgaagggt
tttgacccgctgttgaacctggtgttggacggaacaatcgagtacatgcgtgatcctgac
gaccagctgaagctgacagaagacaccaggcagctagggctggtggtctgcagaggaacc
tccgtagtgctaatctgtcctcaggatggcatggaggctataccaaaccccttcatacag
caacaggacggctag
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integrated database retrieval system
