Epinephelus lanceolatus (giant grouper): 117254564
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Entry
117254564 CDS
T07331
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04144
Endocytosis
ely04517
IgSF CAM signaling
ely04530
Tight junction
ely04810
Regulation of actin cytoskeleton
ely05100
Bacterial invasion of epithelial cells
ely05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117254564 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117254564 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
117254564 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117254564 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117254564 (arpc1b)
05100 Bacterial invasion of epithelial cells
117254564 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ely04131
]
117254564 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ely04812
]
117254564 (arpc1b)
Membrane trafficking [BR:
ely04131
]
Others
Actin-binding proteins
Arp2/3 complex
117254564 (arpc1b)
Cytoskeleton proteins [BR:
ely04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
117254564 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_TEP1_2nd
RMC1_N
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117254564
NCBI-ProteinID:
XP_033478808
LinkDB
All DBs
Position
6:complement(29349050..29356172)
Genome browser
AA seq
380 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGAKWTRIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGCCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGAAGQTSTGGGGWVHSVCFSHSGNRLAWTSHDSTVSVAE
GGKTSTVNSLSSETLPLLCVTFITENSLVAAGHDCYPVLFVYDGAKASLTFGGKLDVPKQ
ATQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNQCTKFCTTGMDG
GMGIWDVKSLESAMKNLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccacagtttcctgctggaaccaattagctgccatgcctggaacaaagatcgt
acccagatcgccctgtgccccaacaaccacgaggtccacatctacaagaaggatggggcc
aagtggaccaggatccatgagctgaaggagcacaatggacaggtgacaggtattgactgg
gctccagacagtaaccgtatagttacttgcggagcggaccgtaacgcctatgtgtggacc
ctaaaggagggcacatggaagcccaccctggtcatcctcaggatcaaccgagctgctcgc
tgtgtgaagtggtcgccacgagagaacaagtttgctgtaggcagcggctcacgcctcatc
tccatctgttactttgagcaggaaaacgactggtgggtgtgtaagcacatcaagaagccg
atccgctccaccatcctcagtctggactggcatcccaacaacgtcctgctggctgctgga
tgctgtgacttcaaatgcagggtgttctcagcctacattaaggaggtggaggagaagcct
ggccccaccccctggggcagcaagatgccattcggagagatgttgtttgagtctggtggg
tctggagcagcaggtcaaacctcaactggaggcggcggttgggtgcacagcgtgtgcttc
tcacactccggtaaccgcttggcctggacctcccatgactccactgtgtctgtcgcagag
ggaggcaagaccagcacggtgaacagtctgagctctgagacacttcctttgctgtgtgtc
accttcatcactgagaatagcttagtggcagctggccatgactgttacccagtgctgttt
gtgtacgatggtgccaaagccagcttgacctttgggggcaaactggacgttcctaagcag
gcgacccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgggcctca
gagacccagagcaccgagaaggacctgaacaccctgcacaagaacagcatcagccaaatc
tcagtactggaaggaggacgaaaccagtgcaccaagttctgcaccaccggcatggatgga
gggatgggcatctgggatgtcaagagtctggagtctgcaatgaagaacttaaagatagtc
tga
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