Epinephelus lanceolatus (giant grouper): 117254242
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Entry
117254242 CDS
T07331
Symbol
rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ely04121
]
117254242 (rnf13)
Enzymes [BR:
ely01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117254242 (rnf13)
Ubiquitin system [BR:
ely04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117254242 (rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf_RING_Vps8
zf-RING_16
Prok-RING_4
zf_RING_Vps8_fungal
DUF7027
FeoB_associated
Glucos_trans_II
zf-RING_4
PHDvar_NSD
RINGv
PHD
zf-RING-like
Neur_chan_memb
Hemotin
zf-C3H2C3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
117254242
NCBI-ProteinID:
XP_033478263
LinkDB
All DBs
Position
5:complement(23919354..23987355)
Genome browser
AA seq
382 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADIAAYSFDNKTEAFEDLPARFGYRLP
SDGLKGFLIGARPENACEPIEPPPRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKAAIV
HNVDSNDLISMGSNDLDVMKQIDIPSVFVSEETANSLKEDFTYDKGGHVVLMPDFSLPLE
YYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGDNYDVCA
ICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKVVPSHGDSDSDSDEGES
GPDENEEASESTPLLRSLASTSAHSFGTMSGASRSEQDQESSDYEDDELDSSDSEEEVTV
ETVVVQMQQPCSEGHEHDLPRA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtccctgggaatgctgatgctgtcggccacgcagatttacaccatcttcact
gttcagctctttgccttcctcaacctgctgcccgtggaggctgacattgccgcatactca
ttcgacaacaaaacagaggccttcgaggacctgcctgcacggtttggttatcggctaccc
agcgatggactgaagggcttcctgattggggcacggccagaaaatgcctgcgagcccatc
gagccccctccgagggacaacctgacgggcgctttcatcgtcctcatcaagcgcttcgac
tgcaactttgacatcaaggtcctcaatgcccagaaagccgggtacaaggcagccattgtt
cacaatgtggactccaatgacttaatcagcatgggatccaatgatttggatgtcatgaag
cagatagatatcccctctgtgtttgtgagcgaggaaactgccaactctctgaaagaagac
ttcacgtatgacaaggggggacacgtggtcctcatgccagacttcagcctgccgctggaa
tactacctgatccccttcctcatcatcgtgggaatctgcctcatcctcattgttgttttc
atgattacaaagtttgttcaggatcgacaccgggctcggaggagccgtctgcgcaaagat
cagctgaagaaacttcccatccacaagtacaagaaaggggacaactatgatgtgtgcgcc
atctgcctggacgaatatgaagaaggtgacaaactccgagtccttccgtgttctcatgcc
taccacagtaagtgtgtggacccctggctgaccaaaactaagaagacctgtccggtgtgc
aagcagaaagtggtaccctcgcacggcgactccgactccgactcggatgaaggggagagc
ggccccgacgagaacgaggaggcgtcggagagcaccccactgctgcgctccctggcctcc
accagcgcccactcctttggcaccatgtcaggagcgtcgcgctcggagcaggaccaggag
tcctccgactacgaggacgacgagctggacagcagcgacagcgaggaggaggtcaccgtg
gagactgtggtggtgcagatgcagcagccctgctctgaaggccacgagcacgacctgccc
cgagcttga
DBGET
integrated database retrieval system
