Epinephelus lanceolatus (giant grouper): 117253949
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Entry
117253949 CDS
T07331
Symbol
hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117253949 (hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ely03041
]
117253949 (hnrnpm)
Spliceosome [BR:
ely03041
]
Common components
Common spliceosomal components
hnRNP proteins
117253949 (hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
RRM_3
RBD_DEAH11
Lipoprotein_18
HnRNP_M_NLS
Motif
Other DBs
NCBI-GeneID:
117253949
NCBI-ProteinID:
XP_033477746
LinkDB
All DBs
Position
5:26931170..26938996
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AA seq
690 aa
AA seq
DB search
MSTEQTENTNVTEKAGQQAPPPQQQQTGEVNGKAKHEPSSSRKERPQKRGGGGRYEPYGN
VNKRYRVFVSNIPYDVKWQALKDLMKEKVGEVTYVEHLMDAEGKSRGCAVVEFRTEELMR
KAVEKVNKHNLNGRPLKVKEDPDGVIAQREMNKSQGGGPPGGHGGMGGMDRMNMDRMGPG
PTGPMVNIPPSLMNNPNIPNEIIHGLQAGRIGSTVFVANLDYKVGWKKLKEVFSMAGMVV
RADILEDKDGKSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKDFGPPD
NRSAALPRGLSGIGLGLGPGGQPIDATQLNRGGGGGGGMGNMGPGGMDGMGFGNMGGRMG
GGGGSGGGMDNFGGMNNMDRFGSSGMGRMNEMDRGIGGAFDREFGRNEMGMSRNSFGESF
ERGMGNSMGMDRMSSGMDRLGASIDRMGGMDRMGMDRMDRGSDLDRLGSGFDRMGSGMDR
LGPSMDRLGPGLDRMSSSMDRLGPAGFDRLGPSGLDRMGSGLDFGSPMGMDRMGNTGLDR
MASSFDRMGSAGGLDRFSAGGLDRMSSGMDRMGSGGVGGQFDRSADMDRGFGGNSFGGAG
GAGTGGGNIRKGCQIFVRNLPFDFNWKMLKDTFNTCGMVQYADIKMENGKSKGCGVVRFD
SPETAERVCRTMNGYRLNGREIDVRIDRNA
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgagcagaccgaaaatacgaacgtgaccgagaaagcaggccagcaggcgcct
ccgccgcagcagcagcagacgggagaagtgaatgggaaagccaagcatgagcccagttcc
agcaggaaggagaggccccagaagagaggtggaggcggtcgctatgaaccctatggaaac
gtgaacaaacgataccgcgtgtttgtcagcaacataccatacgatgtcaaatggcaagct
cttaaagacctgatgaaagaaaaagtgggtgaggtaacgtacgtggaacacttaatggac
gcagaaggcaaatcgaggggttgtgctgttgttgagtttaggaccgaagagctaatgagg
aaagcagtggagaaggtcaacaagcacaacctcaatggacgacccctaaaagtgaaagag
gaccctgatggtgtgattgctcaaagagaaatgaacaagagtcaaggtggaggccctcca
ggaggccacggcgggatgggaggaatggatcgcatgaacatggatcgaatgggccctgga
ccaactggacccatggtcaatattcctcctagcctgatgaacaaccccaacatccccaat
gagatcatccatggtctccaggctggcaggattggcagcactgtctttgtggctaatctt
gactacaaggttggctggaagaagctgaaagaggtattcagcatggcgggcatggtggtg
agggccgacattctggaggacaaggatgggaaaagcagaggcatgggcacagtgacattt
gatatgcctattgaagcagtccaggctgtctctatgttcaatgggcagctgttgttcaac
agagtcatgcacgtcaaactggatgagaaatccctgcccaaagattttggaccacctgac
aacaggtctgctgctcttccccgtggcctgagtggtattggtttgggacttggacctggt
ggtcagcccattgatgctacccagctcaacagaggaggtggtggtggtggaggaatgggc
aacatgggccctggaggaatggatggcatgggctttggcaacatgggaggtcgtatggga
ggcggtggtggcagcggaggaggaatggacaacttcggaggaatgaacaacatggatcgt
tttggctcttcaggaatgggcagaatgaacgagatggaccgtgggattggtggtgctttt
gacagggagtttgggcgaaatgaaatgggaatgtctcgcaatagttttggagagtccttt
gaaagaggaatgggaaactccatgggtatggaccgaatgagctccggaatggaccgcctg
ggagccagcattgaccgcatgggtgggatggatcggatgggcatggacaggatggaccgc
gggtctgacctggacaggctgggttctgggttcgaccggatgggctcagggatggaccgg
ctggggcccagtatggacaggcttggacctggcctggaccgtatgagctccagcatggac
cgccttggcccagctgggtttgaccgcttaggcccgtctggtttggatcgcatgggttct
ggcctggactttggctccccgatgggtatggatcgcatgggcaacaccgggcttgacaga
atggccagcagcttcgaccgcatgggctctgccggaggacttgaccgcttctccgccggt
ggccttgaccgcatgagctctggcatggatcggatgggatctggaggtgttggtggccag
tttgatcgctctgctgacatggatcgtggatttggtggtaattcctttggtggagctgga
ggggctggaactggaggaggcaatatcaggaagggatgtcagatctttgtcagaaatctg
ccatttgacttcaactggaagatgcttaaggacaccttcaacacatgcggcatggttcag
tatgctgatattaagatggagaacggcaagtccaagggctgcggcgtggttcgcttcgac
agccctgaaactgctgagcgtgtctgccggaccatgaacggctaccggctgaacggaaga
gaaattgacgttaggattgataggaatgcataa
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