Epinephelus lanceolatus (giant grouper): 117253983
Help
Entry
117253983 CDS
T07331
Symbol
zgc:172302
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely02010
ABC transporters
ely04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117253983 (zgc:172302)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117253983 (zgc:172302)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ely02000
]
117253983 (zgc:172302)
Transporters [BR:
ely02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117253983 (zgc:172302)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
117253983
NCBI-ProteinID:
XP_033477816
LinkDB
All DBs
Position
5:complement(20446793..20479125)
Genome browser
AA seq
2384 aa
AA seq
DB search
MGFFRQLGLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETTGQVGNFDNSILSRLFVDAQTVLSYSGNRS
LAGFQDLMESVRRLGERPGAWPNLPVEEYLRANETFSTFLLTNGSLSPVTVDQLMKARLN
FQVSVAGAQMQLKDLVCNASMLGQFLTVEGREATMNDLQTQLCNLPTDVLQEAERLFLSQ
LDFTKFFTRERLMANAGDLRVISQAVTSVSHELGVLIDDFSSLSSFADMNAALRLLSPEN
RSAMPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDTDLDRDNNTTP
FCKSLIQGMESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEVNKTFEDLQILQELN
EAWMEVGPRIKNYMESSVEIQMLQGLLKRPEVAVLVNMRLENTSWTASRIARFLSTPSPD
TPQKPGAPPTWLDVYNDLGHTISTLAQVTECFSLNKLEGLETEGQLIDRALELLEDRQFW
AGVVFLLPNSSSPDLPPHVTYKIRMDIDDVTRTNKIKDRFWDPGPAADPFSDMRYIWGGF
VYVQDLVERAVTRILTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSIVPFLVSAGLLIALLKWGDILPYS
DPAVVFFFLTAFATATIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
TYRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLHSSPVEGDSYNFTTSICMLYLDAF
IYATAAWYIEAVFPGEYGIPRPWYFIFQINYWGGAPLEAGMPIPPAPTDQDEDHIEPEPT
NMTLGVNIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRYDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVKAELD
TLLEDVGLLHKRHEQTRNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLCCCGSPLFLKSRLGSGYYLTVVKRE
GLDTSTPSSTSICTSISTNKLPPLKDSESSMSEDTGLGSEESSSYLAALLTLAQQHIPGA
RLVEESGREAVVNLPQKAAKDSSLGVFLAELDQRLTELGISSYGLSDSALEEIFLRVAEE
TGVDAEPELQAESPQQPSAGQRAQRQNAEEPETARKRPRKQEPQETDLLSGDGRGGVPLT
GWWLTWQQLRALFVKRWLYARRSRRGFFAQIVLPAMFVLVALLFSLIVPPFGKYPALQLQ
PWMYGEQYTFFSNDAPGNPAMENLLEALLDKPGFGTKCMDKEEEDNSTSPQCEGERSGLF
MRPQVSYSTWQMFSRGNWSRDTPSPDCLCSTEDIRRMLPDCPQGAGGLPPPQIKRLTGDI
LQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTLSQVHHVEDSIA
AIRTRYQVAQNSSLDHLLIRLPDFLGGLNSQHNVKVWFNNKGWHAMVSFVNVMNNGLLRA
SLPPGPERRKHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFL
IEERVSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLP
ALVLLLLFYGWSITPLMYPASFVFTVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHL
NEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGKNLFAM
