Epinephelus lanceolatus (giant grouper): 117254474
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Entry
117254474 CDS
T07331
Symbol
nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117254474 (nwd1)
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
117254474 (nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
NACHT
WD40_MABP1-WDR62_2nd
AAA_16
DUF4062
NBCH_WD40
Beta-prop_EML
NPHP3_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
AAA_22
Beta-prop_SCAP
Beta-prop_WDR75_1st
APAF1_C
WD40_like
AAA_35
Beta-prop_WDR75_2nd
Viral_helicase1
Beta-prop_LRRK2
Bac_DnaA
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
117254474
NCBI-ProteinID:
XP_033478705
LinkDB
All DBs
Position
5:43866974..43890250
Genome browser
AA seq
1639 aa
AA seq
DB search
MAERPAAAGGRDVTLQDILRGWTDGAQKMRSSSNMIRVFISSTFTDMSSERKALLEKAYP
EVLAFCRSLGLVFEVLDLRWGIRGISSGDHEACDVFLQEINTCQRISAGPAFVALLGNRY
GHRTLPRLVPEKQFEVLLSKISKNPEGVKQLNQWFLKDNNAVPPTYVLQPITAHFPHYSD
LRPESGPQRDNNLLSWRFTETQLLQLLRAAATDAEAAGDVTAEQKQHFFTSVTEREFEQG
LWKGGSETSALLFVREVPRQRVRDGPKRLAKYMDLTADGLLDAEAQGLLTGLKSRLYATL
QNILNLHCVELSKGSIDPKRKEHAQYLDSVCEQFILQMKARIEAAVDSPVEGRRRKIWGS
IEEEKEEISDRVVEEVEQHTAMSMELCRGVCGREGLLGKLCCAMWESTNVHHGPLVVHGA
AGMGKTALLCKLAQEMRSVLEARAAVVIRLLSARHPHIPDIDHVLRSVCLQICLACGLAP
PSPLTANTHLELLRFFRNVLAEVSQQGNTLLIILDALDQLSDQHHAHKLRWLPADLPPNI
HLVVSMDTNSEAFANMRLKLRTLGSFFEVERLSRDEGRQILESYLRASERTLTPEQSTAA
LQSFESTGCPLHLKLILSAAKRWTSFTPLTATHLSASTQEMMSQLFLMLEEKHGKELVGG
ALGYMTLARDGLLEAELRDIMSLDDDVIAEVYRYSLPPTPSLIRLPPLLWAQLRRDLEDQ
LEERWMGGVATIALNNRRLCEAVSTWYLTSERRGRSLRILAEYFLGRWSGKLKPVALPGL
TLLLSDRKVPPQPLWFAPGLANIRKLQELPYHLLHAGLWDELRQEVIGSAEWLYCKSRVC
GVSSVIQDLDQCSQYMDCTETRLIRDTLVLIKPSLDFLDGHMDTSLFYTELLARLCSLAT
PFPSVIGRLCSQCEEWLLTCPEPILVPKCSFLQQPGGALQHTLTGLQGGVLCVDVSVETE
LLVAGSDDGAMAVWSLADQQLLHSLLGHTGAVLSVKLVDSSAHCLSLAADGSLRRWSLTN
GQQLLCIQEAVPIDSAPSSVHLHLSDQLIFVYTRTQVKVLKLDGAELLSSSSDDDDDDKG
SVVLGVLGESVVCLCDSGLVRISHPVNGTQTVETSQRRLTLVNSVVLQQRGKVFVVSREG
FLHQISRTGRQTAVEFPLVPSLLSVTEDEKILIAGSDRTLSLFNIDRDSVDGFLDLQHDD
SVLSACVSSDCRLLASGAADQLIRIWSMTTGSLLDTLCGSDSPVTSVFLYNGFVISASTA
AACVHMWSLKYDTCHKPTAHVPAGCAHIAVTKDADCVFYVRQQSQTEVISWNNNTGSLSE
RLAVSAEVCCLELAQHKRLLLCGLTTGTVLIYPLALPQETLCIPPPESLSRVLCLAVSSQ
EKHVAVAYEDSVCLFEISTRDSFPTVEGPLEGFPLSLLHAPLSSMALLSDRRLLYGTSCG
EVKLHDFSSGSSSDLEPHRSRVTCVTASNWGTHALVGSEDTVQRLWALSPLVLDHTIEYK
GFFFEGVLSAAFSDSDQFVFTGSQDRTVKVWDVATGNLLYVQYVYSPVVRMVTYRNGFVA
LSQHGSVIREVFRCPDHISPDYNPLRNVKAQYRVTSRDKKNQDGQQSSGSDLQDYNPAQF
NLNLMNMLRTKPSSTCLIL
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgtccagcagcagcaggaggacgagatgtcaccctgcaggacatcctgaga
