Epinephelus lanceolatus (giant grouper): 117254120
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Entry
117254120 CDS
T07331
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117254120 (hps3)
Membrane trafficking [BR:
ely04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
117254120 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
117254120
NCBI-ProteinID:
XP_033478025
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All DBs
Position
5:3130328..3150348
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AA seq
1076 aa
AA seq
DB search
MVHVYNCHPFASQQIVQVEQEPGLVCCGGGTLFVVATGGCKVEAYSVEQEGCTFICRFAT
MGNVKSIQHSKIGDYLVTIEEKNSATYLRAYTNWRHQAEGKARVGVRLLGHLLRGASVRS
GVQMEIIEIPLSERPFAVACCPVTGDLLVGCENTLVLFALRRQNQQSLQTQSQQILQSTW
PNSQQSSSQTQGQTSSSNQNFLDFERSVILHLPKIKPKQVALCGAYLAVQAELEVLVLKL
DASSEPNILDESSDTQKHLAADHLEDQADFMVLPRHQELLGDRAKDCDIPVSIEKTGLED
RGQYTLSYVLFRRFTPDFFQGCSVEETQLHSLQLYPLFTSNQSVPLEEPACVFCFFSLPN
AGYLYSLKGGVELLSAYQYPEKVLKAVLTDHLLHVITKSALQCFTVRCAAVAARIEDPYI
DTTMKACPPCSLEVCALRMQLFIGLRSVCVYGRHVILLSTADSETPEEPERITQRRGLEL
KEHTLLTGIFLAVGIDPATTPALESLLSRPFLSRRWTMSSPKETSSAGQGWNIYVVDTVS
PLTLYQEMVEYSQRYAETNPQAQSLRHLLSEAHLLLRASLLQTPEQQPKVEGETDTDRPA
EKQTVVQTDRQELEEALRENCAQLGDCFSRSSQKDCHLALPYYRMSGLSVTEIITRNRPH
PSSPHSYGPGFLFYLKHFLLEEAEQILSQEAADEVINIFSQSEPSQLVSVCASPSMINVS
PAQTLQILQHLEDSAGVSVPLTVTMATMMLCLDDLPQYTQLMERHAEMLLVYGFIEEPRL
LLHGAGGGQHTHIRPTALTRQLAKSQPGLLVAAMVALHENNKVQLEQADHIFKELGCGNC
LQVDFWEAMLMASSQDAVIQELLFRLASVYIDRLANTKSDTYSNQPHTPSRRKSLKSADD
LINSCSHYGALYPWLTVLNPAHNTSSQHQEALYKLQSLLCGPSLSVGSVVPLMERLSEET
LWGFSLHLLCATRRGQYNSSIEKLLDRCPQAIIAYANHQLQDKHMALWWQKLLPELCNRT
RAATDNSILLAALKETLVVVAMETSPTEFLELIPDDGTASYFLPHLLTCSQRHLLA
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgccatcctttcgcctcacagcagatagtacaggtggagcag
gagcctggactggtctgctgtggaggtggaacgctttttgtggtcgctactggaggatgc
aaggtggaggcctacagtgtggagcaggagggctgcactttcatctgtcgctttgccacc
atgggcaatgtgaagagcatccagcacagcaagataggagattacctggtgaccattgag
gaaaagaacagcgccacctacctgagagcctacaccaactggcgccaccaggcggaggga
aaagcccgtgtcggcgtgcgtctgttgggtcacctgctgcgtggggcatccgtgcggagt
ggagtgcagatggagatcattgagatccccctatcagaacgtccttttgctgtggcgtgt
tgcccagtaactggagaccttctggttggctgtgagaacactctggttctgttcgctttg
aggaggcagaaccagcagagtctgcagactcagagtcagcagatccttcagagcacctgg
ccgaactctcagcagagctccagtcagactcaaggtcagacctcgagttcaaaccagaat
ttcctggattttgaacgctcagttatcctgcatcttccaaagatcaagcctaaacaggtg
gcgctgtgtggagcatatttagccgtgcaggcagagctggaggtgctggttctgaaactg
gatgcatcctctgaaccaaacatcctggatgaatcatcggacacacagaaacatctggca