AAQGVVFFIFTILLQYKFFIHFRPWWSEPQMPPLGPEDEDVARERERVISGKAQSDILTL
IDLSKVYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTDVTYGEAFLNH
HSVLTEMERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVQEESVAKVAQWGVKKLGL
TQYAEREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSITKEG
RAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADAKSDPDS
CPISTYMKSSFPSIELKERHQSVLQYQLPSHACCLARVFDVLANNYEELGIIDFSVSQTT
LDQVFVNFAKEQTDDDLLTDVVVSNTTVQTNLTALSTRINPPTIQPQPPVTPPRTSKTPQ
KQGKPSDSKPKEGKSKKPKAGKVKSKEGKANGEKSSGTAMTRIPQREEKAQRKSQRGSSG
SDSSNGGVQGESSKPSGSKHKAESSSKSPSALFIVDSNTQDRAL
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttccgacagcttggcctcctgctctggaagaacatcacgtaccgcaggagg
aacaagatccagctgatcatcgagctcctctggccgctcttcctcttcgtcatcctcatc
tccgttcgccattcacaccctccctacaaacagagccaatgtcactttccaaacaaagcc
ttgccatcagcaggcaccttgccctggattcagggcattatctgcaacatcaacaacccc
tgcttccacagcccgacaccaggagagacaacaggccaagttggcaactttgacaactcc
atactttctcgtctcttcgtggacgcccagactgttctgtcctacagtggaaaccggagc
cttgctggctttcaggacctgatggagagtgtccgaaggctgggagagagacctggagct
tggccaaatctcccagtggaagaatacctgagagccaatgaaacgttctccaccttcctc
ctgaccaatggcagcctgtcgcccgtgactgtggaccagctgatgaaggctcgcctcaat
tttcaggtttctgtggctggggctcagatgcagctgaaggacttggtctgcaatgcgagc
atgttgggacagtttcttacagtcgagggaagagaagccaccatgaatgatcttcagact
cagttgtgtaacctcccaacggacgtcctgcaggaggctgaacgccttttcctctctcag
ctcgactttaccaagttcttcacgagagagcgtctgatggctaacgcaggagacctcagg
gtcatcagtcaggccgtcacatcagtctctcatgagctgggggtcctcattgatgatttc
tcctctctctccagctttgcggacatgaacgcagctcttcgtcttctgtctcctgagaat
cgctcggcaatgcccagggagagtttccgtgctttttcgaggatcatgtgcggtcaccct
gaggttggcggtgagcgcatcccatcactcaactggtacgaggacaatgacatcaagtcc
ttcctgggaaaaaacggcactgaggacacagacctggaccgtgacaacaacaccactcca
ttctgtaaaagcttgatccaaggaatggagtccaaccctctgtctcggattgtgtggcga
ggaataaaacctctgtttattggaaaactgctgtacacgccagacactcctgcagtgcaa
caagtcatgaaagaggtgaacaagactttcgaggacctgcagatcctccaggagctgaat
gaagcctggatggaggtcggaccacggatcaagaattacatggagagcagtgtggagatt
cagatgctgcagggtttgctgaagcggccagaggtcgcagtactggtcaacatgcgtctg
gagaacacgtcctggacggcctcacggatcgctagattcctgtccacaccctcgccggac
accccacagaagcccggagcaccgcctacatggctggatgtctacaacgacctcggccac
accatcagcaccctcgcacaagtcactgagtgtttctctctcaacaagctggagggattg
gagactgagggccagttgattgacagagctttggagttactggaggacagacagttctgg
gcaggtgtggttttcctgctgcccaactcttcatccccagacctgccaccccacgttacc
tacaaaatccgaatggacattgatgatgtgactcggaccaacaagatcaaggacaggttt
tgggatcctggtccagcagccgacccgttcagtgacatgcgctacatttggggcggcttc
gtgtacgttcaggacctggtggagagagctgtgacccgcatcctcactggagttcaacag
acaacgggcatctacatccagcagatgccctacccttgctatgtggatgatgttttcctt
agagtgctgaaccgctccctgcctctcttcatgacactggcatggatctactcggtcgcg
atgatcatcaaaggcgtggtgtacgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctgggaacgggaacgctgtggctcagctggttcatcagtagcatagttcctttt
ctggtctctgcagggctcctcatcgctctgctcaagtggggggacatcctgccatacagc
gacccagctgttgtgtttttcttcctgacggcgtttgccaccgccaccatcatgcagtgt
ttcctcatcagcaccttcttctccaaagccaacctggctgcagcatgtggagggctcatc
tacttcgggctctacctgccctacgtactgtgtgtagcctggagagaccgcctcaacacc
acttacagagtcctagccagtttcctgtcccctgtggcctttggcttcggctgtgagtat
ttctctcagtatgaagagcaaggtgtgggcatccagtggtacaaccttcactccagtcct
gtggaaggcgactcgtacaacttcactacctctatatgcatgctttatttggacgccttc
atctatgccacagcagcctggtacatcgaagcagtgtttcctggtgaatatgggataccc
aggccgtggtacttcatcttccagatcaactactggggtggagctcccctggaggcgggc
atgccaattccccccgcacctacagaccaggatgaagatcacattgaaccagaacccact
aatatgaccttgggtgtgaacatcagaaacctggtgaagatctacaaaaagggcgccaaa
ctggccgtcaatcacctcaacctgaagttctacgaggggcagatcacctcattcctcggc
cacaatggagccggcaaaaccaccaccatatctgtcctgactggtctgttcccacccact
tcgggcactgtgtacatcaaggggatggacatccgctatgacatggacatcattcggaaa
acacttggagtttgtccacagcacaatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatgggtgtctgaagggtttatctgaggcagaggtgaaagctgagctggac
actctgctggaagatgtcggcctgctgcacaaacgacatgaacagaccagaaacctctct
ggtggcatgcagaggaagctgtctgtggcgatcgcgtttgtcggaggctctaaagtggtt
gttctggatgaacccacagcaggggttgatccttactcccgcagagggatctgggatctg
ctactaaaataccgcaaagaccggaccatcatcctgtccacccactacatggacgaggcg
gagctgctaggtgaccgtatcgccatcatctcccaggggaagctttgctgctgtggctca
ccgctcttcctgaaatcccgccttggatctggctactacctcactgtggtgaagagggag
ggactggacaccagcactcccagcagtaccagtatctgcaccagcatcagcaccaacaag
ctgcctcctctcaaggacagtgagtcatccatgagtgaagacaccggcctgggaagtgag
gagagcagctcatacctggcggcattgctcaccttggcacagcaacacatcccaggtgcg
aggctggtggaggagtcagggcgcgaggcggtggtcaacttgccgcagaaggctgccaag
gacagcagcctgggcgtcttcctggcagaactggatcagaggctgacagagctgggcatc
agcagctatggcctgtcggacagcgcactagaggagatctttctgcgagtggcagaggaa
accggcgttgatgctgaaccagagctgcaggctgaatctccccagcagccctcagctggg
cagagggctcagagacaaaatgctgaagaaccagagacagcaaggaaaaggcctcgtaaa
caagaacctcaggagacagacttgctgagtggagatggccgaggtggggtccctctgacc
ggctggtggctgacgtggcagcagctgagagctctcttcgtcaaacgctggctttatgcc
cgaaggagccgcagaggcttcttcgctcagattgtcctgcctgctatgttcgtgttggtc
gctctgctcttcagcctcatcgttcctccatttgggaagtatcccgccctgcagctgcag
ccctggatgtacggagaacagtacaccttcttcagcaacgacgcacctgggaacccggcc
atggaaaacctgctggaagctctgctggacaagccagggtttggtaccaagtgcatggac
aaagaggaggaagacaacagcacgagtcctcagtgtgaaggcgagcggagtggcctgttc
atgcgaccacaggtctcctactccacctggcagatgtttagcagaggcaactggagcaga
gacacaccgtctcctgactgtctgtgtagcacagaggacatccgcaggatgctccccgac
tgcccgcagggtgccggtggactgccgcctccacagattaagaggctgaccggagacatc
ctccaaaatctgacaagttataacatctctgattacctggtgaaaacctactctcagatc
ctcaagaaaagcctaaaaaccaagaagtgggtgaatgaattcagatacggaggtttctcc
