Epinephelus lanceolatus (giant grouper): 117254501
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Entry
117254501 CDS
T07331
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ely04990
]
117254501 (sned1)
Domain-containing proteins not elsewhere classified [BR:
ely04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
117254501 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
SdrD_B
cEGF
EGF_MSP1_1
EGF_Teneurin
DUF7201
Motif
Other DBs
NCBI-GeneID:
117254501
NCBI-ProteinID:
XP_033478752
LinkDB
All DBs
Position
5:38047406..38088157
Genome browser
AA seq
1385 aa
AA seq
DB search
MVLVLRALLPCFCTLLSLDLLPGVELAVPLEDFYPFGQEEGDSQTNAQDDGGSRLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESHEPSILRRASAEVKTYFSEFPDFNATWVLISTWHQVTFFGGNSRTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHATSGGNLAGLGGIAAQAGFNAGDGTRYFNIPSSRTADVVN
VEETTNVGYPGKWVFRIDDAHVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRLCQIDVNECASDPCQNGGTCEDRINSFVCQCPPGYTGPLCETDIDECGDRPC
LNNGLCVQGAGSFTCVCEPGYTGVLCETDINECESQPCLNGGECIDQVANFTCVCPDNFT
GALCETELVELQVNVTEAENQTALCEDDDCKKHQTCEYTSSGIHNCTCAPGFYGDECEEE
CLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNSRPCPDGGPCLEYGGAYLCTCQ
TSGAELDHKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYKCVCPYRFTGKHCEVGKPDPCASSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCETSRSLVQTNAELGCGLPPQVKHAEVQFSSTTPGSMAVYICHSGFTSVPR
ATQSICGIQGDWSQPPICEEINECLSQPCLNGGTCRNQVGSYQCECDVGFSGHRCQTDIN
ECLSDPCKHGGTCEDRPGSYLCHCTQGFKGQDCEIEQDVCDSNPCLNGGVCRGYRRNYLC
VCKDGFFGDQCQMLENPCVLQPCGNRGLCRSDKRGNYNCVCKIGHTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEPSHSLVSGFLVTYGPLGASDHQTDMLDRQQSSHVMRGLVPGL
LYNISTFSIKRNTNNNDNSQPATALIRTRPQPVEQLQVENVSSSQVWLSWLVQAAHHAAV
SRVHVSLLPSDGGETRTAVLNTSTTEYTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHSA
GPLTFWTRPLPPQNLSLSHVTTNSALITWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGKL
GSYTLRELTPGQHYYVALTSVKSTGQEQIHSIPQHLAFATLPMGARSGRRERPAGAGRTL
PLSQPKDQGGTTDTENSEELPRYTELIDRRGKITAKFAHMPRKAIRHRTKPDPPIRLEKM
EETTNKISLALEVQEEGLRTKPELPQDCRSLPCQNGGTCVDEGDSYICDCATGFKGRQCE
LLCQRVPHPCTRLYSETKSVPVWEGGVCHYLYKRTYKVQQDVCYREICEPTPPKKSQSRR
INRQQ
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcttctgcaccctgctctccctggacctg
ctgcctggggtggaactcgccgtgcccctggaggacttctacccctttggccaggaggag
ggggactcccagaccaacgctcaggacgacggaggctccaggctcgtggagatctctgtt
gctttccccttctttggagacaggcacacaggactctatgtgaacaacaatggccttgta
tctttcctgagggaggtgtctcagttcacacctgtggcttttccgatcgccggggacagg
agggttgtggcgccattctgggcggatgtggacaatcgtcgagcagggagagtcttctac
agagagagccacgagccctccatcctgaggagggcctcagctgaagtcaagacgtacttc
tcagagttccccgacttcaacgcaacatgggtcctcatctctacatggcaccaagttact
ttctttggaggcaactctcgcacaccggtaaatactttccaagtggtgcttattacagat
ggagagctttccttcactatattccagtacaataacatcacttggaccacaggcatgcac
gctaccagtggaggaaacctggctgggctgggaggaatcgcagcgcaggcaggtttcaat
gctggcgatggcacgcgttatttcaacatccccagctcgcgcacggccgatgtggtgaac
gttgaggaaaccactaacgtgggctacccgggcaaatgggtcttccgtatagatgatgca
catgtggaagtgggcggctgcaataactccgcatcagtgtgtccacacctgcgaccgtgt
ctgaacggaggccagtgcatcgacgactgcattacaggcaacccctccttcacttgctcc
tgcttggctggcttcactggccgactgtgccagatcgatgtcaatgagtgtgcctcagat
ccttgccagaacggaggaacttgtgaagaccggattaatagtttcgtctgtcaatgtcct
cctggatacactgggcctctgtgtgaaacagacattgacgagtgcggagacagaccgtgc
