Epinephelus lanceolatus (giant grouper): 117254485
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Entry
117254485 CDS
T07331
Symbol
cilp
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117254485 (cilp)
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117254485 (cilp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
TSP_1
I-set
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
ig
Ig_5
Prok-E2_C
TSP1_spondin
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
117254485
NCBI-ProteinID:
XP_033478725
LinkDB
All DBs
Position
1:39185078..39204667
Genome browser
AA seq
1163 aa
AA seq
DB search
MSVKPLLLLLLGITAATVVTAQGPWRTDNRESGSSLFNSDDNYEWTTWFNVDHPGGRGDY
EQLEAIRFYYRARVCETPRAIEARTTEWVPARETGETVHADPSVGFWCLNEEQGPDRNCS
NYAVRFLCPKDNSVNIQGTWGPWSDWSPCPALCGQVGVQLRSRNCQSRSVPCIGPKVEGK
ACNGAECPIPDCSLQCVTGKVNAECDACMCEDHILLGSVRGAGGLTAEGATILRSGKLLT
LTDHNGHFRIPGVCPDGNTTLTVNLQGHATLSVVVPHSTERTSVLSVQLKRIEKLHVLSN
PESKVRREGQTAAFCCKVAGTPQPDKYQWFHNNSLLEEHSESTLVLKNLRPELTGEYYCR
ASGPSGAIKTKPATLKVLGRDEHSCNPKPESHLIRLPHDCYQNSTDSFYYDVGKCPLSTC
AGKLDNGIRCKDKVAYCCGVKKMEEKQLTCRGYQLPTMVVTECGCQKCVDTKAIVHGRAI
AADNGEPMRFGHVFMNGVRISRTGYKGTFSIQVPPDTERLVLTFVDNMQKFVNTTKVLPF
NPKGGAVYHEIKLLRKKAPVTISPTETNTLELGELEGQESMVQIQIPPNSFYTEKGEVFT
GNVNASVTFLDPRDVSTAAAAQSDLNFVGDEGDTLPLRTYGMFSVDFRGEENNEPLNAGE
VKVFLDSAQVKMSEHLDIMKLWSLNPDTGLWEEEGSLQVEKKKRGKREERTFLIGNMEIR
ERRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPTAGYSTNPRAWGRFD
SVITGSNGACLPAFCDEQKADAYSAYVMANLGGEELEAVSSAPKLNPNLIGVPQPYLGKL
NYRRTDHEDPRVKKTAFSINVAKPSPNTAEESNGPVYAFENLRDCEEAPFSAAHFRFSRV
EGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKIISPHEINVRSRNMGGTH
PKTVGQLYGLRDTRSIRDMDQGTISAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKRDL
VNTMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRCFD
GTSDGTSRVMKSNDGVALTFTCGDHEVTRQSVFQALQTAQGQTLTGVVREGRQNRRRQRA
NAPRSSRRRSTRNPTGKRATATS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaagcctcttcttcttctcctcctgggaatcactgcagccacagttgtcaca
gctcaaggaccatggagaacagacaacagagagtcaggctcgtctctgttcaactctgat
gacaactatgagtggaccacatggttcaatgttgatcaccccggaggccgtggagactac
gagcagctggaggccattcgcttctactaccgtgcccgagtgtgtgagactccacgggca
atcgaagccagaaccactgaatgggtcccagcccgagaaactggggaaacggtccatgca
gacccatctgtgggcttctggtgcctcaatgaggagcagggtcctgaccgcaactgctcc
aactatgcagtccgcttcctctgccccaaagataacagtgtgaacattcagggtacctgg
ggtccatggtcagactggagcccatgccctgccctctgtggtcaggtgggggtccaactg
cgctccagaaactgccagtctcgctctgtgccctgcattgggcctaaagttgaagggaaa
gcatgcaatggagcagagtgcccaataccagattgctccctgcagtgtgtaacggggaag
gtgaatgctgagtgtgacgcctgcatgtgtgaagaccacatcctgctgggttctgtccgt
ggtgccgggggcctcacagctgaaggggctaccatccttcgctcaggcaaactccttact
cttaccgaccacaatgggcatttccgcatccctggggtctgccctgacggcaacaccacc
ctgacggtcaacctgcagggtcatgccacccttagtgttgttgtgccccacagtactgaa
