Epinephelus lanceolatus (giant grouper): 117254625
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Entry
117254625 CDS
T07331
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117254625 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ely03019
]
117254625 (exosc1)
Messenger RNA biogenesis [BR:
ely03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117254625 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117254625 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
117254625
NCBI-ProteinID:
XP_033478882
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Position
6:complement(32929597..32934620)
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AA seq
194 aa
AA seq
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MSPMKLCVPGDKLCSVEDCIPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHSKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaagctatgcagtgtagaagactgcatt
cccggcacaggagtgtatctgcggcatggatacatttactcctcactagcaggatacgtg
ctcaggaaaaacgagggagaggagttgccagtgatctctgtggtgagggaaacagaaaca
caactactaccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaaccccagg
ttcgccaaggtccatatactatatgtaggctccacaccgctgaaggaccgcttcagagga
acaatcaggaaagaagatgtgcgcgcaacagagaaagacaaggtggagacatacaaaagc
ttcagaccaggtgacatcgtcttggcgaaagttatatcgctcggtgacgtgcagtctaac
tacctgttgacaacagcagagaatgagctgggcgtggtggtggcacacagtgaagcaggt
gctcagatggttcccatcagctggtgtgaaatgcagtgcccacggacgcacagcaaagag
ttccgtaaagtggcgcgagtgcagccagagtatctacaggcatga
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