KEGG   Epinephelus lanceolatus (giant grouper): 117253924
Entry
117253924         CDS       T07331                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ely  Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:ely00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ely03036]
    117253924 (kdm4b)
Enzymes [BR:ely01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117253924 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117253924 (kdm4b)
Chromosome and associated proteins [BR:ely03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117253924 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 53-BP1_Tudor Tudor_5 FliD_N SLX1_C
Other DBs
NCBI-GeneID: 117253924
NCBI-ProteinID: XP_033477693
LinkDB
Position
5:20929956..20988886
AA seq 1218 aa
MATDMPIDTVPAPQPAPASPPDPAPASNPALSPSAAQDQTATQEPANGEIIGPTATSSEN
DAAPDLSPTLPTNPDVAPDIAPKVEQPPAPLPPASANNPSCKIMTFHPTMEEFKDFAKYI
VYMESQGAHRAGLAKVIPPEGWKPRRSYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQKKS
MTVSEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDVQEWNIG
HLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQPKSWYAV
PPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNEGEFMVTF
PYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDRYEL
WKQGKDITVLDHLKATVLSSPELEQWREHRVNHRANVLRRAMQKMKQVRRLKLEEVKVLA
QEGIELNAAEYQRQVEEREAQRRQEREERLAKEAMMTLEAMEREEQEAAEAAARAAENPA
VEAEEPEAKPQNPMEDTEKKKQKKQKKMSNSNNSITGFEAAFEQFATSGIKNSKNATISH
PEVGNPLTPRQSDIPADNKLDVSATQACYSKVKMPKEVKIPKEVKKPKEVKKSRRHPLSK
PPMRSPLSILKQDPTSDKELSSPMPLDSDMKKQEHLWQNHSPNFLAEKAFNAAVAALQPH
CAICSLFCPYTKAHKDVILAKDNQRASLPRLTRPLVPEMCFSIGAGNTEPPPTNYHIGED
GTSPLLCCSSCHMQVHASCYGIKPDAVRDSWMCSRCAAGAWIVECCLCNLRGGALKITTD
NRWVHVICAIAVAEARFVNAMEREPVDVTAVPDTRKNLKCVFCHGKTANQNRGACIQCSY
ENCATSFHVTCAQIAGVAMTPADWPYVVSVTCHKHKRVPQKPRTAPKGPQPLILGQRVIG
RNSDGWYYHCTIIGMATQTFYEVNFDDGSYCDNLHPENILSHDCLHTGPPEVGELIVVST
PEGQVVNASFVRQHTHKFYQVEFLDQSQLILKHSEIHQLDLELPKRVRARLAIPVPQEEV
SSADEAQAAKRRCLPSGSAAPAETPMETTDTAACPLTTAPVAAPAAEHHSISTLPTSQPL
SQSTTTPHDAPAPTSGIKMEAESPMDTSVALTDALTESTLASDPTPTPQTPFSVDVSYME
TLLNSHFPQDNSPNAALY
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggctaccgacatgcccatcgacacggtgccagctcctcagcctgccccagcctcgccc
cctgaccctgccccggcctctaatcctgctctcagccccagtgcagcacaagaccagact
gccacccaggagccggcaaatggtgaaatcataggcccaacagcaacttcttctgaaaat
gatgctgctccagatctttccccaactctgcccacaaacccagatgtggccccagacatt
gccccaaaggttgagcaacctccggcccctctgccgccagccagtgccaataaccccagc
tgtaaaatcatgaccttccaccccaccatggaggagttcaaggacttcgctaaatacatc
gtctacatggagagtcaaggagctcaccgtgctggcctggcaaaggtgattcccccagag
ggctggaagccgcgaaggtcctatgacaccattgaagacatggtgattccagctcccatc
atgcaggtggtgaccggacagtcgggtctcttcacccagtacaacatccagaagaagtcc
atgactgtgagcgagtaccgcaagctcgccaacagtaaaaagtactgtacacctcggcac
aaagactttgacgacctagagaggaagtactggaagaacctgacatttgtgtcacccatt
tatggtgccgatgtcagtggctccatctatgatgaggacgttcaagagtggaacatcggc
catctcaatacactgctggatatggtggagcaggagtgtggcattgtcatcgagggtgtc
aacactccctacctgtacttcggtatgtggaagaccacatttgcttggcacactgaggac