ctcaacaacgggttgtgtgtacaaggcgccggcagtttcacctgcgtgtgtgaaccgggt
tacactggtgtcctgtgtgagacagacataaatgagtgcgagtcgcagccctgtctgaat
ggaggagagtgcatcgatcaggtggccaacttcacctgtgtctgtcccgataacttcact
ggagcgctctgcgagacagagttggtggagcttcaggtcaatgtaactgaggcagaaaac
caaacagccttgtgtgaagacgacgattgcaagaagcaccagacctgcgaatacaccagc
tctggaatccacaactgcacctgtgctccaggcttctacggtgacgagtgtgaagaggaa
tgtctttgccagaatgggggtgtctgtgtggacatcaatgggacctgtgaatgcccttca
ggctacacaggactctactgtcagtttgaagtaacccagacgccatgcagtaacagcaga
ccgtgtcctgacggcggtccttgtttggagtacggaggagcgtacctgtgtacatgtcag
acgagtggagcagagctggatcataaggacttctacccctatgtacagccccgatcggtc
tgcgactcctctccgtgtctgaatggcggctactgctacgagcgggatggaggctacacc
tgcgaatgcaaatatggatactgggggaagcactgtgaaaaagttagactcaatacctgt
gcttctgggccctgccgcaacggaggctcctgcaaggaagaggcggggagctacaaatgt
gtgtgtccttacagattcactggaaaacactgtgaagtggggaagccagacccctgtgcc
tccagcccctgtctgaatggggggacatgtttccactacataggaaagtacaaatgtgaa
tgtactgaggctttcagcggcaggcactgcgaaacaagcaggagcttagtacaaaccaac
gcagagctgggctgtggcctgcccccacaagtgaagcacgccgaggtccagttctcctca
acaacaccgggctccatggcggtttatatatgccactcaggcttcacgtctgtgcccaga
gccactcagagcatctgtggcatccagggagactggagccagccacccatttgtgaggag
atcaacgaatgcctgtcacagccctgtctcaatggtggtacatgtcggaaccaggtcgga
tcctaccagtgtgagtgtgacgttggcttcagtggacatcgctgtcagacagacataaat
gaatgcctgtcggatccctgcaagcacgggggtacgtgtgaggaccggcctggctcctac
ttgtgtcactgtactcaaggcttcaaaggccaggactgtgaaatagagcaggacgtgtgt
gactccaacccctgtctaaacggtggtgtgtgtcggggttacagacgcaattatttgtgc
gtgtgtaaagacggtttctttggggaccagtgtcagatgttggagaacccatgtgtactg
cagccttgtggaaaccgtggcctctgcaggagtgacaagagaggcaactacaactgcgtt
tgcaaaatcggacacacgggcaaagattgtgagaaagacctgttgcctccctctggtctc
catgtcctgcgtgtggaggaaaacgaggtggagctgcgctgggacgagccagagccgtca
cacagcctggtcagcgggttcctcgtcacttatggtcccctcggcgcgagcgatcaccaa
acagacatgctggataggcagcaatcctcccatgtaatgcgcggcctggtgcccggcctg
ctgtacaacatctccaccttctccatcaaacgtaacaccaacaacaacgacaacagccag
cccgccaccgcactgatacgcaccagacctcagccagtggagcagctgcaggtggagaac
gtgtcctcctcgcaggtgtggctgagctggctggttcaggcggctcatcatgctgcagtc
agcagggtgcacgtgtctctactgccttcagatggcggcgagacacgcactgctgtgctc
aacacgagcaccactgagtacaccttcagctcattactccctggtcagatgtacacagtg
gacgtgttgactcaaagtggaatcagaccagatgagtttccctccaccagccactcagct
ggacccctgactttctggacaaggcctctgccccctcagaacctctctctgtcacatgtg
accactaactcagcactgatcacctggagccgccacccgagaaacgtcccagatggcttt
gtggtcaacgtgacccgagggttgaacaccaggagtcgcttcctgcccaatgggaagtta
ggatcatacaccctacgagaactgacgccaggacaacactactacgtggctctcacgtct
gtgaaaagcacggggcaggaacagatccacagcatacctcaacacttagccttcgctacc
ttgccgatgggggcgagatcagggagaagagagaggccagctggggctggacgcacgcta
cccctgtctcaacctaaggaccagggaggcacaacagacacagagaactcagaggagctg
cccagatacacagaactcatcgacagaaggggaaagataacagccaagttcgctcacatg
cctcgaaaagctattcgacatcggaccaaacctgacccacctataagattagagaagatg
gaagaaacaacaaacaaaatcagccttgcactagaggttcaagaggaaggtttaagaacg
aagcctgagctgccacaggactgccgcagtctgccctgccagaacggggggacgtgtgtg
gacgaaggcgactcctacatctgcgactgcgcaacagggttcaagggcagacagtgtgaa
ttgttgtgccaacgagtgccgcacccctgtacccgtctctactctgaaaccaagagtgtg
cctgtgtgggagggtggagtgtgtcactacctgtacaaaaggacgtacaaagtacagcag
gatgtttgttatcgagagatctgtgaaccgacgcctccaaagaaaagtcagagcagaaga
ataaacagacaacaataa
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