Epinephelus lanceolatus (giant grouper): 117254074
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Entry
117254074 CDS
T07331
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ely03009
]
117254074 (wdr18)
Ribosome biogenesis [BR:
ely03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
117254074 (wdr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_alt
WD40
WD40_Prp19
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
WDR55
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_VPS8
WDR54
Ge1_WD40
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
117254074
NCBI-ProteinID:
XP_033477938
LinkDB
All DBs
Position
5:42462151..42493734
Genome browser
AA seq
444 aa
AA seq
DB search
MAAPLEVIVSSDSGSQMWNSTVFDLHSGSSLLSYRGGNSSARTLSVLGGEYLLSAQLGKN
FINVWEIQRKDQLQQKVVCPGVVTCLTASPNGLFLAAGVAEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGGKDNLALVWSLSSFIRQRNFEADEDQTGPLTIQTLTGVPVR
QNVGHDASVTSRVWSMTRFRSSYLKYCVFVHLSFQVWELSSGELLLSVLFDVEIMSVTFD
PCEYFLFCGGSDGNIFQVSLCSQSLSQDKAFQSDSEGNQVFKGHRNLVTCLSVSIDGMLL
LSGSHDETVRLWDIQSKQSIRCLAHKGPVTNAVIMAAPANMFLPDSRPAVPLPRFSRHLH
ASEGGESGEVCVRLGRYTQEEEETYLQKADRLNSLMNAVTDKSVFGDGENTKVRVAELEE
EVQTLKKVNKDLYDFSSQLLTKPT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctctggaggtgatagtgagtagtgactccggctctcagatgtggaacagc
accgtgttcgacctgcacagcggctccagcctgctgtcctaccggggagggaacagctct
gcccggacactgagcgtcctcggcggggagtacctgctgtccgcccagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaaggtggtgtgtcca
ggtgtggtcacttgtctgaccgcatcacctaacggactcttcctcgctgctggagtcgct
gaggctgtttacctgtgggaggtgtccacaggtaagctgctgtctgtcctcagtcgtcac
tatcaggatgtcacctgtctgaagttcacagacgacagcagccattttgtttctggagga
aaagacaacctggctctggtgtggagtctgtccagtttcataagacagaggaactttgag
gctgacgaggatcagacaggccccctgaccatacagacactgactggcgtacctgtgcgt
cagaatgttggtcatgatgcgtctgtgacatcccgcgtttggtcaatgacacgttttagg
tccagttaccttaaatactgtgtgtttgtccatctgtccttccaggtatgggagctgtcc
tcaggtgagctgctcctgtccgtcctgtttgacgtggagatcatgtctgtgacctttgac
ccctgcgagtacttcctgttctgtggaggcagcgatggaaacattttccaggtgtctctg
tgcagccagagtctcagtcaggataaagcgttccagtccgacagcgaagggaaccaggtc
tttaaaggacacaggaacttggtgacgtgtctctcggtgtcgatagacgggatgctcctc
ctctccgggtcacatgatgaaactgtccgactgtgggacattcagagcaaacagagcatc
cggtgcctcgcccacaaaggtccagtgacgaacgccgtcatcatggcagctcccgctaac
atgttcctgcccgacagtcggcccgccgtccctctgccacgcttcagccgacacctgcat
gcctctgagggcggagaatccggagaggtgtgtgtccgacttggacgctacacacaggag
gaggaggagacttacctgcagaaagctgataggctgaactctctgatgaatgctgtgacc
gacaagtccgtgtttggtgacggcgagaacacgaaggttcgagttgctgagcttgaagag
gaagttcagactctgaagaaggtcaacaaagatctgtatgacttctccagtcagctgctc
accaaacccacataa
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