atggacctctacagcatcaactacctgcactttggacagccaaagtcctggtatgctgtc
ccacctgagcacggcaagaggctggagaggctggcacaaggcttcttccctggcagctct
caaggttgtgacgccttccttcgccacaagatgacgctgatatctccttccatcctgaag
aaatacggcattccttttgacaggataactcagaatgaaggggagttcatggtcaccttt
ccttatggctaccatgctggcttcaaccatggcttcaactgcgcagagtccacaaacttt
gccaccttgcgctgggtggactatgggaaaatggcaacccagtgtacctgtcgtaaagac
atggtgaagatctccatggacgtgtttgtgcgctgcctgcaacctgaccgctacgagctg
tggaagcagggcaaagacatcacagtgctggaccacctcaaggccactgtgctcagcagc
cccgaactagagcagtggagggagcatcgtgtaaaccatcgagcgaatgtcctgcgaagg
gccatgcagaagatgaaacaggttcgtcgactgaaactggaggaggtgaaggtgctggcg
caggaaggcattgagctgaatgctgccgagtaccagcgtcaggtggaggagcgcgaggcc
cagcggaggcaggagagagaggagcgtctagccaaagaggccatgatgaccctggaggcc
atggagcgtgaggagcaggaggccgccgaggccgctgctagagcagcagagaacccagct
gtagaggcagaagaaccagaggccaaaccgcagaacccgatggaggatactgagaaaaag
aagcagaaaaagcaaaagaagatgtcaaatagcaacaactccatcaccgggtttgaggca
gcatttgagcagtttgctacatccggcattaagaattcaaagaacgccacgatcagtcac
ccagaggtggggaaccctctgactccgagacagagtgacatcccagcagacaacaagctg
gatgtgagtgccacacaggcatgctactccaaggtgaagatgccaaaagaggtgaagata
ccaaaagaggtgaagaagccaaaggaggtgaaaaagagccgccgtcaccccctcagcaag
ccgcccatgcgctcccctctgtccatcctcaagcaagaccccaccagcgacaaagagctg
tcatcccccatgccgctggacagcgacatgaagaagcaggagcacctgtggcagaatcac
tcccccaacttcctggcagagaaggcctttaatgctgcagtggcagcactccaaccacac
tgcgcgatctgttcactcttctgtccctatacaaaggcacacaaagatgttattcttgca
aaggacaaccagcgcgcctcccttccccgtctgactcgtcccctggtcccagagatgtgt
ttcagcattggtgcaggcaacaccgagcctccgcccaccaactatcacatcggagaggac
ggaaccagtcctctgctctgctgttcatcttgccacatgcaggttcatgccagttgttac
ggtataaagccagacgctgtgagggattcctggatgtgctccaggtgtgcagcaggagcc
tggatagtggagtgttgtctctgtaacttgcggggaggagctttgaagatcaccacagac
aacaggtgggtccacgtcatctgtgccatcgctgtggccgaagcccgcttcgtcaacgcc
atggagagggagccagtggacgtcactgccgttccagatacacgcaagaatctgaagtgt
gtgttctgccatggcaagactgccaatcagaaccgcggcgcctgcatccagtgctcatac
gagaactgtgccacctcctttcacgtcacctgcgcccaaatcgccggagtagccatgacg
cctgcagactggccctacgtggtgtccgtcacctgccacaagcataaaagggtacctcag
aagcctcggacagcccccaaaggcccgcagcctctgattctgggccagagggtgattggt
cgcaacagtgacggctggtactaccactgcaccatcattggcatggcaacgcagacgttc
tacgaagtcaactttgatgacggctcatactgtgacaacctgcacccagaaaacatactt
agtcatgactgcctgcataccggtcctcctgaggtgggggagttgattgtggtcagtacg
cccgagggacaggtcgtcaacgcttcgtttgtcagacagcacacccacaagttctaccag
gttgagtttctggatcagagtcagctgatactaaaacactcagagatccatcagctggac
ctggaactgcccaagagagtccgagccagactggccatacctgtcccacaggaagaggtt
tcctcagcagatgaagctcaagcagccaaacgtcgctgtctgccctcaggctcagccgca
cctgctgaaacccccatggagacaaccgacacagccgcctgccccctaactacagccccg
gtagcagcaccagcagcagaacatcacagtattagtacactgccgacctcacaaccccta
tcccagtccactacgaccccacacgatgcccccgccccaaccagtggtattaagatggag
gccgagagcccgatggacacgagcgtcgccctcactgatgctctaacagagtcaaccctg
gcctcggaccccacgcctactccacagacccctttttcagtcgacgtttcctacatggag
accctcctcaattcacatttccctcaggacaatagccccaacgcagccctgtattaa

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