gcagatcatctagaggaccaggcagacttcatggtgcttccgagacaccaggagctgctc
ggcgatcgagccaaagactgcgacatccctgtcagcattgaaaagaccgggcttgaggac
agaggacagtacacgctgtcatatgttctcttcaggcgttttactccagacttcttccag
ggctgcagcgttgaggagactcaactccactccctacagctttacccacttttcaccagt
aaccagtcagtgcctctggaagaacctgcatgtgtgttctgctttttctctctccccaac
gccggctacctgtacagtttgaagggtggtgtggagcttctctcagcctatcagtatcca
gagaaggtcctgaaggcggtgctaacagaccacctgctgcatgtcataacaaagagtgca
ttacagtgtttcacagtgcgctgtgcagcagtagcagccaggatagaagacccctacatc
gataccaccatgaaggcctgtccaccctgcagcctggaggtgtgtgcgctcaggatgcag
ttgttcattggtctgcgctcggtgtgtgtttatggccgtcatgttatcttgctctccacc
gctgactcagagacaccagaggagcctgaacgcatcacacaacgcagaggcctcgagttg
aaagaacacaccttgctgactggtattttcctggcggtgggaatcgatcccgcaaccaca
ccagctctggagagccttctatcacggcccttcctgagcagaaggtggacaatgtcttct
cccaaagaaaccagctcagccggacaaggatggaacatctatgtggtcgacactgtctcc
cccctcactctctaccaagaaatggtggaatacagccagcggtatgcagagaccaacccg
caggcccaaagccttcggcacctcctcagtgaggctcacctccttctccgcgcctcctta
ctccaaacacctgagcagcaaccaaaagtggagggtgagacagatacagacagaccagct
gagaaacagacagttgtacagacagacaggcaagagctggaggaggcactcagggagaac
tgtgcacagctgggagactgtttcagcaggagcagtcagaaggactgccacctggctctg
ccgtactacaggatgtctggtctgtcagtcacagagatcataaccaggaatcgtccgcat
cccagcagccctcactcctacggccccggcttcctgttctacctgaagcatttcctgtta
gaagaagcagagcagatcctcagtcaggaagcagctgatgaggtcataaacattttcagc
caatcagagccctcacagctcgtcagcgtgtgtgccagcccgtccatgataaacgtcagc
cctgcacagacactgcaaatcttacaacatctggaggactctgccggcgtgtcagtccct
ctgacagtcaccatggcaaccatgatgctgtgtttggacgacctgccacagtacacacag
ctgatggaaagacacgcagagatgctgctggtgtacgggttcattgaggagccgaggctg
ttgctgcatggcgcaggtggaggtcagcacacacacatccgtcccacagcattgacacgc
cagttggcaaagtcccaaccaggactgctggtggccgccatggtggctttacatgaaaac
aacaaagttcagctggaacaggctgatcacatattcaaggagctgggctgtgggaattgc
ttacaggtggatttctgggaggcgatgctcatggcttcctcacaggacgctgtcatccag
gaacttctgttccgtctggcgtctgtctacatcgaccgactggccaacaccaaatcagac
acatactccaaccaaccacacacaccctcaagacgcaagtcgctgaagagtgctgacgat
ctgataaactcatgctctcattatggtgctctgtacccatggctcactgttctcaatcca
gctcacaataccagctcccaacaccaggaagcgctgtacaaactgcagtctctcctgtgt
ggtccgtccctgtctgtgggctccgtcgtgcccctgatggagcgtctgtcagaggaaacc
ttgtggggcttcagcctgcacctcctctgtgcaaccagaagggggcagtacaacagcagc
attgaaaagctgctggatcgctgtcctcaggccatcatagcctacgccaaccaccagtta
caagacaaacatatggcgttgtggtggcagaagctgctcccagagctgtgcaacaggacg
agagctgcgacagataacagcattttactggctgctctcaaagagacgctggttgtggtt
gccatggagacaagccccacagagttcctggagctgatacctgacgatggcaccgcctca
tactttctgccacacctgttgacatgtagccagagacacctactggcctga
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