Epinephelus lanceolatus (giant grouper): 117254072
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Entry
117254072 CDS
T07331
Symbol
fip1l1a
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117254072 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117254072 (fip1l1a)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117254072 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117254072
NCBI-ProteinID:
XP_033477936
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Position
5:complement(42183027..42216268)
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AA seq
374 aa
AA seq
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MYSSDSDSPAVCDEDEEGKLYQLVFELGTSNNKDEGKEEVQIPSSSENSPEYQETDDERM
YAVDSSNPVECSTVDNTYGHDTDALDNNQAVPVRKEKPWRKPGADITDYFNYGFDEKSWN
TYCKKHAKARAARKKIYTKIKVLTEMSFEEDLSTSHHLPSSSNFSSPFAYIAPPPFLYRP
GTPASSSAFASSNSQHSKGFDEPSTSQRRSSSGASSLIPRGMASNAGVINTAKAWECYIW
QEKCDTARDGSRDREHSLDEDSHRSRDRDRERRSSTHSGEEQTRHRDTTERGHKHHSLAR
SSGEKKDKRHRERRHGDNNEGGXKSSRSRKERKNGGEEGESQSRKKRKRARKKRKEKETN
KMSSADHERKLKSD
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtattcatcggactcggactccccagctgtctgtgacgaggatgaagagggaaaactt
tatcaattggtttttgaattgggcaccagtaataacaaggatgagggaaaggaggaggtt
caaatcccatccagctctgagaactcacctgagtatcaggaaactgatgatgaaaggatg
tatgcagttgacagctctaatcctgtcgaatgttcaacggttgataatacatatggacat
gacactgatgcattggacaataaccaagcagtcccagtacggaaggaaaagccatggagg
aaacctggtgctgacatcacagattactttaactatggttttgatgaaaaaagctggaac
acctactgcaagaaacacgccaaagcccgagcagcaaggaaaaaaatatacactaaaatc
aaggtgttaactgagatgtcattcgaggaggatttatccacttctcatcatctgccctct
tcatccaacttcagttctccctttgcatatatcgctccaccacctttcctttaccgacca
ggaacccctgcttcttcctccgcttttgcttcttcgaacagtcaacactctaaaggcttt
gatgaaccctcaacttcacagcgcaggtcatcatcaggtgcatcatccttaatcccaaga
ggtatggcctccaacgctggagtgattaacaccgccaaggcttgggaatgctacatatgg
caggaaaagtgtgacacggccagagacggatccagagacagagagcacagccttgatgaa
gacagtcatagaagcagagacagagacagggagaggcgttcttctacacacagcggggag
gagcaaacaaggcacagggacacaacggagcgagggcacaaacaccacagtttggccaga
tccagtggagagaaaaaagacaaacggcacagagagaggaggcacggagacaacaacgaa
ggagggtaaaaatcatcacgcagcagaaaggaaaggaagaatggtggtgaggaaggagag
agtcagagtagaaagaaaaggaaaagggccaggaaaaagaggaaggaaaaggagaccaac
aagatgtcctctgctgaccatgagaggaaattaaagtctgactga
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