ggatggacagatggagcccagaagatgaggagcagctccaacatgatccgagtgttcatc
agctccacgttcacagatatgagcagcgagaggaaagcgctgctggaaaaagcttaccca
gaagtccttgctttctgtcgcagtctggggctcgtgtttgaggtgttggatctgcgttgg
ggaattcgtggcatctcgtctggagaccacgaggcctgtgacgtcttcctgcaggagatc
aacacctgtcagaggatttcagctggtcctgcgtttgtggctttgctggggaacaggtat
ggacaccgaactcttcctcgcctcgtccccgagaagcagttcgaagtccttttgtccaaa
atctccaaaaaccccgaaggcgtcaagcagctgaatcagtggttcttaaaagacaacaat
gcagtcccgcccacctacgtgcttcagccaatcacggctcacttcccccactacagtgac
ctccgacctgagagcggcccgcagcgtgacaacaacctcctttcctggcgtttcacagag
actcaactgttgcaactcctacgtgctgccgccacggacgccgaggcagctggtgacgtc
acagcagagcagaaacaacacttcttcacatcagtcacagagcgagagttcgagcagggt
ttgtggaagggcggcagtgaaacgtcggctctgctcttcgtccgagaggttccccgccag
agagtgagggacggccccaaacgtctcgctaagtacatggacctgactgccgacggtctg
ctggacgcagaagctcagggactcctcacaggtctcaagtcccgcctctacgcgacgctg
cagaatatcctcaacctgcactgcgtggagctcagcaaaggaagcatcgaccccaaacgc
aaagagcacgctcagtacttggacagcgtctgcgagcagttcatcttacagatgaaggcc
aggattgaagcggcggtggattcgccagtggaggggaggcgcaggaagatttggggaagc
attgaggaagagaaggaggaaatctcagaccgggtggttgaggaggttgaacagcacact
gccatgagcatggagctgtgcagaggtgtctgtgggagggagggccttctgggtaagctc
tgctgcgccatgtgggagtccaccaacgtccaccacggcccgctggtggtacacggggct
gctgggatggggaagacggccctgctgtgcaaactggcacaggagatgcgtagtgtcctg
gaggccagggcggcggtggtgatcaggctgctgtcagctcgtcatcctcatatacccgac
atcgaccacgtcctccgtagcgtctgccttcagatctgtttggcttgtggtttggctccg
ccctcaccactaacagccaacactcacctggagcttctccggttcttcaggaacgtcctc
gctgaggtgtcccagcaggggaacactctgctcatcatcctggatgctctggatcagctc
tcagaccagcatcatgctcacaaactccgctggctgcccgctgacctcccacctaacatc
cacctggtggtttccatggacaccaacagtgaggcgttcgctaacatgcggctgaagttg
aggactttggggagtttctttgaagtggagcgtttgtctcgtgatgaaggacgacagatc
ctggagtcgtacctgcgagcatctgaacgaactttgacccctgagcagagcaccgctgcg
ctgcagagctttgaatcaaccggttgtcctctgcacctcaaactgatcctgtctgcagcc
aaacgctggacgtccttcaccccgctcacagcgacacacctgagcgcaagcacacaggaa
atgatgtcacagctcttcctgatgctggaggagaaacatgggaaggagctggtgggcggg
gccttaggatacatgactctggcaagggatggtctgctggaggctgaactgcgtgatatc
atgtccctggacgatgatgtcattgctgaggtgtacaggtactccctccctccaaccccc
tcgctgatccggctgccccccctcctctgggctcaacttagacgggaccttgaggatcag
ctggaggagcgctggatgggcggggtcgccaccatcgccttaaacaaccggcgtctgtgc
gaggcggtctcgacttggtatttgacatcagagcggcgggggcggagcctcaggatcctg
gcggagtacttcctaggtcggtggtcggggaaactgaagccagtggctctgccgggcctg
acgctgctgctttctgacagaaaggtcccgccccagccgctgtggtttgctccaggattg
gctaacatcaggaagctccaggagctgccgtatcacctgctgcacgctggtctgtgggac
gagctgcgacaggaagtcatcggcagtgcggagtggctgtactgtaagagcagggtgtgt