cttgggggcagcgcaacccagactttatctcaggtccaccatgtcgaagactcgatcgca
gcgatcaggactcgttatcaagttgcacagaacagttcactggatcacctgctaatcaga
ctgccagattttctgggaggactgaacagtcaacacaatgtcaaggtgtggtttaataac
aaaggatggcatgccatggtgtcatttgtcaatgtgatgaacaatggcctgctcagagct
agtctgccaccaggtccagagaggagaaaacacggcatcaccgcctacaaccacccgctc
aacctcaccaaggagcagctcacagaaatggctatgatgaccacatcagtggatgttctg
gtttccatctgcgtgatctttgccatgtcctttgtgccggccagctttgtcctttttctg
attgaggagcgagtcagcaaagccaagcaccttcagtttgtcagcggggtcaaaccgatc
ctctactggctggccaacttcacatgggacatgttgaactacaccgtcccagccaccatg
gtggtgctgatcttcatctgtttccagcagcagtcatatgtctcggagaccaacctacct
gctctcgtcctgctcctcctgttctacgggtggtccatcacccctctgatgtacccagca
tcctttgtgttcaccgtccccagcacagcctatgtggtcctgacttccatcaaccttttc
attggaatcaacggcagcatcgccaccttcgtcctggagctgtttgttgatgagcatctg
aatgaggtcaacaggatcctgaagaaggtgtttctcatcttccctcatttctgcctagga
cggggactcatcgacatggccaaaaatcaggccatggcagacgctttccagagactgggc
acgaagcagactctggaccctcttcagtgggactttgtggggaagaacctgtttgcaatg
gcagctcaaggtgttgtcttcttcatcttcaccatactgctgcagtacaagttcttcata
cacttcaggccgtggtggtccgagcctcagatgcctcctcttggtccagaggatgaggac
gtcgccagggagagagagagggtcataagtggcaaagcccaatcagacatcctcaccctg
atcgacctcagcaaggtttataaagcaggcaggaagccagcggtggatcgtctctgcctt
gggattccccgtggcgagtgtttcggcctgctaggggtgaacggagcagggaagacctcg
acctttcgcatgctgaccggagacacggacgtcacctatggagaggctttccttaatcac
cacagtgtgctgacggagatggagcgggtccaccagctgatgggttactgtccccagttt
gacgccatcagcgacttgctgacgggccgggaacatctggagctgtacgcccgcctgcgg
ggagtacaagaggagtctgttgccaaggtggcacagtggggggtgaagaagctgggactg
acccagtacgctgagcgggaggctggaggctacagcggaggcaacaagagaaaactctcc
actgccatctccctcatcggggctccacctgttatattcctggatgagcccaccactggc
atggacccaaaagccaaaaggtttctgtggaactgcatcctcagcatcaccaaagaggga
agagctgtagttctcacctcccacagtatggaggaatgcgaggctctctgcaccagaatg
gctatcatggtcaatggcagattccagtgtctcggatctgtacaacacctgaagaacagg
tttggtgatggctacaccatcatcctccgtctggcggacgctaaatctgacccggactca
tgccccatcagcacctacatgaagagctctttccccagcattgagctgaaggagcgccac
cagagcgtgctgcagtaccagctgccctcacacgcctgctgcctggctcgtgtcttcgat
gtgctggccaacaactacgaggagctgggcatcatcgacttctctgtttcacaaaccacc
ctggaccaggtgtttgtcaactttgccaaagagcagacagatgacgacctcctcacagat
gtggttgtcagcaacacaacagtacagaccaacctgactgcactgtccaccaggattaac
cctcccactatccaaccacagccaccagtcacacctcctcggacaagcaagactccacag
aagcaggggaaaccatctgacagcaaacccaaagagggtaaatcaaaaaagccaaaggct
ggcaaggtcaaatccaaagaaggcaaagctaatggagagaaaagcagcggtacggcgatg
accagaatacctcagagagaggagaaggctcagaggaagagccaaaggggcagcagtgga
tcggacagcagtaatggtggagttcagggagaatccagtaaacccagtgggtccaaacac
aaagcagagagctccagtaaaagtccctctgcactctttatagtcgacagcaacacacag
gacagggcactgtga
DBGET
integrated database retrieval system