cgtacctctgtcctcagtgtccagctgaaaagaatagagaagcttcacgtgctgagcaac
cccgaaagcaaggtccggagggagggacaaactgctgccttctgctgcaaagtggcagga
acaccccaaccagacaagtaccaatggtttcataacaacagtctcctggaggaacactct
gagagcaccttagtcctaaaaaatctgcgtcctgagctgactggggagtactactgcaga
gcaagtggtccctctggggctatcaagaccaaaccagctacactcaaagtcttaggtaga
gatgagcattcatgtaatcccaaacctgaatcccacctcatccgccttccgcatgactgc
taccaaaacagtacagactccttctactacgatgtgggcaagtgccccttgagcacatgt
gctggaaagctggacaatggcatcaggtgcaaagacaaagtggcttactgctgtggcgtc
aaaaagatggaggagaagcagctgacatgccggggttaccaattgcccaccatggtggtg
actgagtgcggctgccagaaatgtgtggacaccaaggccatcgtgcacggtagggccatt
gctgcagacaatggtgagccgatgaggttcggccacgtctttatgaacggtgtccgaatc
agccgcacaggctacaaaggaacattctctatccaggttcctccagacacagagaggcta
gtcctgacttttgtggacaacatgcagaaattcgtcaacaccacaaaggtactcccattt
aaccccaaaggaggggctgtttaccatgagatcaaactactgagaaagaaagctcctgtg
accattagcccaacagaaaccaacactctggagcttggggagttagagggccaggagtca
atggttcagatccagattcctcccaattccttctatacagaaaaaggagaagtcttcacg
ggtaacgtaaatgccagtgtaacgttccttgaccccagagatgtctccacagctgctgca
gctcaaagtgatctcaactttgtaggagatgaaggagataccctgccgctgagaacctac
gggatgttctcagttgactttaggggtgaggaaaacaatgagcccctgaacgcaggtgaa
gtgaaggtgttcctggactctgcccaggtgaagatgtccgagcacctcgacatcatgaag
ctgtggtcactgaaccctgacactggcctgtgggaggaggagggaagtctgcaggtggag
aagaaaaaaagaggcaaaagggaggagagaacctttctgattggtaacatggagatcaga
gaaagacgtctttttaacctggatgtcccagagaaccgcaggtgttacgtgaaagtgagg
gctttccgcagtgaacgcttcatgcccagtgagcaggtggagggagttgtggtgagtctt
ataaacatggagcccacagctggctactccactaacccacgcgcttggggccgttttgat
agcgtcatcaccggctccaatggtgcctgtcttcctgccttctgcgatgaacaaaaagct
gatgcctactctgcctatgtcatggccaaccttggaggagaggagctggaggctgtgtct
tctgctcccaaactcaatcccaacctcattggagtgccccagccttacctgggtaagctg
aactacaggcggactgaccatgaggaccccagagtgaagaagactgcattcagcatcaat
gtggcaaaaccaagtcccaacacagctgaggaaagcaacggaccagtgtacgcatttgag
aacttgagagactgtgaggaggccccgttcagtgcggcacacttccgcttttcaagagta
gaaggtgaccgctatgattacaacacagtgccgtttaatgaagacgacccaatgagctgg
acagaggactacctgagctggtggcccaagcccatggaataccgggcctgctacattaaa
gtcaaaatcatcagcccacatgagatcaatgttcggtcccgcaacatgggtggcacccac
ccaaagacagtaggccagctgtatggcctccgagacactcgcagcatccgtgacatggac
cagggaactatttcagctgtgtgcctggagttcaagtgcagtgggatgctgtatgatcag
gagcgtgtcgaccgtaccctggtgaaggtgattccacaaggaagctgcaagagagatctc
gtcaacactatgcttcaagagtatctggtcaaccacctgcccttagccgtcaacaacgac
accaacgagttcaccatgctggcacctcttgacccacttggccataactacgggatttac
acagtgacagaccaggatccccgcacagccaaagagatcgcactcggacgttgctttgac
ggcacttctgatgggacatctcgtgtcatgaagagcaatgatggtgtagcgctgactttc
acctgcggagatcatgaggtgacacgccagagcgtcttccaggccctgcagactgctcaa
ggtcaaacattaacgggtgtggtgagagaaggcaggcagaaccgacgccggcagagggcc
aatgcaccccgcagcagccgcagacgcagcaccagaaatccaacaggaaaacgtgcaacg
gccacaagctaa
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