ggggtgtccagtgtgatccaggacctggaccagtgctcccagtacatggactgcactgag
accagactgatccgagacacactggtcctgataaaacccagtctggacttcctggacgga
cacatggacacgtctctgttttacactgagctgctggccagactctgctccttggccacg
cctttcccctctgtgattggccggctgtgtagccagtgtgaggagtggttactgacgtgt
cccgagcccatcctcgttcccaagtgcagtttcctgcagcagccagggggggcgctacag
cacacgctgactggactgcagggaggtgtgctgtgtgtggacgtcagtgtggagacggag
cttctggttgcgggttcagatgatggcgcgatggcggtctggagcctcgctgaccagcag
ctcctacactcactgctgggacacaccggtgcagttctgtcagtcaaactggtggacagc
tccgcccactgcctctcattggctgctgatggctctctgaggaggtggagcctgacaaac
ggccaacagctgctctgcatccaggaggcggtgcccatcgactccgccccttcctcagta
cacctccacctgtctgatcagctgatctttgtttacaccaggacacaggtgaaggtgttg
aagctggacggagccgagctcctcagcagcagcagtgatgatgatgatgatgataaaggc
tcggtggttctgggagttctgggagaatctgtcgtgtgtctgtgtgattctggtctggtc
agaatatctcatcctgttaatgggactcaaactgtggaaacctcacagagacgtttgacg
ctggtgaattctgttgtgttacaacaacgtgggaaagtgtttgtggtttctagagaagga
tttctccatcagatttccaggacgggcagacagacagccgtcgagtttcctctggttccc
tcgttgctctcagtcactgaagatgaaaaaatactgatagcaggaagtgatcggactctg
agcctctttaacatcgacagagactctgtggacggattcctcgacctccaacacgacgac
agtgttttgtccgcctgcgtctcatcagactgccgactgctggcctctggagctgctgac
caactcatacgaatctggtcgatgaccaccggttcgttgttggacactctgtgtggttca
gactctcccgtcacatctgtctttctgtataacggctttgtgatttcggcctcgacggca
gctgcctgcgtccatatgtggagtctgaaatacgacacttgtcacaaacccaccgcccac
gtccccgcgggctgtgcccacatcgccgtcactaaagacgcggactgtgttttctacgtc
cgacagcagagccagacggaggtcatcagctggaacaacaacacaggttctctgtcggag
cgtctggcggtctctgctgaggtctgttgtctggagttagctcagcacaaacggctgctg
ctctgcggtctgaccaccggcaccgtcctcatctacccgttagctctgccccaggagaca
ctctgcatcccccctccagagagcctctccagggtgctctgcctggctgtcagctcccag
gagaagcacgtggcggtggcctacgaggactctgtgtgtttgtttgagatcagcaccaga
gacagcttccccacggtggagggacctctggaggggttccccttgtccctcctccacgcc
ccgctgtcctccatggccctgctgtctgaccgcaggctgctgtatgggacaagctgtggg
gaggtgaagctgcacgacttcagcagcggcagcagctccgacctggagcctcatcgcagc
agagtgacctgtgtgacggccagtaactgggggacccacgccctggtgggctccgaggac
accgtccagaggctgtgggccctgagcccactggtcctggaccacaccattgagtacaag
ggttttttcttcgagggcgtcctctccgctgctttctctgacagcgaccagttcgtcttc
actggatctcaggacagaaccgtcaaagtgtgggacgtcgctacaggaaacctgctgtac
gttcagtacgtctactctcccgtcgtcaggatggtgacctataggaacggctttgtggcg
ctgtctcagcacggctccgtcatcagggaggtctttcgctgcccggaccacatcagtcca
gactacaaccctctgaggaacgtcaaggcccagtaccgggtcacctccagggacaagaag
aaccaggacggccagcagagctccggctccgacctccaggactacaacccggcccagttc
aacctgaacctgatgaacatgctcagaaccaaaccctcctccacctgtctcatactgtag
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integrated database retrieval system
