Epinephelus lanceolatus (giant grouper): 117254232
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Entry
117254232 CDS
T07331
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03030
DNA replication
ely03410
Base excision repair
ely03420
Nucleotide excision repair
ely03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117254232 (rfc4)
03410 Base excision repair
117254232 (rfc4)
03420 Nucleotide excision repair
117254232 (rfc4)
03430 Mismatch repair
117254232 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ely03032
]
117254232 (rfc4)
03036 Chromosome and associated proteins [BR:
ely03036
]
117254232 (rfc4)
03400 DNA repair and recombination proteins [BR:
ely03400
]
117254232 (rfc4)
DNA replication proteins [BR:
ely03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117254232 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
117254232 (rfc4)
Chromosome and associated proteins [BR:
ely03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117254232 (rfc4)
DNA repair and recombination proteins [BR:
ely03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117254232 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
117254232 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
DUF815
KH_DUF2096_C
Mg_chelatase
SLFN-g3_helicase
AAA_24
Gp44_lid
AAA_19
AAA_14
RuvB_N
AAA_5
ResIII
DNAX_ATPase_lid
Cdc6_lid
Kinesin
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
117254232
NCBI-ProteinID:
XP_033478248
LinkDB
All DBs
Position
5:complement(3562658..3591220)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQSTRPQKDKATAGPCTEKKAKAIPWVEKYRPKCVDEVAFQEEVVAVLKKC
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPQLYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESIAALVRVSEGDLRKAITFL
QSAARLNVDKEITEHAVTEIAGVIPAKMIDNLIQICFTGTFEKLEVAVRNMVDEGYAATQ
ILSQIHESIIEQDLSDKQKSAITEKMAVVSKCLSDGANEYLQMLSLCSVIMQEASQHN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttttgaaaggagcgactgttcagtctaccagacctcaaaaagacaaggca
acagcagggccctgcacagagaagaaagccaaggctattccctgggtagaaaaatacagg
ccaaagtgtgtcgacgaggtggcctttcaggaggaggtggtagcagtgctgaagaagtgt
ttggaaggagcagatcttcccaatttgctcttctatggccctcctggaacaggaaagacc
tccaccatcttagccgctgccagagaactttatggcccacagctgtacagacagagagtg
ctggagctcaatgcctcagacgaacgaggcatccaggtgatcagagagaaggtcaaaaac
tttgctcagctcactgtggccgggactcgcccagatgggaagccgtgtcctccttttaag
atcataatcctggatgaggcagactccatgacagcaccagctcaggccgctctcaggcgg
accatggagaaagagtcccgcactacccgcttctgcctcatctgtaactacatcagcagg
attattgagcctctgacgtccaggtgttccaaatttcgtttcaaacctctagccaatcag
attcaagaagagcggttgctggaaatctgtgagaaggagaacctcaagtacaccaaggag
agtatagcagcactggtgagggtgtctgagggagacctgcggaaagccataaccttcctc
cagagtgctgcacgtcttaacgtggacaaggagatcacagaacatgctgtgactgaaata
gccggggtcatccctgccaagatgattgacaacttgatccagatctgtttcacaggaaca
tttgagaaactagaggttgctgtgaggaacatggtggatgaaggctatgcagccacacag
atcctgagtcagattcatgagtctatcatagaacaggacctgagtgacaagcagaagtca
gccattacagagaagatggcggttgtgagtaagtgcctgtcagacggtgcaaatgaatac
ctgcagatgttgagtctgtgttcggtcatcatgcaggaggcctcccagcacaattaa
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integrated database retrieval system
